RNA–Protein interactions for RNA: YDR109C

YDR109C, Transcript of Putative kinase, yeast

Gene YDR109C, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR109C	YDR109C	MRX9	Q07349	420 aa	Known RBP	5	□□□□□ -1.61
YDR109C	YDR109C	RNH203	Q12338	110 aa		5	□□□□□ -1.61
YDR109C	YDR109C	SAG1	P20840	650 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	ERG3	P32353	365 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	YBR096W	P38256	230 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	QDR1	P40475	563 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	UBP8	P50102	471 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	YPL077C	Q02831	240 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	YDR248C	Q03786	193 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	TGS1	Q12052	315 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	FMP16	Q12497	93 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	HEM4	P06174	275 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	CDC34	P14682	295 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	GLC7	P32598	312 aa	Known RBP	4.99	□□□□□ -1.61
YDR109C	YDR109C	FLO10	P36170	1169 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	PHM8	P40025	321 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	YER079W	P40052	210 aa	Known RBP	4.99	□□□□□ -1.61
YDR109C	YDR109C	GWT1	P47026	490 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	ALG9	P53868	555 aa	Known RBP	4.99	□□□□□ -1.61
YDR109C	YDR109C	API2	Q04413	109 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	USB1	Q12208	290 aa	Known RBP	4.99	□□□□□ -1.61
YDR109C	YDR109C	PRS5	Q12265	496 aa	Known RBP	4.99	□□□□□ -1.61
YDR109C	YDR109C	YJR112W-A	Q3E743	109 aa		4.99	□□□□□ -1.61
YDR109C	YDR109C	TPI1	P00942	248 aa	Known RBP	4.98	□□□□□ -1.61
YDR109C	YDR109C	URA3	P03962	267 aa		4.98	□□□□□ -1.61
YDR109C	YDR109C	RPS31	P05759	152 aa	Known RBP	4.98	□□□□□ -1.61
YDR109C	YDR109C	CPR4	P25334	318 aa		4.98	□□□□□ -1.61
YDR109C	YDR109C	RFA3	P26755	122 aa	Known RBP	4.98	□□□□□ -1.61
YDR109C	YDR109C	TIP1	P27654	210 aa	Predicted RBP	4.98	□□□□□ -1.61
YDR109C	YDR109C	EDS1	P38073	919 aa		4.98	□□□□□ -1.61
YDR109C	YDR109C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
YDR109C	YDR109C	YFL051C	P43552	160 aa		4.98	□□□□□ -1.61
YDR109C	YDR109C	YJR011C	P47086	261 aa	Predicted RBP	4.98	□□□□□ -1.61
YDR109C	YDR109C	ECM27	P47144	725 aa		4.98	□□□□□ -1.61
YDR109C	YDR109C	YJR111C	P47148	283 aa	Known RBP	4.98	□□□□□ -1.61
YDR109C	YDR109C	SIP18	P50263	79 aa		4.98	□□□□□ -1.61
YDR109C	YDR109C	JAC1	P53193	184 aa		4.98	□□□□□ -1.61
YDR109C	YDR109C	GIM3	P53900	129 aa		4.98	□□□□□ -1.61
YDR109C	YDR109C	SUR7	P54003	302 aa		4.98	□□□□□ -1.61
YDR109C	YDR109C	SPR28	Q04921	423 aa		4.98	□□□□□ -1.61
YDR109C	YDR109C	YOR186W	Q08560	144 aa		4.98	□□□□□ -1.61
YDR109C	YDR109C	EAF3	Q12432	401 aa		4.98	□□□□□ -1.61
YDR109C	YDR109C	SEN2	P16658	377 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	SEC22	P22214	214 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	MAK32	P23060	363 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	YCR061W	P25639	631 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	PEX4	P29340	183 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	REC114	P32841	428 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	SRP1	Q02821	542 aa	Known RBP	4.97	□□□□□ -1.61
YDR109C	YDR109C	YDR391C	Q04170	232 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	BBP1	Q12365	385 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	MRS4	P23500	304 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	MRP20	P32387	263 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	STS1	P38637	319 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	COS8	P38723	381 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	ARO9	P38840	513 aa	Predicted RBP	4.97	□□□□□ -1.61
YDR109C	YDR109C	AIM46	P38885	310 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	VMA7	P39111	118 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	YCK3	P39962	524 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	XBP1	P40489	647 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	GNA1	P43577	159 aa	Predicted RBP	4.97	□□□□□ -1.61
YDR109C	YDR109C	LSM1	P47017	172 aa	Known RBP	4.97	□□□□□ -1.61
YDR109C	YDR109C	SSN8	P47821	323 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	SKP1	P52286	194 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	NIF3	P53081	288 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	YIP5	P53108	310 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	HAS1	Q03532	505 aa	Known RBP	4.97	□□□□□ -1.61
YDR109C	YDR109C	DLT1	Q04216	342 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	RTT103	Q05543	409 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	MPD1	Q12404	318 aa	Known RBP	4.97	□□□□□ -1.61
YDR109C	YDR109C	BPH1	P25356	2167 aa		4.97	□□□□□ -1.61
YDR109C	YDR109C	IFM1	P25038	676 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	OCH1	P31755	480 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	SRY1	P36007	326 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	FAT1	P38225	669 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	SEN34	P39707	275 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	YHC3	P47040	408 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	TAD2	P47058	250 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	PRM15	Q03262	622 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	RFU1	Q08003	200 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	YOL118C	Q08259	102 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	RTR2	Q12378	196 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	TFC7	Q12415	435 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	YOR192C-C	Q3E736	78 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	UBA3	Q99344	299 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	RPL25	P04456	142 aa	Known RBP	4.96	□□□□□ -1.62
YDR109C	YDR109C	RPL35A	P0CX84	120 aa	Known RBP	4.96	□□□□□ -1.62
YDR109C	YDR109C	RPL35B	P0CX85	120 aa	Known RBP	4.96	□□□□□ -1.62
YDR109C	YDR109C	TRR1	P29509	319 aa	Known RBP	4.96	□□□□□ -1.62
YDR109C	YDR109C	CLB6	P32943	380 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	YBR197C	P38306	217 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	YIL029C	P40538	142 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	YIR035C	P40579	254 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	CAB5	Q03941	241 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	YDR114C	Q04597	100 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	CRR1	Q05790	422 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	SCP1	Q08873	200 aa		4.96	□□□□□ -1.62
YDR109C	YDR109C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.96	□□□□□ -1.62
YDR109C	YDR109C	RPI1	P23250	407 aa	Known RBP	4.95	□□□□□ -1.62
YDR109C	YDR109C	MIR1	P23641	311 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms