RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ECM1Q16610 540 aa14.26□□□□□ -0.13
SF3B3-202ENST00000562722 UVSSAQ2YD98 709 aa14.26□□□□□ -0.13
SF3B3-202ENST00000562722 ANKS3Q6ZW76 656 aa14.26□□□□□ -0.13
SF3B3-202ENST00000562722 C1orf210Q8IVY1 113 aa14.26□□□□□ -0.13
SF3B3-202ENST00000562722 LLPHQ9BRT6 129 aaKnown RBP14.26□□□□□ -0.13
SF3B3-202ENST00000562722 TCHPQ9BT92 498 aa14.26□□□□□ -0.13
SF3B3-202ENST00000562722 SEMA4AQ9H3S1 761 aa14.26□□□□□ -0.13
SF3B3-202ENST00000562722 PPP4R2Q9NY27 417 aa14.26□□□□□ -0.13
SF3B3-202ENST00000562722 DNMT3BQ9UBC3 853 aaKnown RBP14.26□□□□□ -0.13
SF3B3-202ENST00000562722 TNFSF13BQ9Y275 285 aa14.26□□□□□ -0.13
SF3B3-202ENST00000562722 MRPS23Q9Y3D9 190 aaKnown RBP14.26□□□□□ -0.13
SF3B3-202ENST00000562722 STK24Q9Y6E0 443 aa14.26□□□□□ -0.13
SF3B3-202ENST00000562722 CFAP54Q96N23 3096 aa14.26□□□□□ -0.13
SF3B3-202ENST00000562722 PHLPP2Q6ZVD8 1323 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 SMIM28A0A1B0GU29 152 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 KANSL1LA0AUZ9 987 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 PRRG1O14668 218 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 LRRN2O75325 713 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 LRG1P02750 347 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 SP9P0CG40 484 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 HARSP12081 509 aaKnown RBP14.25□□□□□ -0.13
SF3B3-202ENST00000562722 IGFBP6P24592 240 aaPredicted RBP14.25□□□□□ -0.13
SF3B3-202ENST00000562722 ELF1P32519 619 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 TRAPPC10P48553 1259 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 ARPP19P56211 112 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 STARD6P59095 220 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 HMGN5P82970 282 aaKnown RBP14.25□□□□□ -0.13
SF3B3-202ENST00000562722 PFKPQ01813 784 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 MLF2Q15773 248 aaPredicted RBP14.25□□□□□ -0.13
SF3B3-202ENST00000562722 UPP1Q16831 310 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 NPAS3Q8IXF0 933 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 CEP120Q8N960 986 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 FBXO18Q8NFZ0 1043 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 DDX27Q96GQ7 796 aaKnown RBP14.25□□□□□ -0.13
SF3B3-202ENST00000562722 MRPL4Q9BYD3 311 aaKnown RBP14.25□□□□□ -0.13
SF3B3-202ENST00000562722 BCO2Q9BYV7 579 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 CDT1Q9H211 546 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 SLC38A7Q9NVC3 462 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 SPATA6Q9NWH7 488 aaPredicted RBP14.25□□□□□ -0.13
SF3B3-202ENST00000562722 DLGAP2Q9P1A6 1054 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 DAXXQ9UER7 740 aaPredicted RBP14.25□□□□□ -0.13
SF3B3-202ENST00000562722 KCNH3Q9ULD8 1083 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 DNM3Q9UQ16 869 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 NUB1Q9Y5A7 615 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 BACE2Q9Y5Z0 518 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 DOCK8Q8NF50 2099 aa14.25□□□□□ -0.13
SF3B3-202ENST00000562722 PODXLO00592 558 aa14.24□□□□□ -0.13
SF3B3-202ENST00000562722 HIP1RO75146 1068 aa14.24□□□□□ -0.13
SF3B3-202ENST00000562722 POU2F2P09086 479 aa14.24□□□□□ -0.13
SF3B3-202ENST00000562722 GRM5P41594 1212 aa14.24□□□□□ -0.13
SF3B3-202ENST00000562722 NPTX2P47972 431 aa14.24□□□□□ -0.13
SF3B3-202ENST00000562722 PRKCQQ04759 706 aa14.24□□□□□ -0.13
SF3B3-202ENST00000562722 ZRSR1Q15695 479 aaKnown RBP14.24□□□□□ -0.13
SF3B3-202ENST00000562722 SLC44A4Q53GD3 710 aa14.24□□□□□ -0.13
SF3B3-202ENST00000562722 KRT79Q5XKE5 535 aa14.24□□□□□ -0.13
SF3B3-202ENST00000562722 RSPO2Q6UXX9 243 aaPredicted RBP14.24□□□□□ -0.13
SF3B3-202ENST00000562722 C3orf58Q8NDZ4 430 aa14.24□□□□□ -0.13
SF3B3-202ENST00000562722 MCRS1Q96EZ8 462 aa14.24□□□□□ -0.13
SF3B3-202ENST00000562722 KMT5AQ9NQR1 393 aa14.24□□□□□ -0.13
SF3B3-202ENST00000562722 FAM170BA6NMN3 283 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 E9PMD0 336 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 LAMTOR5O43504 91 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 RHOP08100 348 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 GLULP15104 373 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 ROR1Q01973 937 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 SOX4Q06945 474 aaPredicted RBP14.23□□□□□ -0.13
SF3B3-202ENST00000562722 PTGDRQ13258 359 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 PDIA5Q14554 519 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 VARS2Q5ST30 1063 aaKnown RBP14.23□□□□□ -0.13
SF3B3-202ENST00000562722 RTL10Q7L3V2 364 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 ERMP1Q7Z2K6 904 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 KIAA2013Q8IYS2 634 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 ZSCAN31Q96LW9 406 aaPredicted RBP14.23□□□□□ -0.13
SF3B3-202ENST00000562722 DRC1Q96MC2 740 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 ACAP3Q96P50 834 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 ACO2Q99798 780 aaKnown RBP14.23□□□□□ -0.13
SF3B3-202ENST00000562722 TARS2Q9BW92 718 aaKnown RBP14.23□□□□□ -0.13
SF3B3-202ENST00000562722 CYP4F11Q9HBI6 524 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 RIF1Q5UIP0 2472 aaKnown RBP14.23□□□□□ -0.13
SF3B3-202ENST00000562722 FAM186AA6NE01 2351 aa14.23□□□□□ -0.13
SF3B3-202ENST00000562722 PP2D1A8MPX8 630 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 H7C4K7 107 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 SEC24BO95487 1268 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 PTPN2P17706 415 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 CD72P21854 359 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 SLC5A9Q2M3M2 681 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 CD300LGQ6UXG3 332 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 TPRG1Q6ZUI0 275 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 C4orf32Q8N8J7 132 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 IGSF22Q8N9C0 903 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 ZNF461Q8TAF7 563 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 CORO1BQ9BR76 489 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 RUSC1Q9BVN2 902 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 TMEM134Q9H6X4 195 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 GDE1Q9NZC3 331 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 ANKFY1Q9P2R3 1169 aa14.22□□□□□ -0.13
SF3B3-202ENST00000562722 MTF2Q9Y483 593 aaPredicted RBP14.22□□□□□ -0.13
SF3B3-202ENST00000562722 RBM19Q9Y4C8 960 aaKnown RBP14.22□□□□□ -0.13
SF3B3-202ENST00000562722 VWA8A3KMH1 1905 aa14.21□□□□□ -0.13
SF3B3-202ENST00000562722 WDR27A2RRH5 827 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms