RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 NKX3-2P78367 333 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 COL19A1Q14993 1142 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 CCL14Q16627 93 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 PTPN21Q16825 1174 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 GJC2Q5T442 439 aaPredicted RBP8.34□□□□□ -1.07
CDC42-205ENST00000498236 INTS8Q75QN2 995 aaKnown RBP8.34□□□□□ -1.07
CDC42-205ENST00000498236 TMC7Q7Z402 723 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 LINC01465Q8N7H1 131 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 XXYLT1Q8NBI6 393 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 OR6J1Q8NGC5 347 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 DEPTORQ8TB45 409 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 PRPF31Q8WWY3 499 aaKnown RBP8.34□□□□□ -1.07
CDC42-205ENST00000498236 PSPC1Q8WXF1 523 aaKnown RBP8.34□□□□□ -1.07
CDC42-205ENST00000498236 BAG1Q99933 345 aaPredicted RBP8.34□□□□□ -1.07
CDC42-205ENST00000498236 RNPEPQ9H4A4 650 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 NEUROD4Q9HD90 331 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 PLCB1Q9NQ66 1216 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 ABHD10Q9NUJ1 306 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 HSPBP1Q9NZL4 362 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 LUC7L2Q9Y383 392 aaKnown RBP8.34□□□□□ -1.07
CDC42-205ENST00000498236 DAAM1Q9Y4D1 1078 aa8.34□□□□□ -1.07
CDC42-205ENST00000498236 SIP14410 1827 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 RRN3P2A6NIE6 340 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 K7ERI5 159 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 HNRNPDLO14979 420 aaKnown RBP8.33□□□□□ -1.08
CDC42-205ENST00000498236 P4HA2O15460 535 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 MGAMO43451 1857 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 EXOC3O60645 756 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 AOC2O75106 756 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 MICAL2O94851 1124 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 F2P00734 622 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 INSRRP14616 1297 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 PCSK2P16519 638 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 TRIM21P19474 475 aaKnown RBP8.33□□□□□ -1.08
CDC42-205ENST00000498236 HNRNPH3P31942 346 aaKnown RBP8.33□□□□□ -1.08
CDC42-205ENST00000498236 CYP2C19P33261 490 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 KRT9P35527 623 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 PSMC4P43686 418 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 CPT1AP50416 773 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 CYP2J2P51589 502 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 ADKP55263 362 aaKnown RBP8.33□□□□□ -1.08
CDC42-205ENST00000498236 ZBED6P86452 979 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 CDK17Q00537 523 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 SP3Q02447 781 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 LAMTOR4Q0VGL1 99 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 KCNMA1Q12791 1236 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 BFSP1Q12934 665 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 STRN3Q13033 797 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 CAPSQ13938 189 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 TFDP1Q14186 410 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 NOLC1Q14978 699 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDC42-205ENST00000498236 MEA1Q16626 185 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 ARSJQ5FYB0 599 aaPredicted RBP8.33□□□□□ -1.08
CDC42-205ENST00000498236 SLFN12LQ6IEE8 588 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 SLC39A4Q6P5W5 647 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 ZPBP2Q6X784 338 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 TLK2Q86UE8 772 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 TMTC1Q8IUR5 882 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 DOCK3Q8IZD9 2030 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 ZNF397Q8NF99 534 aaPredicted RBP8.33□□□□□ -1.08
CDC42-205ENST00000498236 OR8K1Q8NGG5 319 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 EDEM1Q92611 657 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 SYN2Q92777 582 aaPredicted RBP8.33□□□□□ -1.08
CDC42-205ENST00000498236 DMRTB1Q96MA1 342 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 CBWD1Q9BRT8 395 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 KIFC3Q9BVG8 833 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 CCDC113Q9H0I3 377 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 NUCKS1Q9H1E3 243 aaKnown RBP8.33□□□□□ -1.08
CDC42-205ENST00000498236 C2orf40Q9H1Z8 148 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 IKZF4Q9H2S9 585 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 KIAA1586Q9HCI6 787 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 RRAGDQ9NQL2 400 aaPredicted RBP8.33□□□□□ -1.08
CDC42-205ENST00000498236 FBXL5Q9UKA1 691 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 POLIQ9UNA4 740 aa8.33□□□□□ -1.08
CDC42-205ENST00000498236 CASP8AP2Q9UKL3 1982 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 LRRIQ4A6NIV6 560 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 ANKRD63C9JTQ0 380 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 RNF225M0QZC1 329 aaPredicted RBP8.32□□□□□ -1.08
CDC42-205ENST00000498236 HAS3O00219 553 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 DYNC1LI2O43237 492 aaPredicted RBP8.32□□□□□ -1.08
CDC42-205ENST00000498236 CCP110O43303 1012 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 KPNA6O60684 536 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 N4BP1O75113 896 aaKnown RBP8.32□□□□□ -1.08
CDC42-205ENST00000498236 DUSP11O75319 330 aaKnown RBP8.32□□□□□ -1.08
CDC42-205ENST00000498236 NOL4O94818 638 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 ZNF286BP0CG31 522 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 CYBAP13498 195 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 KRT13P13646 458 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 AKR1A1P14550 325 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 TMOD1P28289 359 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 FLT3LGP49771 235 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 CDC42EP1Q00587 391 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 DRP2Q13474 957 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 KIF22Q14807 665 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.32□□□□□ -1.083e-6■□□□□ 10.8
CDC42-205ENST00000498236 PRAMEF19Q5SWL8 479 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 MFSD14CQ5VZR4 134 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 DPY19L2P1Q6NXN4 242 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 EFCAB12Q6NXP0 572 aa8.32□□□□□ -1.08
CDC42-205ENST00000498236 CYP26C1Q6V0L0 522 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms