RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 PRKD2Q9BZL6 878 aa20.37■□□□□ 0.85
CPNE7-209ENST00000568977 SLC38A7Q9NVC3 462 aa20.37■□□□□ 0.85
CPNE7-209ENST00000568977 KCNG1Q9UIX4 513 aa20.37■□□□□ 0.85
CPNE7-209ENST00000568977 DOCK6Q96HP0 2047 aa20.37■□□□□ 0.85
CPNE7-209ENST00000568977 WDFY4Q6ZS81 3184 aa20.36■□□□□ 0.85
CPNE7-209ENST00000568977 NPHP3-ACAD11A0A0J9YXS1 232 aa20.36■□□□□ 0.85
CPNE7-209ENST00000568977 VPS37CA5D8V6 355 aaPredicted RBP20.36■□□□□ 0.85
CPNE7-209ENST00000568977 ADAM12O43184 909 aa20.36■□□□□ 0.85
CPNE7-209ENST00000568977 FGFR3P22607 806 aa20.36■□□□□ 0.85
CPNE7-209ENST00000568977 UBA7P41226 1012 aa20.36■□□□□ 0.85
CPNE7-209ENST00000568977 NOLC1Q14978 699 aaKnown RBP eCLIP20.36■□□□□ 0.851e-5■□□□□ 10.6
CPNE7-209ENST00000568977 LIN9Q5TKA1 542 aa20.36■□□□□ 0.85
CPNE7-209ENST00000568977 CD300LGQ6UXG3 332 aa20.36■□□□□ 0.85
CPNE7-209ENST00000568977 LRRC15Q8TF66 581 aa20.36■□□□□ 0.85
CPNE7-209ENST00000568977 ZBTB45Q96K62 511 aaPredicted RBP20.36■□□□□ 0.85
CPNE7-209ENST00000568977 ZMAT2Q96NC0 199 aaKnown RBP20.36■□□□□ 0.85
CPNE7-209ENST00000568977 ACAP3Q96P50 834 aa20.36■□□□□ 0.85
CPNE7-209ENST00000568977 LARSQ9P2J5 1176 aaKnown RBP20.36■□□□□ 0.85
CPNE7-209ENST00000568977 MTRRQ9UBK8 725 aa20.36■□□□□ 0.85
CPNE7-209ENST00000568977 TOM1L1O75674 476 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 KCNE1P15382 129 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 AVPR2P30518 371 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 BRCC3P46736 316 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 NCKAP1LP55160 1127 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 GRIN1Q05586 938 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 TDGQ13569 410 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 SF3A1Q15459 793 aaKnown RBP20.35■□□□□ 0.85
CPNE7-209ENST00000568977 ARSHQ5FYA8 562 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 ZPBP2Q6X784 338 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 GET4Q7L5D6 327 aaPredicted RBP20.35■□□□□ 0.85
CPNE7-209ENST00000568977 GPBP1Q86WP2 473 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 DDX27Q96GQ7 796 aaKnown RBP20.35■□□□□ 0.85
CPNE7-209ENST00000568977 MYADMQ96S97 322 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 PRRX2Q99811 253 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 REEP2Q9BRK0 252 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 KCNK12Q9HB15 430 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 CNTN3Q9P232 1028 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 ODF2LQ9ULJ1 636 aa20.35■□□□□ 0.85
CPNE7-209ENST00000568977 I3L4J1 428 aa20.34■□□□□ 0.85
CPNE7-209ENST00000568977 MEFVO15553 781 aaPredicted RBP20.34■□□□□ 0.85
CPNE7-209ENST00000568977 TRAPPC3O43617 180 aa20.34■□□□□ 0.85
CPNE7-209ENST00000568977 C8AP07357 584 aa20.34■□□□□ 0.85
CPNE7-209ENST00000568977 PLCG1P19174 1290 aa20.34■□□□□ 0.85
CPNE7-209ENST00000568977 TKTP29401 623 aaKnown RBP20.34■□□□□ 0.85
CPNE7-209ENST00000568977 LONP1P36776 959 aaKnown RBP20.34■□□□□ 0.85
CPNE7-209ENST00000568977 KARSQ15046 597 aaKnown RBP20.34■□□□□ 0.85
CPNE7-209ENST00000568977 RASSF8Q8NHQ8 419 aa20.34■□□□□ 0.85
CPNE7-209ENST00000568977 BLOC1S4Q9NUP1 217 aa20.34■□□□□ 0.85
CPNE7-209ENST00000568977 IGSF9Q9P2J2 1179 aa20.34■□□□□ 0.85
CPNE7-209ENST00000568977 EPS15L1Q9UBC2 864 aa20.34■□□□□ 0.85
CPNE7-209ENST00000568977 DUSP12Q9UNI6 340 aa20.34■□□□□ 0.85
CPNE7-209ENST00000568977 H0YCG3 227 aa20.33■□□□□ 0.85
CPNE7-209ENST00000568977 PODXLO00592 558 aa20.33■□□□□ 0.85
CPNE7-209ENST00000568977 PDCP20941 246 aa20.33■□□□□ 0.85
CPNE7-209ENST00000568977 OR1D2P34982 312 aa20.33■□□□□ 0.85
CPNE7-209ENST00000568977 PTPN5P54829 565 aa20.33■□□□□ 0.85
CPNE7-209ENST00000568977 RAB33AQ14088 237 aa20.33■□□□□ 0.85
CPNE7-209ENST00000568977 DHX8Q14562 1220 aaKnown RBP20.33■□□□□ 0.85
CPNE7-209ENST00000568977 SEZ6Q53EL9 994 aa20.33■□□□□ 0.85
CPNE7-209ENST00000568977 PPM1LQ5SGD2 360 aa20.33■□□□□ 0.85
CPNE7-209ENST00000568977 BICD1Q96G01 975 aa20.33■□□□□ 0.85
CPNE7-209ENST00000568977 CACNA1HO95180 2353 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 K7ENM7 598 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 CLDN3O15551 220 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 FAM13AO94988 1023 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 HNRNPA1P09651 372 aaKnown RBP eCLIP20.32■□□□□ 0.84
CPNE7-209ENST00000568977 HOXA9P31269 272 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 MCL1Q07820 350 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 TCF15Q12870 199 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 RSPO2Q6UXX9 243 aaPredicted RBP20.32■□□□□ 0.84
CPNE7-209ENST00000568977 ANKS3Q6ZW76 656 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 HAUS6Q7Z4H7 955 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 SLC7A14Q8TBB6 771 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 RAD54LQ92698 747 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 KCNN1Q92952 543 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 C18orf25Q96B23 403 aaPredicted RBP20.32■□□□□ 0.84
CPNE7-209ENST00000568977 BACE2Q9Y5Z0 518 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 CDY1Q9Y6F8 540 aa20.32■□□□□ 0.84
CPNE7-209ENST00000568977 CXCL8P10145 99 aa20.31■□□□□ 0.84
CPNE7-209ENST00000568977 MATR3P43243 847 aaKnown RBP eCLIP20.31■□□□□ 0.84
CPNE7-209ENST00000568977 ZNF131P52739 623 aa20.31■□□□□ 0.84
CPNE7-209ENST00000568977 MCM6Q14566 821 aa20.31■□□□□ 0.84
CPNE7-209ENST00000568977 SLC10A6Q3KNW5 377 aa20.31■□□□□ 0.84
CPNE7-209ENST00000568977 GRASPQ7Z6J2 395 aaPredicted RBP20.31■□□□□ 0.84
CPNE7-209ENST00000568977 ALYREFQ86V81 257 aaKnown RBP20.31■□□□□ 0.84
CPNE7-209ENST00000568977 RSAD2Q8WXG1 361 aa20.31■□□□□ 0.84
CPNE7-209ENST00000568977 HAPLN2Q9GZV7 340 aa20.31■□□□□ 0.84
CPNE7-209ENST00000568977 MFSD1Q9H3U5 465 aa20.31■□□□□ 0.84
CPNE7-209ENST00000568977 PARVGQ9HBI0 331 aa20.31■□□□□ 0.84
CPNE7-209ENST00000568977 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.31■□□□□ 0.84
CPNE7-209ENST00000568977 NUB1Q9Y5A7 615 aa20.31■□□□□ 0.84
CPNE7-209ENST00000568977 HNRNPDLO14979 420 aaKnown RBP20.3■□□□□ 0.84
CPNE7-209ENST00000568977 CCL16O15467 120 aa20.3■□□□□ 0.84
CPNE7-209ENST00000568977 NARSO43776 548 aaKnown RBP20.3■□□□□ 0.84
CPNE7-209ENST00000568977 KRT18P05783 430 aaKnown RBP20.3■□□□□ 0.84
CPNE7-209ENST00000568977 FSHRP23945 695 aa20.3■□□□□ 0.84
CPNE7-209ENST00000568977 RPL9P32969 192 aaKnown RBP20.3■□□□□ 0.84
CPNE7-209ENST00000568977 LIG4P49917 911 aa20.3■□□□□ 0.84
CPNE7-209ENST00000568977 RESTQ13127 1097 aa20.3■□□□□ 0.84
CPNE7-209ENST00000568977 VARS2Q5ST30 1063 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms