RNA–Protein interactions for RNA: YBR005W

RCR1, Transcript of Protein of the ER membrane involved in cell wall chitin deposition, yeast

Gene RCR1, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCR1	YBR005W	YIP1	P53039	248 aa		6.6	□□□□□ -1.35
RCR1	YBR005W	RPL21A	Q02753	160 aa	Known RBP	6.6	□□□□□ -1.35
RCR1	YBR005W	RPL21B	Q12672	160 aa	Known RBP	6.6	□□□□□ -1.35
RCR1	YBR005W	YPL119C-A	Q3E751	87 aa		6.6	□□□□□ -1.35
RCR1	YBR005W	YKL075C	P36083	450 aa		6.59	□□□□□ -1.35
RCR1	YBR005W	ALG14	P38242	237 aa		6.59	□□□□□ -1.35
RCR1	YBR005W	SSZ1	P38788	538 aa	Known RBP	6.59	□□□□□ -1.35
RCR1	YBR005W	SOP4	P39543	234 aa	Predicted RBP	6.59	□□□□□ -1.35
RCR1	YBR005W	VAM3	Q12241	283 aa		6.59	□□□□□ -1.35
RCR1	YBR005W	TAF3	Q12297	353 aa		6.59	□□□□□ -1.35
RCR1	YBR005W	YLR122C	Q12312	125 aa		6.59	□□□□□ -1.35
RCR1	YBR005W	HEM13	P11353	328 aa	Known RBP	6.58	□□□□□ -1.36
RCR1	YBR005W	AST1	P35183	429 aa		6.58	□□□□□ -1.36
RCR1	YBR005W	SLM4	P38247	162 aa		6.58	□□□□□ -1.36
RCR1	YBR005W	YJR056C	P47115	236 aa		6.58	□□□□□ -1.36
RCR1	YBR005W	ERP6	P53198	216 aa		6.58	□□□□□ -1.36
RCR1	YBR005W	YGR054W	P53235	642 aa	Known RBP	6.58	□□□□□ -1.36
RCR1	YBR005W	TMA10	Q06177	86 aa		6.58	□□□□□ -1.36
RCR1	YBR005W	MPD1	Q12404	318 aa	Known RBP	6.58	□□□□□ -1.36
RCR1	YBR005W	PET122	P10355	254 aa		6.57	□□□□□ -1.36
RCR1	YBR005W	ATG22	P25568	528 aa		6.57	□□□□□ -1.36
RCR1	YBR005W	AHC2	P25649	128 aa		6.57	□□□□□ -1.36
RCR1	YBR005W	DOA4	P32571	926 aa		6.57	□□□□□ -1.36
RCR1	YBR005W	RAD23	P32628	398 aa	Known RBP	6.57	□□□□□ -1.36
RCR1	YBR005W	PEP12	P32854	288 aa		6.57	□□□□□ -1.36
RCR1	YBR005W	MKS1	P34072	584 aa		6.57	□□□□□ -1.36
RCR1	YBR005W	PAU24	P38155	120 aa		6.57	□□□□□ -1.36
RCR1	YBR005W	DDI1	P40087	428 aa		6.57	□□□□□ -1.36
RCR1	YBR005W	CCS1	P40202	249 aa	Known RBP	6.57	□□□□□ -1.36
RCR1	YBR005W	SCW4	P53334	386 aa	Known RBP	6.57	□□□□□ -1.36
RCR1	YBR005W	TLG1	Q03322	224 aa		6.57	□□□□□ -1.36
RCR1	YBR005W	YLR283W	Q05867	314 aa		6.57	□□□□□ -1.36
RCR1	YBR005W	NEJ1	Q06148	342 aa		6.57	□□□□□ -1.36
RCR1	YBR005W	ATG17	Q06410	417 aa		6.57	□□□□□ -1.36
RCR1	YBR005W	VMA6	P32366	345 aa	Known RBP	6.56	□□□□□ -1.36
RCR1	YBR005W	MTC7	P32633	139 aa		6.56	□□□□□ -1.36
RCR1	YBR005W	ZRT3	P34240	503 aa		6.56	□□□□□ -1.36
RCR1	YBR005W	HSK3	P69852	69 aa		6.56	□□□□□ -1.36
RCR1	YBR005W	YPL225W	Q08971	146 aa	Known RBP	6.56	□□□□□ -1.36
RCR1	YBR005W	HUT1	Q12520	339 aa		6.56	□□□□□ -1.36
RCR1	YBR005W	YLR358C	O13565	187 aa		6.55	□□□□□ -1.36
RCR1	YBR005W	REP2	P03872	296 aa		6.55	□□□□□ -1.36
RCR1	YBR005W	CDC31	P06704	161 aa	Known RBP	6.55	□□□□□ -1.36
RCR1	YBR005W	RFA3	P26755	122 aa	Known RBP	6.55	□□□□□ -1.36
RCR1	YBR005W	ARO7	P32178	256 aa		6.55	□□□□□ -1.36
RCR1	YBR005W	SFK1	P35735	353 aa		6.55	□□□□□ -1.36
RCR1	YBR005W	MRPL36	P36531	177 aa		6.55	□□□□□ -1.36
RCR1	YBR005W	UMP1	P38293	148 aa		6.55	□□□□□ -1.36
RCR1	YBR005W	VPS71	Q03433	280 aa		6.55	□□□□□ -1.36
RCR1	YBR005W	ORT1	Q12375	292 aa		6.55	□□□□□ -1.36
RCR1	YBR005W	PMU1	P36069	295 aa		6.54	□□□□□ -1.36
RCR1	YBR005W	ECM4	P36156	370 aa		6.54	□□□□□ -1.36
RCR1	YBR005W	PRS4	P38063	326 aa	Predicted RBP	6.54	□□□□□ -1.36
RCR1	YBR005W	NTC20	P38302	140 aa	Predicted RBP	6.54	□□□□□ -1.36
RCR1	YBR005W	SKP1	P52286	194 aa		6.54	□□□□□ -1.36
RCR1	YBR005W	MIX17	Q03667	156 aa		6.54	□□□□□ -1.36
RCR1	YBR005W	DAL4	Q04895	635 aa		6.54	□□□□□ -1.36
RCR1	YBR005W	NOC4	Q06512	552 aa	Predicted RBP	6.54	□□□□□ -1.36
RCR1	YBR005W	QCR7	P00128	127 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	ADE8	P04161	214 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	6.53	□□□□□ -1.36	not detected
RCR1	YBR005W	PEX4	P29340	183 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	ERG2	P32352	222 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	YKL063C	P35725	167 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	YBR285W	P38354	144 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	EGD2	P38879	174 aa	Known RBP	6.53	□□□□□ -1.36
RCR1	YBR005W	NVJ1	P38881	321 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	RTT105	P40063	208 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	MDJ2	P42834	146 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	RPA43	P46669	326 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	ILM1	P47155	203 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	LYS20	P48570	428 aa	Known RBP	6.53	□□□□□ -1.36
RCR1	YBR005W	HNT2	P49775	206 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	STD1	Q02794	444 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	MDM36	Q06820	579 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	LYS21	Q12122	440 aa	Known RBP	6.53	□□□□□ -1.36
RCR1	YBR005W	TRM10	Q12400	293 aa		6.53	□□□□□ -1.36
RCR1	YBR005W	MRPL23	Q12487	163 aa	Predicted RBP	6.53	□□□□□ -1.36
RCR1	YBR005W	COX2	P00410	251 aa		6.52	□□□□□ -1.37
RCR1	YBR005W	CDC34	P14682	295 aa		6.52	□□□□□ -1.37
RCR1	YBR005W	PRE7	P23724	241 aa	Known RBP	6.52	□□□□□ -1.37
RCR1	YBR005W	RNA14	P25298	677 aa	Known RBP	6.52	□□□□□ -1.37
RCR1	YBR005W	YCR061W	P25639	631 aa		6.52	□□□□□ -1.37
RCR1	YBR005W	GAR1	P28007	205 aa	Known RBP	6.52	□□□□□ -1.37
RCR1	YBR005W	PAU2	P32612	120 aa		6.52	□□□□□ -1.37
RCR1	YBR005W	YBR144C	P34215	104 aa		6.52	□□□□□ -1.37
RCR1	YBR005W	AVT6	P40074	448 aa		6.52	□□□□□ -1.37
RCR1	YBR005W	INO2	P26798	304 aa		6.51	□□□□□ -1.37
RCR1	YBR005W	YBL010C	P32788	280 aa		6.51	□□□□□ -1.37
RCR1	YBR005W	SRY1	P36007	326 aa		6.51	□□□□□ -1.37
RCR1	YBR005W	YJL213W	P40896	331 aa		6.51	□□□□□ -1.37
RCR1	YBR005W	MID1	P41821	548 aa		6.51	□□□□□ -1.37
RCR1	YBR005W	GRX5	Q02784	150 aa		6.51	□□□□□ -1.37
RCR1	YBR005W	YMR252C	Q04814	134 aa		6.51	□□□□□ -1.37
RCR1	YBR005W	DGK1	Q12382	290 aa		6.51	□□□□□ -1.37
RCR1	YBR005W	TY1A-NL1	Q12391	440 aa	Known RBP	6.51	□□□□□ -1.37
RCR1	YBR005W	MED11	Q99278	115 aa		6.51	□□□□□ -1.37
RCR1	YBR005W	RPS31	P05759	152 aa	Known RBP	6.5	□□□□□ -1.37
RCR1	YBR005W	OLE1	P21147	510 aa	Known RBP	6.5	□□□□□ -1.37
RCR1	YBR005W	DPB2	P24482	689 aa	Predicted RBP	6.5	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 69 ms