RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PLVAPQ9BX97 442 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 DNAJC17Q9NVM6 304 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 MAP3K20Q9NYL2 800 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 CTDP1Q9Y5B0 961 aaPredicted RBP21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 GCNT1Q02742 428 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 OTUD6AQ7L8S5 288 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 CROCCP2Q86T23 111 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 NLRX1Q86UT6 975 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 CCDC197Q8NCU1 140 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 SLCO2A1Q92959 643 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 KLC4Q9NSK0 619 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 DOCK5Q9H7D0 1870 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 SORBS3O60504 671 aa21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 BAATQ14032 418 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 TAS1R3Q7RTX0 852 aa21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 USP37Q86T82 979 aa21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 EXOC3L1Q86VI1 746 aa21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 ZBED3Q96IU2 234 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 CEP89Q96ST8 783 aa21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 RPAP3Q9H6T3 665 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 C1orf112Q9NSG2 853 aa21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 WHRNQ9P202 907 aa21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 MYPNQ86TC9 1320 aa21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 KIAA1217Q5T5P2 1943 aa21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 O00370 1275 aa21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 MFSD5Q6N075 450 aa21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 TRMT10CQ7L0Y3 403 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 HAUS2Q9NVX0 235 aa21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 R3HDM2Q9Y2K5 976 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-225ENST00000600733 STBD1O95210 358 aa21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 IVDP26440 423 aa21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 WNT7BP56706 349 aa21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 CNGA2Q16280 664 aa21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 LACTB2Q53H82 288 aaPredicted RBP21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 SWSAP1Q6NVH7 229 aa21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 RHBDF2Q6PJF5 856 aa21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 SAMD3Q8N6K7 520 aa21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 AGBL3Q8NEM8 1001 aa21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 STMN4Q9H169 189 aaPredicted RBP21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 XPNPEP1Q9NQW7 623 aa21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 RGPD3A6NKT7 1758 aaPredicted RBP21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 RGPD4Q7Z3J3 1758 aa21.58■■□□□ 1.05
SHKBP1-225ENST00000600733 ARID2Q68CP9 1835 aa21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 FOXO6A8MYZ6 492 aa21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 VIMP08670 466 aaKnown RBP21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 CREB1P16220 341 aa21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 VPS41P49754 854 aa21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 BRDTQ58F21 947 aaPredicted RBP21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 SPOPLQ6IQ16 392 aa21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 ATG4CQ96DT6 458 aa21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 FAM118BQ9BPY3 351 aa21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 ELAC2Q9BQ52 826 aaKnown RBP21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 HEMGNQ9BXL5 484 aa21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 CTNNAL1Q9UBT7 734 aa21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 SEPT9Q9UHD8 586 aaPredicted RBP21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 ZNRF3Q9ULT6 936 aa21.58■■□□□ 1.04
SHKBP1-225ENST00000600733 ASAP2O43150 1006 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 NR3C2P08235 984 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 CFHP08603 1231 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 SSTR3P32745 418 aaPredicted RBP21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 ITGA8P53708 1063 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 CXCL9Q07325 125 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 LRRC14Q15048 493 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 C15orf39Q6ZRI6 1047 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 ENOSF1Q7L5Y1 443 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 TAOK1Q7L7X3 1001 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 PIGWQ7Z7B1 504 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 VSIG10LQ86VR7 867 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 DDX27Q96GQ7 796 aaKnown RBP21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 SNF8Q96H20 258 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 PWWP2AQ96N64 755 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 KDM4CQ9H3R0 1056 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 C17orf75Q9HAS0 396 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 RNF146Q9NTX7 359 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 VWA5AO00534 786 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 ZBED4O75132 1171 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 EGFRP00533 1210 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 SWT1Q5T5J6 900 aaKnown RBP21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 MGARPQ8TDB4 240 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 IPO4Q8TEX9 1081 aaKnown RBP21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 TEPSINQ96N21 525 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 DCLK3Q9C098 648 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 CCDC134Q9H6E4 229 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 MYOZ2Q9NPC6 264 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 AVENQ9NQS1 362 aaPredicted RBP21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 PCDHB2Q9Y5E7 798 aa21.57■■□□□ 1.04
SHKBP1-225ENST00000600733 UTRNP46939 3433 aa21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 CCT8L1PA6NM43 557 aa21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 ITIH2P19823 946 aa21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 GARTP22102 1010 aa21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 CCND2P30279 289 aa21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 NSFP46459 744 aaKnown RBP21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 PASD1Q8IV76 773 aa21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 CCDC50Q8IVM0 306 aa21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 NIM1KQ8IY84 436 aa21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 FUKQ8N0W3 1084 aa21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 ANKS4BQ8N8V4 417 aa21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 RDM1Q8NG50 284 aa21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 ATP6V0A1Q93050 837 aa21.56■■□□□ 1.04
SHKBP1-225ENST00000600733 ROPN1BQ9BZX4 212 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms