RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN4	YDL020C	ATG17	Q06410	417 aa		2.69	□□□□□ -1.98
RPN4	YDL020C	CSM4	Q08955	156 aa		2.69	□□□□□ -1.98
RPN4	YDL020C	ADE6	P38972	1358 aa	Known RBP	2.68	□□□□□ -1.98
RPN4	YDL020C	TOM40	P23644	387 aa	Known RBP	2.68	□□□□□ -1.98
RPN4	YDL020C	EHD3	P28817	500 aa		2.68	□□□□□ -1.98
RPN4	YDL020C	SPT8	P38915	602 aa		2.68	□□□□□ -1.98
RPN4	YDL020C	YER084W	P40057	128 aa		2.68	□□□□□ -1.98
RPN4	YDL020C	YJL144W	P47009	104 aa		2.68	□□□□□ -1.98
RPN4	YDL020C	YJL028W	P47062	111 aa		2.68	□□□□□ -1.98
RPN4	YDL020C	LIA1	P47120	325 aa	Known RBP	2.68	□□□□□ -1.98
RPN4	YDL020C	USE1	P53146	245 aa		2.68	□□□□□ -1.98
RPN4	YDL020C	YGL088W	P53151	121 aa		2.68	□□□□□ -1.98
RPN4	YDL020C	CTF19	Q02732	369 aa		2.68	□□□□□ -1.98
RPN4	YDL020C	FCF1	Q05498	189 aa	Predicted RBP	2.68	□□□□□ -1.98
RPN4	YDL020C	YPR098C	Q06089	161 aa		2.68	□□□□□ -1.98
RPN4	YDL020C	SMT3	Q12306	101 aa	Known RBP	2.68	□□□□□ -1.98
RPN4	YDL020C	DUR1,2	P32528	1835 aa	Known RBP	2.68	□□□□□ -1.98
RPN4	YDL020C	YRF1-2	P40105	1681 aa		2.67	□□□□□ -1.98
RPN4	YDL020C	TDH2	P00358	332 aa	Known RBP	2.67	□□□□□ -1.98
RPN4	YDL020C	KRE1	P17260	313 aa		2.67	□□□□□ -1.98
RPN4	YDL020C	SFC1	P33303	322 aa		2.67	□□□□□ -1.98
RPN4	YDL020C	TEM1	P38987	245 aa		2.67	□□□□□ -1.98
RPN4	YDL020C	BOP2	Q06150	570 aa		2.67	□□□□□ -1.98
RPN4	YDL020C	COQ10	Q08058	207 aa		2.67	□□□□□ -1.98
RPN4	YDL020C	FEX1	Q08913	375 aa		2.67	□□□□□ -1.98
RPN4	YDL020C	FEX2	Q08991	375 aa		2.67	□□□□□ -1.98
RPN4	YDL020C	YPL247C	Q12523	523 aa		2.67	□□□□□ -1.98
RPN4	YDL020C	YPR096C	O13587	100 aa		2.66	□□□□□ -1.98
RPN4	YDL020C	DPB2	P24482	689 aa	Predicted RBP	2.66	□□□□□ -1.98
RPN4	YDL020C	MIG1	P27705	504 aa		2.66	□□□□□ -1.98
RPN4	YDL020C	SDH4	P37298	181 aa		2.66	□□□□□ -1.98
RPN4	YDL020C	YBR096W	P38256	230 aa		2.66	□□□□□ -1.98
RPN4	YDL020C	EMI1	Q04406	187 aa		2.66	□□□□□ -1.98
RPN4	YDL020C	YPR147C	Q06522	304 aa	Known RBP	2.66	□□□□□ -1.98
RPN4	YDL020C	YCT1	Q12235	531 aa		2.66	□□□□□ -1.98
RPN4	YDL020C	YKR104W	P0CE69	306 aa		2.66	□□□□□ -1.98
RPN4	YDL020C	TCP1	P12612	559 aa	Known RBP	2.66	□□□□□ -1.98
RPN4	YDL020C	RSA4	P25382	515 aa	Known RBP	2.66	□□□□□ -1.98
RPN4	YDL020C	YCR016W	P25617	290 aa	Known RBP	2.66	□□□□□ -1.98
RPN4	YDL020C	FZO1	P38297	855 aa		2.66	□□□□□ -1.98
RPN4	YDL020C	SNZ3	P43545	298 aa		2.66	□□□□□ -1.98
RPN4	YDL020C	KRE28	Q04431	385 aa		2.66	□□□□□ -1.98
RPN4	YDL020C	RRS1	Q08746	203 aa	Known RBP	2.66	□□□□□ -1.98
RPN4	YDL020C	AGC1	Q12482	902 aa		2.66	□□□□□ -1.98
RPN4	YDL020C	NOT5	Q12514	560 aa	Predicted RBP	2.66	□□□□□ -1.98
RPN4	YDL020C	YBL008W-A	Q3E821	79 aa		2.66	□□□□□ -1.98
RPN4	YDL020C	RRP5	Q05022	1729 aa	Known RBP	2.65	□□□□□ -1.99
RPN4	YDL020C	RPS24A	P0CX31	135 aa	Known RBP	2.65	□□□□□ -1.99
RPN4	YDL020C	RPS24B	P0CX32	135 aa	Known RBP	2.65	□□□□□ -1.99
RPN4	YDL020C	PRX1	P34227	261 aa	Known RBP	2.65	□□□□□ -1.99
RPN4	YDL020C	MAL32	P38158	584 aa		2.65	□□□□□ -1.99
RPN4	YDL020C	GOS1	P38736	223 aa		2.65	□□□□□ -1.99
RPN4	YDL020C	HOC1	P47124	396 aa		2.65	□□□□□ -1.99
RPN4	YDL020C	JHD2	P47156	728 aa	Predicted RBP	2.65	□□□□□ -1.99
RPN4	YDL020C	MAL12	P53341	584 aa		2.65	□□□□□ -1.99
RPN4	YDL020C	GRX3	Q03835	250 aa		2.65	□□□□□ -1.99
RPN4	YDL020C	SLD7	Q08457	257 aa		2.65	□□□□□ -1.99
RPN4	YDL020C	YPR011C	Q12251	326 aa		2.65	□□□□□ -1.99
RPN4	YDL020C	PST1	Q12355	444 aa		2.65	□□□□□ -1.99
RPN4	YDL020C	SNU23	Q12368	194 aa	Predicted RBP	2.65	□□□□□ -1.99
RPN4	YDL020C	BNI1	P41832	1953 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	YIL177C	P40434	1758 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	YJL225C	P40889	1758 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	RNP1	P32385	249 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	GDH2	P33327	1092 aa	Known RBP	2.64	□□□□□ -1.99
RPN4	YDL020C	SGE1	P33335	543 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	MSN4	P33749	630 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	ECM13	P38195	257 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	LDB7	P38210	180 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
RPN4	YDL020C	PIR5	P46999	287 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	YJR079W	P47126	109 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	MDM34	P53083	459 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	MRH4	P53166	561 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	YGL034C	P53186	121 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	SNZ2	P53824	298 aa		2.64	□□□□□ -1.99
RPN4	YDL020C	MYO5	Q04439	1219 aa	Known RBP	2.64	□□□□□ -1.99
RPN4	YDL020C	DDP1	Q99321	188 aa	Known RBP	2.64	□□□□□ -1.99
RPN4	YDL020C	RAD10	P06838	210 aa		2.63	□□□□□ -1.99
RPN4	YDL020C	PPH21	P23594	369 aa		2.63	□□□□□ -1.99
RPN4	YDL020C	SRB4	P32569	687 aa		2.63	□□□□□ -1.99
RPN4	YDL020C	RHO3	Q00245	231 aa	Known RBP	2.63	□□□□□ -1.99
RPN4	YDL020C	SPG4	Q04438	115 aa		2.63	□□□□□ -1.99
RPN4	YDL020C	YDR124W	Q04608	324 aa		2.63	□□□□□ -1.99
RPN4	YDL020C	SML1	Q04964	104 aa		2.63	□□□□□ -1.99
RPN4	YDL020C	HRT1	Q08273	121 aa		2.63	□□□□□ -1.99
RPN4	YDL020C	RRP40	Q08285	240 aa	Known RBP	2.63	□□□□□ -1.99
RPN4	YDL020C	TY4B-H	P0C2J7	1802 aa		2.63	□□□□□ -1.99
RPN4	YDL020C	TY4B-J	P47024	1803 aa		2.63	□□□□□ -1.99
RPN4	YDL020C	URB1	P34241	1764 aa	Known RBP	2.63	□□□□□ -1.99
RPN4	YDL020C	MRPL39	P36533	70 aa		2.62	□□□□□ -1.99
RPN4	YDL020C	SSH1	P38353	490 aa	Known RBP	2.62	□□□□□ -1.99
RPN4	YDL020C	THO1	P40040	218 aa	Known RBP	2.62	□□□□□ -1.99
RPN4	YDL020C	SYF2	P53277	215 aa	Predicted RBP	2.62	□□□□□ -1.99
RPN4	YDL020C	TLG1	Q03322	224 aa		2.62	□□□□□ -1.99
RPN4	YDL020C	GOT1	Q03554	138 aa		2.62	□□□□□ -1.99
RPN4	YDL020C	YLR283W	Q05867	314 aa		2.62	□□□□□ -1.99
RPN4	YDL020C	GEP5	Q12393	293 aa		2.62	□□□□□ -1.99
RPN4	YDL020C	PDR18	P53756	1333 aa		2.62	□□□□□ -1.99
RPN4	YDL020C	MATALPHA1	P0CY06	175 aa		2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms