RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 CARD14Q9BXL6 1004 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 ACPTQ9BZG2 426 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 SHCBP1LQ9BZQ2 653 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 YIPF3Q9GZM5 350 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 DPH5Q9H2P9 285 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 TPK1Q9H3S4 243 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 C12orf4Q9NQ89 552 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 PIH1D3Q9NQM4 214 aaKnown RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 EURLQ9NYK6 297 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 TRIM10Q9UDY6 481 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 C19orf53Q9UNZ5 99 aaPredicted RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 MAPRE3Q9UPY8 281 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 STK38LQ9Y2H1 464 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 V9GY48 417 aaPredicted RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 ABCA5Q8WWZ7 1642 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 FGD5Q6ZNL6 1462 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 COL17A1Q9UMD9 1497 aaPredicted RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 PTPDC1A2A3K4 754 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 CCDC78A2IDD5 438 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 KRT87PA6NCN2 255 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 KIF28PB7ZC32 967 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 M0R3H8 397 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 NDUFS8O00217 210 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 IGF2BP3O00425 579 aaKnown RBP eCLIP6.95□□□□□ -1.3
SDC2-208ENST00000523877 RAD51BO15315 384 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 SRGAP2O75044 1071 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 SUPT3HO75486 399 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 ENDOD1O94919 500 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 SEC31AO94979 1220 aaKnown RBP6.95□□□□□ -1.3
SDC2-208ENST00000523877 ASMTLO95671 621 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 KRT6AP02538 564 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 KRT6BP04259 564 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 HMGN1P05114 100 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 KRT7P08729 469 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 CLTAP09496 248 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 SYN1P17600 705 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 PTPN2P17706 415 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 LMAN1P49257 510 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 AARSP49588 968 aaKnown RBP eCLIP6.95□□□□□ -1.3
SDC2-208ENST00000523877 UBE2IP63279 158 aaKnown RBP6.95□□□□□ -1.3
SDC2-208ENST00000523877 MRPS5P82675 430 aaKnown RBP6.95□□□□□ -1.3
SDC2-208ENST00000523877 LGALS3BPQ08380 585 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 ITKQ08881 620 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 GALNT1Q10472 559 aaPredicted RBP6.95□□□□□ -1.3
SDC2-208ENST00000523877 GIT2Q14161 759 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 SPARCL1Q14515 664 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 TLR1Q15399 786 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 ARL13BQ3SXY8 428 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 SPDYAQ5MJ70 313 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 TMEM132EQ6IEE7 984 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 SLC30A6Q6NXT4 461 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 CYB5D1Q6P9G0 228 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 SARM1Q6SZW1 724 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 XKR5Q6UX68 686 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 C15orf52Q6ZUT6 534 aaKnown RBP6.95□□□□□ -1.3
SDC2-208ENST00000523877 TTC5Q8N0Z6 440 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 ARL14Q8N4G2 192 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 FBXO15Q8NCQ5 510 aaPredicted RBP6.95□□□□□ -1.3
SDC2-208ENST00000523877 NSUN7Q8NE18 718 aaKnown RBP6.95□□□□□ -1.3
SDC2-208ENST00000523877 STARD8Q92502 1023 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 WASF1Q92558 559 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 BAP1Q92560 729 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 ANKS1AQ92625 1134 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 ATP2A3Q93084 1043 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 MTMR8Q96EF0 704 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 NT5C1BQ96P26 610 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 TMEM237Q96Q45 408 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 CDRT15Q96T59 188 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 EYA1Q99502 592 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 EYA3Q99504 573 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 YIPF4Q9BSR8 244 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 ACAT2Q9BWD1 397 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 EMILIN2Q9BXX0 1053 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 UBXN6Q9BZV1 441 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 NTN4Q9HB63 628 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 MRM3Q9HC36 420 aaKnown RBP6.95□□□□□ -1.3
SDC2-208ENST00000523877 PREBQ9HCU5 417 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 TUFT1Q9NNX1 390 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 SLC39A2Q9NP94 309 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 DMAP1Q9NPF5 467 aaPredicted RBP6.95□□□□□ -1.3
SDC2-208ENST00000523877 RPRD1BQ9NQG5 326 aaKnown RBP6.95□□□□□ -1.3
SDC2-208ENST00000523877 TRMT13Q9NUP7 481 aaKnown RBP6.95□□□□□ -1.3
SDC2-208ENST00000523877 PAQR5Q9NXK6 330 aaPredicted RBP6.95□□□□□ -1.3
SDC2-208ENST00000523877 SENP1Q9P0U3 644 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 GMIPQ9P107 970 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 MYO1AQ9UBC5 1043 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 FETUBQ9UGM5 382 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 CD300AQ9UGN4 299 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 SLC7A8Q9UHI5 535 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 FAM153AQ9UHL3 310 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 RCAN3Q9UKA8 241 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 GJD2Q9UKL4 321 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 GPR52Q9Y2T5 361 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 STON1Q9Y6Q2 735 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 TEX14Q8IWB6 1497 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 TSPOAP1O95153 1857 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 ADAMTS12P58397 1594 aa6.95□□□□□ -1.3
SDC2-208ENST00000523877 NPATQ14207 1427 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 MIA2Q96PC5 1412 aa6.94□□□□□ -1.3
SDC2-208ENST00000523877 A0A1B0GWJ7 208 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms