RNA–Protein interactions for RNA: RDN18-2

RDN18-2, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-2, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-2RDN18-2 AVT4P50944 713 aa8.93□□□□□ -0.98
RDN18-2RDN18-2 NSA1P53136 463 aaPredicted RBP8.93□□□□□ -0.98
RDN18-2RDN18-2 MDM30Q05930 598 aa8.93□□□□□ -0.98
RDN18-2RDN18-2 TY1A-DR4O74302 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 YPT1P01123 206 aaKnown RBP8.92□□□□□ -0.98
RDN18-2RDN18-2 RPS16AP0CX51 143 aaKnown RBP8.92□□□□□ -0.98
RDN18-2RDN18-2 RPS16BP0CX52 143 aaKnown RBP8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-AP0CX57 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-PR1P0CX58 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-ORP0CX59 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-PR2P0CX60 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-DR5P0CX65 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-ER2P0CX66 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-GR3P0CX67 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-LR1P0CX68 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-MR2P0CX69 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 MRS4P23500 304 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 IFM1P25038 676 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 LAG1P38703 411 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 YIL169CP40442 995 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 YJR011CP47086 261 aaPredicted RBP8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-JR2P47099 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 ACT1P60010 375 aaKnown RBP8.92□□□□□ -0.98
RDN18-2RDN18-2 HHT1P61830 136 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-DR1Q03856 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 CAC2Q04199 468 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-ML1Q04706 440 aaKnown RBP8.92□□□□□ -0.98
RDN18-2RDN18-2 BER1Q06688 274 aaKnown RBP8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-BRQ12217 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-NL2Q12470 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 TY1A-GR2Q12485 440 aa8.92□□□□□ -0.98
RDN18-2RDN18-2 RPS31P05759 152 aaKnown RBP8.91□□□□□ -0.98
RDN18-2RDN18-2 MIR1P23641 311 aaKnown RBP8.91□□□□□ -0.98
RDN18-2RDN18-2 ERG8P24521 451 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 MID1P41821 548 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 MOB2P43563 287 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 ECO1P43605 281 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 GWT1P47026 490 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 BUL1P48524 976 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 UFD1P53044 361 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 YNL165WP53891 406 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 NUP53Q03790 475 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 THI74Q04083 370 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 TGS1Q12052 315 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 VAM3Q12241 283 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 YLR146W-AQ2V2P1 62 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 VMA9Q3E7B6 73 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 UBA3Q99344 299 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 SSA3P09435 649 aaKnown RBP8.91□□□□□ -0.98
RDN18-2RDN18-2 RPL30P14120 105 aaKnown RBP8.91□□□□□ -0.98
RDN18-2RDN18-2 SRB6P32570 121 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 AGX1P43567 385 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 CAF16P43569 289 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 MCM22P47167 239 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 HOL1P53389 586 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 RSM23Q01163 450 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 YOR032W-AQ8TGS1 66 aa8.91□□□□□ -0.98
RDN18-2RDN18-2 CDC28P00546 298 aaKnown RBP8.9□□□□□ -0.98
RDN18-2RDN18-2 QCR2P07257 368 aa8.9□□□□□ -0.98
RDN18-2RDN18-2 FAT1P38225 669 aa8.9□□□□□ -0.98
RDN18-2RDN18-2 SKP1P52286 194 aa8.9□□□□□ -0.98
RDN18-2RDN18-2 DIG2Q03373 323 aaKnown RBP8.9□□□□□ -0.98
RDN18-2RDN18-2 MRX9Q07349 420 aaKnown RBP8.9□□□□□ -0.98
RDN18-2RDN18-2 Q0142Q9ZZW4 58 aa8.9□□□□□ -0.98
RDN18-2RDN18-2 UBI4P0CG63 381 aaKnown RBP8.89□□□□□ -0.99
RDN18-2RDN18-2 RPL40AP0CH08 128 aaKnown RBP8.89□□□□□ -0.99
RDN18-2RDN18-2 RPL40BP0CH09 128 aaKnown RBP8.89□□□□□ -0.99
RDN18-2RDN18-2 YBR197CP38306 217 aa8.89□□□□□ -0.99
RDN18-2RDN18-2 SRP1Q02821 542 aaKnown RBP8.89□□□□□ -0.99
RDN18-2RDN18-2 YFR010W-AP0C5N0 62 aa8.89□□□□□ -0.99
RDN18-2RDN18-2 MCM1P11746 286 aa8.89□□□□□ -0.99
RDN18-2RDN18-2 YNR048WP53740 393 aa8.89□□□□□ -0.99
RDN18-2RDN18-2 COQ11Q05892 277 aa8.89□□□□□ -0.99
RDN18-2RDN18-2 THI72Q08579 599 aa8.89□□□□□ -0.99
RDN18-2RDN18-2 GAL1P04385 528 aa8.88□□□□□ -0.99
RDN18-2RDN18-2 OLE1P21147 510 aaKnown RBP8.88□□□□□ -0.99
RDN18-2RDN18-2 GNA1P43577 159 aaPredicted RBP8.88□□□□□ -0.99
RDN18-2RDN18-2 SRB7P47822 140 aa8.88□□□□□ -0.99
RDN18-2RDN18-2 TNA1P53322 534 aa8.88□□□□□ -0.99
RDN18-2RDN18-2 CAF40P53829 373 aa8.88□□□□□ -0.99
RDN18-2RDN18-2 ATG4P53867 494 aa8.88□□□□□ -0.99
RDN18-2RDN18-2 FMP41P53889 259 aaKnown RBP8.88□□□□□ -0.99
RDN18-2RDN18-2 VPS28Q02767 242 aa8.88□□□□□ -0.99
RDN18-2RDN18-2 YDR209CQ03480 137 aa8.88□□□□□ -0.99
RDN18-2RDN18-2 YDL086WQ07505 273 aa8.88□□□□□ -0.99
RDN18-2RDN18-2 YCT1Q12235 531 aa8.88□□□□□ -0.99
RDN18-2RDN18-2 TDH3P00359 332 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
RDN18-2RDN18-2 COQ2P32378 372 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 REC114P32841 428 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 SWD2P36104 329 aaPredicted RBP8.87□□□□□ -0.99
RDN18-2RDN18-2 GPI16P38875 610 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 RFC2P40348 353 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 YIL024CP40543 189 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 SKO1Q02100 647 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 PCC1Q3E833 88 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 ZRC1P20107 442 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 PEX4P29340 183 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 EDS1P38073 919 aa8.87□□□□□ -0.99
RDN18-2RDN18-2 AIR1P40507 360 aaKnown RBP8.87□□□□□ -0.99
RDN18-2RDN18-2 EMC5P40540 141 aa8.87□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 74.1 ms