RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 EDEM3Q9BZQ6 932 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 KIAA1586Q9HCI6 787 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 SNTG2Q9NY99 539 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 MAPK13O15264 365 aa17.92■□□□□ 0.46
TPM1-219ENST00000559397 MEFVO15553 781 aaPredicted RBP17.92■□□□□ 0.46
TPM1-219ENST00000559397 EFCAB14O75071 495 aa17.92■□□□□ 0.46
TPM1-219ENST00000559397 FGBP02675 491 aa17.92■□□□□ 0.46
TPM1-219ENST00000559397 AFPP02771 609 aaKnown RBP17.92■□□□□ 0.46
TPM1-219ENST00000559397 ACTN1P12814 892 aa17.92■□□□□ 0.46
TPM1-219ENST00000559397 MAGEA10P43363 369 aaPredicted RBP17.92■□□□□ 0.46
TPM1-219ENST00000559397 OSTNP61366 133 aa17.92■□□□□ 0.46
TPM1-219ENST00000559397 ZBED6P86452 979 aa17.92■□□□□ 0.46
TPM1-219ENST00000559397 OTOP2Q7RTS6 562 aa17.92■□□□□ 0.46
TPM1-219ENST00000559397 ELAC1Q9H777 363 aaKnown RBP17.92■□□□□ 0.46
TPM1-219ENST00000559397 FRMD4BQ9Y2L6 1034 aa17.92■□□□□ 0.46
TPM1-219ENST00000559397 MEIS3P2A8K0S8 358 aa17.91■□□□□ 0.46
TPM1-219ENST00000559397 ADRB2P07550 413 aa17.91■□□□□ 0.46
TPM1-219ENST00000559397 CLTAP09496 248 aa17.91■□□□□ 0.46
TPM1-219ENST00000559397 POU5F1Q01860 360 aaKnown RBP17.91■□□□□ 0.46
TPM1-219ENST00000559397 ENOX2Q16206 610 aaKnown RBP17.91■□□□□ 0.46
TPM1-219ENST00000559397 SNRNP35Q16560 246 aaKnown RBP17.91■□□□□ 0.46
TPM1-219ENST00000559397 RDH13Q8NBN7 331 aa17.91■□□□□ 0.46
TPM1-219ENST00000559397 PCMTD1Q96MG8 357 aaPredicted RBP17.91■□□□□ 0.46
TPM1-219ENST00000559397 ACAP3Q96P50 834 aa17.91■□□□□ 0.46
TPM1-219ENST00000559397 CCDC94Q9BW85 323 aaPredicted RBP17.91■□□□□ 0.46
TPM1-219ENST00000559397 CITO14578 2027 aa17.91■□□□□ 0.46
TPM1-219ENST00000559397 ANK1P16157 1881 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 ZNF233A6NK53 670 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 RECQL4O94761 1208 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 EOMESO95936 686 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 AKAP5P24588 427 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 WDR5P61964 334 aaKnown RBP17.9■□□□□ 0.46
TPM1-219ENST00000559397 MEA1Q16626 185 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 AGMOQ6ZNB7 445 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 TMTC1Q8IUR5 882 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 BRSK2Q8IWQ3 736 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 HERVK_113Q902F9 699 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 LPPQ93052 612 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 PGBD4Q96DM1 585 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 MFSD14AQ96MC6 490 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 APOL6Q9BWW8 343 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 MMRN2Q9H8L6 949 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 TMEM161AQ9NX61 479 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 PTPRSQ13332 1948 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 GTPBP10A4D1E9 387 aaKnown RBP17.9■□□□□ 0.46
TPM1-219ENST00000559397 USP27XA6NNY8 438 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 H0YGN5 161 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 EPHB6O15197 1021 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 OFD1O75665 1012 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 CXCL8P10145 99 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 ITGA4P13612 1032 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 SLC10A6Q3KNW5 377 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 DPY19L2P1Q6NXN4 242 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 ALKAL1Q6UXT8 129 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 HACE1Q8IYU2 909 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 RPF1Q9H9Y2 349 aaKnown RBP17.9■□□□□ 0.46
TPM1-219ENST00000559397 RNF19AQ9NV58 838 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 RBAKQ9NYW8 714 aaPredicted RBP17.9■□□□□ 0.46
TPM1-219ENST00000559397 GIT1Q9Y2X7 761 aa17.9■□□□□ 0.46
TPM1-219ENST00000559397 TRIP11Q15643 1979 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 RALGAPA2Q2PPJ7 1873 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 NOL4O94818 638 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 HNRNPH3P31942 346 aaKnown RBP17.89■□□□□ 0.45
TPM1-219ENST00000559397 WNT7BP56706 349 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 DEFB103AP81534 67 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 CYP24A1Q07973 514 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 HSP90AA2PQ14568 343 aaPredicted RBP17.89■□□□□ 0.45
TPM1-219ENST00000559397 WDR59Q6PJI9 974 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 CYP26C1Q6V0L0 522 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 RAD9BQ6WBX8 426 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 NEK11Q8NG66 645 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 TOP1MTQ969P6 601 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 CXCL16Q9H2A7 254 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 FAM207AQ9NSI2 230 aaPredicted RBP17.89■□□□□ 0.45
TPM1-219ENST00000559397 PARP2Q9UGN5 583 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 PCDHB7Q9Y5E2 793 aa17.89■□□□□ 0.45
TPM1-219ENST00000559397 SOWAHDA6NJG2 315 aa17.88■□□□□ 0.45
TPM1-219ENST00000559397 IBSPP21815 317 aaPredicted RBP17.88■□□□□ 0.45
TPM1-219ENST00000559397 CDK17Q00537 523 aa17.88■□□□□ 0.45
TPM1-219ENST00000559397 XKR4Q5GH76 650 aa17.88■□□□□ 0.45
TPM1-219ENST00000559397 DCAF17Q5H9S7 520 aaPredicted RBP17.88■□□□□ 0.45
TPM1-219ENST00000559397 RASIP1Q5U651 963 aa17.88■□□□□ 0.45
TPM1-219ENST00000559397 INTS8Q75QN2 995 aaKnown RBP17.88■□□□□ 0.45
TPM1-219ENST00000559397 NPAS4Q8IUM7 802 aa17.88■□□□□ 0.45
TPM1-219ENST00000559397 RNF169Q8NCN4 708 aa17.88■□□□□ 0.45
TPM1-219ENST00000559397 ZNF397Q8NF99 534 aaPredicted RBP17.88■□□□□ 0.45
TPM1-219ENST00000559397 PLEKHO2Q8TD55 490 aa17.88■□□□□ 0.45
TPM1-219ENST00000559397 BAP1Q92560 729 aa17.88■□□□□ 0.45
TPM1-219ENST00000559397 SNX27Q96L92 541 aa17.88■□□□□ 0.45
TPM1-219ENST00000559397 GDF15Q99988 308 aa17.88■□□□□ 0.45
TPM1-219ENST00000559397 UBN1Q9NPG3 1134 aa17.88■□□□□ 0.45
TPM1-219ENST00000559397 PLCB1Q9NQ66 1216 aa17.88■□□□□ 0.45
TPM1-219ENST00000559397 CXXC1Q9P0U4 656 aaPredicted RBP17.88■□□□□ 0.45
TPM1-219ENST00000559397 LACTBL1A8MY62 500 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 CCP110O43303 1012 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 AMHP03971 560 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 YARSP54577 528 aaKnown RBP17.87■□□□□ 0.45
TPM1-219ENST00000559397 BFSP1Q12934 665 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 MTF1Q14872 753 aa17.87■□□□□ 0.45
TPM1-219ENST00000559397 PSMD6Q15008 389 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms