RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C ANT1Q06497 328 aa0.21□□□□□ -2.38
SSS1YDR086C ARV1Q06541 321 aa0.21□□□□□ -2.38
SSS1YDR086C YLR030WQ07967 263 aa0.21□□□□□ -2.38
SSS1YDR086C YPL257WQ08974 193 aa0.21□□□□□ -2.38
SSS1YDR086C MEI4P29467 408 aa0.2□□□□□ -2.38
SSS1YDR086C TVP38P36164 337 aa0.2□□□□□ -2.38
SSS1YDR086C RRF1P38771 230 aa0.2□□□□□ -2.38
SSS1YDR086C MRX5P47007 382 aa0.2□□□□□ -2.38
SSS1YDR086C YJR056CP47115 236 aa0.2□□□□□ -2.38
SSS1YDR086C YGL159WP53110 370 aa0.2□□□□□ -2.38
SSS1YDR086C PRO2P54885 456 aaKnown RBP0.2□□□□□ -2.38
SSS1YDR086C ATG17Q06410 417 aa0.2□□□□□ -2.38
SSS1YDR086C YCT1Q12235 531 aa0.2□□□□□ -2.38
SSS1YDR086C SWI1P09547 1314 aa0.19□□□□□ -2.38
SSS1YDR086C MSB2P32334 1306 aa0.19□□□□□ -2.38
SSS1YDR086C SPT7P35177 1332 aa0.19□□□□□ -2.38
SSS1YDR086C YSR3P23501 404 aa0.19□□□□□ -2.38
SSS1YDR086C PBN1P25580 416 aa0.19□□□□□ -2.38
SSS1YDR086C MRX3P38172 270 aa0.19□□□□□ -2.38
SSS1YDR086C THO1P40040 218 aaKnown RBP0.19□□□□□ -2.38
SSS1YDR086C YNL217WP40152 326 aa0.19□□□□□ -2.38
SSS1YDR086C MEP1P40260 492 aa0.19□□□□□ -2.38
SSS1YDR086C LSB1P53281 241 aa0.19□□□□□ -2.38
SSS1YDR086C ATG39Q06159 398 aa0.19□□□□□ -2.38
SSS1YDR086C YPR147CQ06522 304 aaKnown RBP0.19□□□□□ -2.38
SSS1YDR086C YPR172WQ06608 200 aa0.19□□□□□ -2.38
SSS1YDR086C AQY2P0CD90 149 aa0.18□□□□□ -2.38
SSS1YDR086C RSR1P13856 272 aa0.18□□□□□ -2.38
SSS1YDR086C VPS3P23643 1011 aa0.18□□□□□ -2.38
SSS1YDR086C YPT52P36018 234 aaKnown RBP0.18□□□□□ -2.38
SSS1YDR086C SOK1P40317 901 aa0.18□□□□□ -2.38
SSS1YDR086C GPI8P49018 411 aa0.18□□□□□ -2.38
SSS1YDR086C BOL2P53082 120 aa0.18□□□□□ -2.38
SSS1YDR086C SAY1P53324 424 aa0.18□□□□□ -2.38
SSS1YDR086C CUS2P53830 285 aaPredicted RBP0.18□□□□□ -2.38
SSS1YDR086C ERV41Q04651 352 aa0.18□□□□□ -2.38
SSS1YDR086C YDL180WQ12301 547 aa0.18□□□□□ -2.38
SSS1YDR086C YNL146C-AQ3E7Z1 64 aa0.18□□□□□ -2.38
SSS1YDR086C YKL070WP36087 169 aa0.17□□□□□ -2.38
SSS1YDR086C GAA1P39012 614 aa0.17□□□□□ -2.38
SSS1YDR086C YAR068WP39564 161 aa0.17□□□□□ -2.38
SSS1YDR086C DDI1P40087 428 aa0.17□□□□□ -2.38
SSS1YDR086C YJR012CP47087 207 aa0.17□□□□□ -2.38
SSS1YDR086C RPL27BP0C2H7 136 aaKnown RBP0.16□□□□□ -2.38
SSS1YDR086C YKR104WP0CE69 306 aa0.16□□□□□ -2.38
SSS1YDR086C MET16P18408 261 aaPredicted RBP0.16□□□□□ -2.38
SSS1YDR086C TFC1P32367 649 aa0.16□□□□□ -2.38
SSS1YDR086C JEN1P36035 616 aa0.16□□□□□ -2.38
SSS1YDR086C MRPL39P36533 70 aa0.16□□□□□ -2.38
SSS1YDR086C RPF1P38805 295 aaKnown RBP0.16□□□□□ -2.38
SSS1YDR086C PGD1P40356 397 aa0.16□□□□□ -2.38
SSS1YDR086C RRP40Q08285 240 aaKnown RBP0.16□□□□□ -2.38
SSS1YDR086C MSA1Q08471 629 aa0.16□□□□□ -2.38
SSS1YDR086C YOR020W-AQ3E824 90 aa0.16□□□□□ -2.38
SSS1YDR086C HTL1Q9URQ5 78 aa0.16□□□□□ -2.38
SSS1YDR086C MET5P47169 1442 aa0.15□□□□□ -2.39
SSS1YDR086C HAM1P47119 197 aaKnown RBP0.15□□□□□ -2.39
SSS1YDR086C AIF1P52923 378 aa0.15□□□□□ -2.39
SSS1YDR086C YDR286CQ05530 114 aa0.15□□□□□ -2.39
SSS1YDR086C GMC2Q06201 188 aa0.15□□□□□ -2.39
SSS1YDR086C YOR186WQ08560 144 aa0.15□□□□□ -2.39
SSS1YDR086C HIS1P00498 297 aaKnown RBP0.14□□□□□ -2.39
SSS1YDR086C CDC8P00572 216 aa0.14□□□□□ -2.39
SSS1YDR086C MEK1P24719 497 aaPredicted RBP0.14□□□□□ -2.39
SSS1YDR086C ECM33P38248 429 aaKnown RBP0.14□□□□□ -2.39
SSS1YDR086C EDC3P39998 551 aaKnown RBP0.14□□□□□ -2.39
SSS1YDR086C SNZ3P43545 298 aa0.14□□□□□ -2.39
SSS1YDR086C RPA43P46669 326 aa0.14□□□□□ -2.39
SSS1YDR086C COQ10Q08058 207 aa0.14□□□□□ -2.39
SSS1YDR086C PGC1Q08959 321 aa0.14□□□□□ -2.39
SSS1YDR086C YBR056W-AI2HB52 66 aa0.13□□□□□ -2.39
SSS1YDR086C IPP1P00817 287 aaKnown RBP0.13□□□□□ -2.39
SSS1YDR086C TRX1P22217 103 aaKnown RBP0.13□□□□□ -2.39
SSS1YDR086C RNA15P25299 296 aaPredicted RBP0.13□□□□□ -2.39
SSS1YDR086C QRI5P32344 111 aa0.13□□□□□ -2.39
SSS1YDR086C OSW5P40219 148 aa0.13□□□□□ -2.39
SSS1YDR086C ERJ5P43613 295 aaPredicted RBP0.13□□□□□ -2.39
SSS1YDR086C GCD14P46959 383 aaPredicted RBP0.13□□□□□ -2.39
SSS1YDR086C FMP33P46998 180 aa0.13□□□□□ -2.39
SSS1YDR086C YAE1P47118 141 aaPredicted RBP0.13□□□□□ -2.39
SSS1YDR086C POP3P53833 195 aaPredicted RBP0.13□□□□□ -2.39
SSS1YDR086C ALG11P53954 548 aaKnown RBP0.13□□□□□ -2.39
SSS1YDR086C SPG4Q04438 115 aa0.13□□□□□ -2.39
SSS1YDR086C LCL2Q08045 131 aa0.13□□□□□ -2.39
SSS1YDR086C MRPL23Q12487 163 aaPredicted RBP0.13□□□□□ -2.39
SSS1YDR086C YHR139C-AO13536 103 aa0.12□□□□□ -2.39
SSS1YDR086C EHD3P28817 500 aa0.12□□□□□ -2.39
SSS1YDR086C BLI1P35727 113 aa0.12□□□□□ -2.39
SSS1YDR086C YHL042WP38729 150 aa0.12□□□□□ -2.39
SSS1YDR086C PEX17P40155 199 aa0.12□□□□□ -2.39
SSS1YDR086C YRB2P40517 327 aa0.12□□□□□ -2.39
SSS1YDR086C YFL065CP43539 102 aa0.12□□□□□ -2.39
SSS1YDR086C ILM1P47155 203 aa0.12□□□□□ -2.39
SSS1YDR086C KAP114P53067 1004 aa0.12□□□□□ -2.39
SSS1YDR086C DOC1P53068 250 aa0.12□□□□□ -2.39
SSS1YDR086C PNC1P53184 216 aaKnown RBP0.12□□□□□ -2.39
SSS1YDR086C NOP13P53883 403 aaKnown RBP RIP-Chip data0.12□□□□□ -2.39not detected
SSS1YDR086C RCE1Q03530 315 aa0.12□□□□□ -2.39
SSS1YDR086C YOL160WQ08321 113 aa0.12□□□□□ -2.39
SSS1YDR086C NIP7Q08962 181 aaKnown RBP0.12□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms