RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 KIAA0319Q5VV43 1072 aa24.76■■□□□ 1.55
PABPN1-207ENST00000556821 SLC39A4Q6P5W5 647 aa24.76■■□□□ 1.55
PABPN1-207ENST00000556821 HASPINQ8TF76 798 aa24.76■■□□□ 1.55
PABPN1-207ENST00000556821 CASP10Q92851 521 aa24.76■■□□□ 1.55
PABPN1-207ENST00000556821 ZMAT2Q96NC0 199 aaKnown RBP24.76■■□□□ 1.55
PABPN1-207ENST00000556821 S1PR5Q9H228 398 aa24.76■■□□□ 1.55
PABPN1-207ENST00000556821 MRPL17Q9NRX2 175 aaKnown RBP24.76■■□□□ 1.55
PABPN1-207ENST00000556821 TOPORSQ9NS56 1045 aaPredicted RBP24.76■■□□□ 1.55
PABPN1-207ENST00000556821 CHST7Q9NS84 486 aa24.76■■□□□ 1.55
PABPN1-207ENST00000556821 SCN1AP35498 2009 aa24.76■■□□□ 1.55
PABPN1-207ENST00000556821 TSC2P49815 1807 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 SMIM28A0A1B0GU29 152 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 C2CD2LO14523 706 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 SCP2P22307 547 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 IGFBP6P24592 240 aaPredicted RBP24.75■■□□□ 1.55
PABPN1-207ENST00000556821 YARSP54577 528 aaKnown RBP24.75■■□□□ 1.55
PABPN1-207ENST00000556821 VCPP55072 806 aaKnown RBP24.75■■□□□ 1.55
PABPN1-207ENST00000556821 DSG1Q02413 1049 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 SOX4Q06945 474 aaPredicted RBP24.75■■□□□ 1.55
PABPN1-207ENST00000556821 ZC2HC1CQ53FD0 456 aaPredicted RBP24.75■■□□□ 1.55
PABPN1-207ENST00000556821 ATL3Q6DD88 541 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 SUSD6Q92537 303 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 BICD1Q96G01 975 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 ACAP3Q96P50 834 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 IRF2BPLQ9H1B7 796 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 ST6GALNAC4Q9H4F1 302 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 GOLGA2P5Q9HBQ8 144 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 ZDBF2Q9HCK1 2354 aa24.75■■□□□ 1.55
PABPN1-207ENST00000556821 ZFHX2Q9C0A1 2572 aaPredicted RBP24.75■■□□□ 1.55
PABPN1-207ENST00000556821 HNRNPDLO14979 420 aaKnown RBP24.74■■□□□ 1.55
PABPN1-207ENST00000556821 CLDN3O15551 220 aa24.74■■□□□ 1.55
PABPN1-207ENST00000556821 FAM189A1O60320 539 aa24.74■■□□□ 1.55
PABPN1-207ENST00000556821 PPP1R37O75864 691 aa24.74■■□□□ 1.55
PABPN1-207ENST00000556821 AVPR2P30518 371 aa24.74■■□□□ 1.55
PABPN1-207ENST00000556821 LIG4P49917 911 aa24.74■■□□□ 1.55
PABPN1-207ENST00000556821 SLC10A6Q3KNW5 377 aa24.74■■□□□ 1.55
PABPN1-207ENST00000556821 MAP4K3Q8IVH8 894 aa24.74■■□□□ 1.55
PABPN1-207ENST00000556821 KCNG4Q8TDN1 519 aa24.74■■□□□ 1.55
PABPN1-207ENST00000556821 CHAMP1Q96JM3 812 aa24.74■■□□□ 1.55
PABPN1-207ENST00000556821 CNTN3Q9P232 1028 aa24.74■■□□□ 1.55
PABPN1-207ENST00000556821 PCDHA7Q9UN72 937 aa24.74■■□□□ 1.55
PABPN1-207ENST00000556821 DOCK8Q8NF50 2099 aa24.73■■□□□ 1.55
PABPN1-207ENST00000556821 SF3B1O75533 1304 aaKnown RBP eCLIP24.73■■□□□ 1.559e-8■■■■■ 62.5
PABPN1-207ENST00000556821 KCNE1P15382 129 aa24.73■■□□□ 1.55
PABPN1-207ENST00000556821 SIGLEC14Q08ET2 396 aa24.73■■□□□ 1.55
PABPN1-207ENST00000556821 CD300LGQ6UXG3 332 aa24.73■■□□□ 1.55
PABPN1-207ENST00000556821 APOL5Q9BWW9 433 aa24.73■■□□□ 1.55
PABPN1-207ENST00000556821 STRA6Q9BX79 667 aa24.73■■□□□ 1.55
PABPN1-207ENST00000556821 RXFP1Q9HBX9 757 aa24.73■■□□□ 1.55
PABPN1-207ENST00000556821 CDH22Q9UJ99 828 aa24.73■■□□□ 1.55
PABPN1-207ENST00000556821 PTPRZ1P23471 2315 aaPredicted RBP24.73■■□□□ 1.55
PABPN1-207ENST00000556821 FRMD3A2A2Y4 597 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 TMEM189-UBE2V1I3L0A0 370 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 TEX28O15482 410 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 TADA2AO75478 443 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 HOXB8P17481 243 aaPredicted RBP24.72■■□□□ 1.55
PABPN1-207ENST00000556821 TNFSF9P41273 254 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 CLCN4P51793 760 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 CLCNKBP51801 687 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 USP41Q3LFD5 358 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 RTP2Q5QGT7 225 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 ZBTB41Q5SVQ8 909 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 ZNF720Q7Z2F6 126 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 C3orf58Q8NDZ4 430 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 STAMQ92783 540 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 EMILIN2Q9BXX0 1053 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 IKZF4Q9H2S9 585 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 SEL1LQ9UBV2 794 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 RCOR1Q9UKL0 485 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 SSX2IPQ9Y2D8 614 aa24.72■■□□□ 1.55
PABPN1-207ENST00000556821 TISP43B9A030 160 aa24.71■■□□□ 1.55
PABPN1-207ENST00000556821 CXCL8P10145 99 aa24.71■■□□□ 1.55
PABPN1-207ENST00000556821 GAP43P17677 238 aa24.71■■□□□ 1.55
PABPN1-207ENST00000556821 MATR3P43243 847 aaKnown RBP eCLIP24.71■■□□□ 1.55
PABPN1-207ENST00000556821 UPP1Q16831 310 aa24.71■■□□□ 1.55
PABPN1-207ENST00000556821 KIAA1841Q6NSI8 718 aa24.71■■□□□ 1.55
PABPN1-207ENST00000556821 PPFIBP1Q86W92 1011 aa24.71■■□□□ 1.55
PABPN1-207ENST00000556821 TMEM87AQ8NBN3 555 aa24.71■■□□□ 1.55
PABPN1-207ENST00000556821 FEZF2Q8TBJ5 459 aa24.71■■□□□ 1.55
PABPN1-207ENST00000556821 KBTBD4Q9NVX7 518 aa24.71■■□□□ 1.55
PABPN1-207ENST00000556821 CFAP45Q9UL16 551 aa24.71■■□□□ 1.55
PABPN1-207ENST00000556821 A0A0B4J269 797 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 ANKRD63C9JTQ0 380 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 KLRC2P26717 231 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 ABCD1P33897 745 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 ME1P48163 572 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 CASP5P51878 434 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 NUBP1P53384 320 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 KANK3Q6NY19 840 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 GPR65Q8IYL9 337 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 ATOH1Q92858 354 aaPredicted RBP24.7■■□□□ 1.54
PABPN1-207ENST00000556821 DHX58Q96C10 678 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 HVCN1Q96D96 273 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 FGFBP2Q9BYJ0 223 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 TNMDQ9H2S6 317 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 OLFML3Q9NRN5 406 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 SLC38A7Q9NVC3 462 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 DZANK1Q9NVP4 752 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 TBC1D7Q9P0N9 293 aa24.7■■□□□ 1.54
PABPN1-207ENST00000556821 TTC26A0AVF1 554 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms