RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	SEI1	Q06058	285 aa		4.31	□□□□□ -1.72
LCB2	YDR062W	DPB2	P24482	689 aa	Predicted RBP	4.3	□□□□□ -1.72
LCB2	YDR062W	CAM1	P29547	415 aa	Known RBP	4.3	□□□□□ -1.72
LCB2	YDR062W	ACP1	P32463	125 aa		4.3	□□□□□ -1.72
LCB2	YDR062W	FES1	P38260	290 aa		4.3	□□□□□ -1.72
LCB2	YDR062W	SEN34	P39707	275 aa		4.3	□□□□□ -1.72
LCB2	YDR062W	YLR177W	Q06251	628 aa		4.3	□□□□□ -1.72
LCB2	YDR062W	YPR147C	Q06522	304 aa	Known RBP	4.3	□□□□□ -1.72
LCB2	YDR062W	TPO4	Q12256	659 aa		4.3	□□□□□ -1.72
LCB2	YDR062W	YER078W-A	Q3E7A2	54 aa		4.3	□□□□□ -1.72
LCB2	YDR062W	SNA3	P14359	133 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	PHO80	P20052	293 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	FRM2	P37261	193 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	SHE1	P38200	338 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	YHL049C	P38722	271 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	PTH1	P38876	190 aa	Known RBP	4.29	□□□□□ -1.72
LCB2	YDR062W	AVT7	P40501	490 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	MMS2	P53152	137 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	RRP40	Q08285	240 aa	Known RBP	4.29	□□□□□ -1.72
LCB2	YDR062W	ASP3-2	P0CX77	362 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	ASP3-3	P0CX78	362 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	ASP3-4	P0CX79	362 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	ASP3-1	P0CZ17	362 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	URA6	P15700	204 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	SPS18	P32572	300 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.29	□□□□□ -1.72	not detected
LCB2	YDR062W	OST3	P48439	350 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	SLX9	P53251	210 aa	Predicted RBP	4.29	□□□□□ -1.72
LCB2	YDR062W	RRP17	Q04031	235 aa	Predicted RBP	4.29	□□□□□ -1.72
LCB2	YDR062W	PBA1	Q05778	276 aa		4.29	□□□□□ -1.72
LCB2	YDR062W	BGL2	P15703	313 aa	Known RBP	4.28	□□□□□ -1.72
LCB2	YDR062W	YCR025C	P25352	136 aa		4.28	□□□□□ -1.72
LCB2	YDR062W	SRP14	P38985	146 aa		4.28	□□□□□ -1.72
LCB2	YDR062W	YMR144W	P40214	342 aa	Known RBP	4.28	□□□□□ -1.72
LCB2	YDR062W	DXO1	Q06349	442 aa		4.28	□□□□□ -1.72
LCB2	YDR062W	IRC25	Q07951	179 aa		4.28	□□□□□ -1.72
LCB2	YDR062W	YNG1	Q08465	219 aa		4.28	□□□□□ -1.72
LCB2	YDR062W	YOR376W	Q08900	122 aa		4.28	□□□□□ -1.72
LCB2	YDR062W	YPL278C	Q08990	100 aa		4.28	□□□□□ -1.72
LCB2	YDR062W	YPL150W	Q12152	901 aa		4.28	□□□□□ -1.72
LCB2	YDR062W	ERV2	Q12284	196 aa		4.28	□□□□□ -1.72
LCB2	YDR062W	CAF4	P36130	643 aa		4.27	□□□□□ -1.73
LCB2	YDR062W	DRE2	P36152	348 aa		4.27	□□□□□ -1.73
LCB2	YDR062W	MRPL39	P36533	70 aa		4.27	□□□□□ -1.73
LCB2	YDR062W	RFT1	P38206	574 aa	Predicted RBP	4.27	□□□□□ -1.73
LCB2	YDR062W	AME1	P38313	324 aa		4.27	□□□□□ -1.73
LCB2	YDR062W	SHG1	P38337	142 aa		4.27	□□□□□ -1.73
LCB2	YDR062W	YER121W	P40076	114 aa		4.27	□□□□□ -1.73
LCB2	YDR062W	STB1	P42845	420 aa		4.27	□□□□□ -1.73
LCB2	YDR062W	TMA22	P47089	198 aa	Predicted RBP	4.27	□□□□□ -1.73
LCB2	YDR062W	TOS8	P53147	276 aa		4.27	□□□□□ -1.73
LCB2	YDR062W	EFM1	P38732	585 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	CPR7	P47103	393 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	PDR17	P53844	350 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	RTC4	P53850	401 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	FMP41	P53889	259 aa	Known RBP	4.26	□□□□□ -1.73
LCB2	YDR062W	RNH201	P53942	307 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	YPL113C	Q02961	396 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	FDH1	Q08911	376 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	MRX4	Q12467	430 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	RPL21B	Q12672	160 aa	Known RBP	4.26	□□□□□ -1.73
LCB2	YDR062W	COX5A	P00424	153 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	QCR2	P07257	368 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	DBF2	P22204	572 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	IMP1	P28627	190 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	TRR1	P29509	319 aa	Known RBP	4.26	□□□□□ -1.73
LCB2	YDR062W	SOL2	P37262	315 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	OXA1	P39952	402 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	COG3	P40094	801 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	YJL016W	P47072	561 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	YNL140C	P53910	189 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	CRZ1	P53968	678 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	YLR460C	P54007	376 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	ELP3	Q02908	557 aa	Known RBP	4.26	□□□□□ -1.73
LCB2	YDR062W	SNO1	Q03144	224 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	HRI1	Q05905	244 aa	Known RBP	4.26	□□□□□ -1.73
LCB2	YDR062W	PPT2	Q12036	173 aa		4.26	□□□□□ -1.73
LCB2	YDR062W	WTM1	Q12363	437 aa	Known RBP	4.26	□□□□□ -1.73
LCB2	YDR062W	GSC2	P40989	1895 aa		4.25	□□□□□ -1.73
LCB2	YDR062W	PUT1	P09368	476 aa		4.25	□□□□□ -1.73
LCB2	YDR062W	CDC50	P25656	391 aa		4.25	□□□□□ -1.73
LCB2	YDR062W	YBL059W	P34224	193 aa		4.25	□□□□□ -1.73
LCB2	YDR062W	SRY1	P36007	326 aa		4.25	□□□□□ -1.73
LCB2	YDR062W	YKE4	P40544	346 aa		4.25	□□□□□ -1.73
LCB2	YDR062W	YFL064C	P43540	174 aa		4.25	□□□□□ -1.73
LCB2	YDR062W	MRH4	P53166	561 aa		4.25	□□□□□ -1.73
LCB2	YDR062W	SYF2	P53277	215 aa	Predicted RBP	4.25	□□□□□ -1.73
LCB2	YDR062W	YMR279C	Q03263	540 aa		4.25	□□□□□ -1.73
LCB2	YDR062W	MET2	P08465	486 aa		4.24	□□□□□ -1.73
LCB2	YDR062W	ZWF1	P11412	505 aa	Known RBP	4.24	□□□□□ -1.73
LCB2	YDR062W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
LCB2	YDR062W	AAT2	P23542	418 aa	Known RBP	4.24	□□□□□ -1.73
LCB2	YDR062W	CAT2	P32796	670 aa	Known RBP	4.24	□□□□□ -1.73
LCB2	YDR062W	DBP7	P36120	742 aa	Known RBP	4.24	□□□□□ -1.73
LCB2	YDR062W	MAK5	P38112	773 aa	Predicted RBP	4.24	□□□□□ -1.73
LCB2	YDR062W	POP8	P38208	133 aa		4.24	□□□□□ -1.73
LCB2	YDR062W	BAT1	P38891	393 aa	Known RBP	4.24	□□□□□ -1.73
LCB2	YDR062W	TIM17	P39515	158 aa		4.24	□□□□□ -1.73
LCB2	YDR062W	REE1	P40893	198 aa		4.24	□□□□□ -1.73
LCB2	YDR062W	NDD1	Q08887	554 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms