RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ZNF564Q8TBZ8 553 aaPredicted RBP13.19□□□□□ -0.3
HDAC7-230ENST00000552960 RNF217Q8TC41 542 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 L3MBTL3Q96JM7 780 aaPredicted RBP13.19□□□□□ -0.3
HDAC7-230ENST00000552960 TRIM7Q9C029 511 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 AGPAT3Q9NRZ7 376 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 GGA3Q9NZ52 723 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 GTPBP10A4D1E9 387 aaKnown RBP13.19□□□□□ -0.3
HDAC7-230ENST00000552960 CYP26A1O43174 497 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 TBC1D12O60347 775 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 EYA4O95677 639 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 PDHA1P08559 390 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 CALRP27797 417 aaKnown RBP13.19□□□□□ -0.3
HDAC7-230ENST00000552960 RIPK1Q13546 671 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 DAB2IPQ5VWQ8 1189 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 VSTM1Q6UX27 236 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 OLIG1Q8TAK6 271 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 PCYOX1Q9UHG3 505 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 GOLGA8IPA6NC78 632 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 GOLGA8JA6NMD2 632 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 HIP1RO75146 1068 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 TARSP26639 723 aaKnown RBP13.18□□□□□ -0.3
HDAC7-230ENST00000552960 BNIP1Q12981 228 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 SPP2Q13103 211 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 TMED2Q15363 201 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 LENG9Q96B70 501 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 ADAM22Q9P0K1 906 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 COL2A1P02458 1487 aaPredicted RBP13.18□□□□□ -0.3
HDAC7-230ENST00000552960 ASNSP08243 561 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 HSPA6P17066 643 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 PCK1P35558 622 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 ZNF131P52739 623 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 CETN1Q12798 172 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 BFSP1Q12934 665 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 CRYGNQ8WXF5 182 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 ART4Q93070 314 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 CCDC127Q96BQ5 260 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 BORCS6Q96GS4 357 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 PCDHB18PQ96TA0 734 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 CHST7Q9NS84 486 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 NFIBO00712 420 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 ITGA8P53708 1063 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 SESN3P58005 492 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 MAP3K10Q02779 954 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 DNAJC3Q13217 504 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 EPC2Q52LR7 807 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 GBP7Q8N8V2 638 aaPredicted RBP13.18□□□□□ -0.3
HDAC7-230ENST00000552960 FBF1Q8TES7 1133 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 ERP27Q96DN0 273 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 HAO1Q9UJM8 370 aa13.18□□□□□ -0.3
HDAC7-230ENST00000552960 CTNNA2P26232 953 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 SLC47A2Q86VL8 602 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 LDHDQ86WU2 507 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 ZSWIM2Q8NEG5 633 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 PARD3BQ8TEW8 1205 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 WRNIP1Q96S55 665 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 RXFP1Q9HBX9 757 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 RAVER2Q9HCJ3 691 aaKnown RBP13.17□□□□□ -0.3
HDAC7-230ENST00000552960 SPATS2LQ9NUQ6 558 aaKnown RBP13.17□□□□□ -0.3
HDAC7-230ENST00000552960 ZMYM2Q9UBW7 1377 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 RASA4BC9J798 803 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 POC1B-GALNT4F8VUJ3 575 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 K7ENM7 598 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 RASA4O43374 803 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 SORBS3O60504 671 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 YBX3P16989 372 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDAC7-230ENST00000552960 GAP43P17677 238 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 RWDD2BP57060 319 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 THEMIS2Q5TEJ8 643 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 SAAL1Q96ER3 474 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 COL20A1Q9P218 1284 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 ANAPC5Q9UJX4 755 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 ZNF536O15090 1300 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 ARFGEF1Q9Y6D6 1849 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 ATP5DP30049 168 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 GBP1P32455 592 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 PEX5P50542 639 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 SETDB1Q15047 1291 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 CLUL1Q15846 466 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 BMT2Q1RMZ1 405 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 MAB21L3Q8N8X9 362 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 WDR18Q9BV38 432 aa13.17□□□□□ -0.3
HDAC7-230ENST00000552960 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDAC7-230ENST00000552960 AP1G2O75843 785 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 SLITRK3O94933 977 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 PPP3CAQ08209 521 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 TRMT10CQ7L0Y3 403 aaKnown RBP13.16□□□□□ -0.3
HDAC7-230ENST00000552960 GSTA5Q7RTV2 222 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 NOP9Q86U38 636 aaKnown RBP13.16□□□□□ -0.3
HDAC7-230ENST00000552960 ECHDC2Q86YB7 292 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 SPDYE1Q8NFV5 336 aaPredicted RBP13.16□□□□□ -0.3
HDAC7-230ENST00000552960 CKAP2Q8WWK9 683 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 ROPN1BQ9BZX4 212 aaPredicted RBP13.16□□□□□ -0.3
HDAC7-230ENST00000552960 GLT8D2Q9H1C3 349 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 CCDC134Q9H6E4 229 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 ROPN1Q9HAT0 212 aaPredicted RBP13.16□□□□□ -0.3
HDAC7-230ENST00000552960 SLCO1B3Q9NPD5 702 aa13.16□□□□□ -0.3
HDAC7-230ENST00000552960 BATF3Q9NR55 127 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms