RNA–Protein interactions for RNA: YDR098C-B

YDR098C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR098C-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR098C-BYDR098C-B CUP1-1P0CX80 61 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B CUP1-2P0CX81 61 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B HMRA2P0CY13 119 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B MSK1P32048 576 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B RIB7P33312 244 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B IRS4P36115 615 aaKnown RBP2.35□□□□□ -2.03
YDR098C-BYDR098C-B MRPL4P36517 319 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B PTC7P38797 343 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B YGL176CP46945 554 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B LSC1P53598 329 aaKnown RBP2.35□□□□□ -2.03
YDR098C-BYDR098C-B ATG39Q06159 398 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B FRE6Q12473 712 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B RAS1P01119 309 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B TOM40P23644 387 aaKnown RBP2.35□□□□□ -2.03
YDR098C-BYDR098C-B HSP30P25619 332 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B PPZ2P33329 710 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B CMC1P36064 111 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B PEX7P39108 375 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B RPA14P50106 137 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B MIG2P53035 382 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B PRM8P53174 237 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B RIM8P53179 542 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B TDA7P53882 636 aaPredicted RBP2.35□□□□□ -2.03
YDR098C-BYDR098C-B SLF1Q12034 447 aaKnown RBP2.35□□□□□ -2.03
YDR098C-BYDR098C-B YOS1Q3E834 85 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B NHP6BP11633 99 aaKnown RBP2.35□□□□□ -2.03
YDR098C-BYDR098C-B ACH1P32316 526 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B YEL057CP39983 233 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B YJL163CP46996 555 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B MRX5P47007 382 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B YNL046WP53956 172 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B ADD37Q03233 198 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B MCP1Q12106 302 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B RLM1Q12224 676 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B TAD3Q9URQ3 322 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B RPL20AP0CX23 172 aaKnown RBP2.35□□□□□ -2.03
YDR098C-BYDR098C-B RPL20BP0CX24 172 aaPredicted RBP2.35□□□□□ -2.03
YDR098C-BYDR098C-B ANB1P19211 157 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B EXG1P23776 448 aaKnown RBP2.35□□□□□ -2.03
YDR098C-BYDR098C-B PAD1P33751 242 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
YDR098C-BYDR098C-B SDH4P37298 181 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B ERV15P38312 142 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B COX15P40086 486 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B CWC23P52868 283 aaPredicted RBP2.35□□□□□ -2.03
YDR098C-BYDR098C-B YHC1Q05900 231 aaKnown RBP2.35□□□□□ -2.03
YDR098C-BYDR098C-B STP4Q07351 490 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B ATX2Q12067 313 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B DAD1Q12248 94 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B YOR192C-CQ3E736 78 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B YKL068W-AQ3E826 78 aa2.35□□□□□ -2.03
YDR098C-BYDR098C-B VAR1P02381 398 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B PHO91P27514 894 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B HXT9P40885 567 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B UBX6P47049 396 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B BIO4P53630 237 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B COG5P53951 403 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B HXT11P54862 567 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B ACT1P60010 375 aaKnown RBP2.34□□□□□ -2.03
YDR098C-BYDR098C-B SLT2Q00772 484 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B SIA1Q12212 622 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B YLR146W-AQ2V2P1 62 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B UBA3Q99344 299 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B RPL3P14126 387 aaKnown RBP2.34□□□□□ -2.03
YDR098C-BYDR098C-B SUA5P32579 426 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B APS1P35181 156 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B EFM4P40516 257 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B SNO3P43544 222 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B CTR1P49573 406 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B YGL185CP53100 379 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B GPG1P53130 126 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B CPD1P53314 239 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B HSP31Q04432 237 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B MSC3Q05812 728 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B ARV1Q06541 321 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B ARR3Q06598 404 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B GEP3Q08622 556 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B YOL159C-AQ3E769 90 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B MCM10P32354 571 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B EMP24P32803 203 aaKnown RBP2.34□□□□□ -2.03
YDR098C-BYDR098C-B TES1P41903 349 aaKnown RBP2.34□□□□□ -2.03
YDR098C-BYDR098C-B IMD4P50094 524 aaKnown RBP2.34□□□□□ -2.03
YDR098C-BYDR098C-B JAC1P53193 184 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B UPS3Q04006 179 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B BNA7Q04066 261 aa2.34□□□□□ -2.03
YDR098C-BYDR098C-B YMR310CQ04867 317 aaPredicted RBP2.34□□□□□ -2.03
YDR098C-BYDR098C-B YLR179CQ06252 201 aaKnown RBP2.34□□□□□ -2.03
YDR098C-BYDR098C-B BUD20Q08004 166 aaPredicted RBP2.34□□□□□ -2.03
YDR098C-BYDR098C-B MES1P00958 751 aaKnown RBP2.34□□□□□ -2.04
YDR098C-BYDR098C-B SIR2P06700 562 aa2.34□□□□□ -2.04
YDR098C-BYDR098C-B YEL076C-AP0CX16 216 aa2.34□□□□□ -2.04
YDR098C-BYDR098C-B YLR464WP0CX17 216 aa2.34□□□□□ -2.04
YDR098C-BYDR098C-B TIR1P10863 254 aa2.34□□□□□ -2.04
YDR098C-BYDR098C-B CTA1P15202 515 aa2.34□□□□□ -2.04
YDR098C-BYDR098C-B SNC2P33328 115 aa2.34□□□□□ -2.04
YDR098C-BYDR098C-B UPS2P35200 230 aa2.34□□□□□ -2.04
YDR098C-BYDR098C-B YBR292CP38357 123 aa2.34□□□□□ -2.04
YDR098C-BYDR098C-B YEL076CP39971 216 aa2.34□□□□□ -2.04
YDR098C-BYDR098C-B RBG2P53295 368 aaKnown RBP2.34□□□□□ -2.04
YDR098C-BYDR098C-B YDR209CQ03480 137 aa2.34□□□□□ -2.04
YDR098C-BYDR098C-B AGE1Q04412 482 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 121.4 ms