RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SPRYD3Q8NCJ5 442 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 LNX1Q8TBB1 728 aaPredicted RBP15.33■□□□□ 0.04
VTI1A-206ENST00000489142 PARVGQ9HBI0 331 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.33■□□□□ 0.04
VTI1A-206ENST00000489142 FNIP2Q9P278 1114 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 LIMD1Q9UGP4 676 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 HCN4Q9Y3Q4 1203 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 SRPRBQ9Y5M8 271 aaKnown RBP15.33■□□□□ 0.04
VTI1A-206ENST00000489142 TMEM221A6NGB7 291 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 M0R296 226 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 PODXLO00592 558 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 CLDN3O15551 220 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 TKTP29401 623 aaKnown RBP15.32■□□□□ 0.04
VTI1A-206ENST00000489142 TNFSF9P41273 254 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 LIG4P49917 911 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 ZNF131P52739 623 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 SLC10A6Q3KNW5 377 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 FOXD4L6Q3SYB3 417 aaPredicted RBP15.32■□□□□ 0.04
VTI1A-206ENST00000489142 XKR4Q5GH76 650 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 FOXD4L3Q6VB84 417 aaPredicted RBP15.32■□□□□ 0.04
VTI1A-206ENST00000489142 TRIM67Q6ZTA4 783 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 CCDC149Q6ZUS6 474 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 HSCBQ8IWL3 235 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 KREMEN2Q8NCW0 462 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 CLSTN3Q9BQT9 956 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 PANK2Q9BZ23 570 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 IKZF4Q9H2S9 585 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 CNTN3Q9P232 1028 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 TUBGCP4Q9UGJ1 667 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 TBX20Q9UMR3 447 aa15.32■□□□□ 0.04
VTI1A-206ENST00000489142 ANK1P16157 1881 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 A0A087X0B3 334 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 TISP43B9A030 160 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 HNRNPDLO14979 420 aaKnown RBP15.31■□□□□ 0.04
VTI1A-206ENST00000489142 TRAK2O60296 914 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 DDIT3P35638 169 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 CREMQ03060 361 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 MCL1Q07820 350 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 ELAVL2Q12926 359 aaKnown RBP15.31■□□□□ 0.04
VTI1A-206ENST00000489142 ZC2HC1CQ53FD0 456 aaPredicted RBP15.31■□□□□ 0.04
VTI1A-206ENST00000489142 RRAGBQ5VZM2 374 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 DCLRE1AQ6PJP8 1040 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 ZPBP2Q6X784 338 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.31■□□□□ 0.04
VTI1A-206ENST00000489142 SFR1Q86XK3 245 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 PIK3R5Q8WYR1 880 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 SMG7Q92540 1137 aaKnown RBP15.31■□□□□ 0.04
VTI1A-206ENST00000489142 SNX21Q969T3 373 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 ZNF707Q96C28 371 aaPredicted RBP15.31■□□□□ 0.04
VTI1A-206ENST00000489142 UROC1Q96N76 676 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 FIZ1Q96SL8 496 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 TFIP11Q9UBB9 837 aaKnown RBP15.31■□□□□ 0.04
VTI1A-206ENST00000489142 CCDC39Q9UFE4 941 aa15.31■□□□□ 0.04
VTI1A-206ENST00000489142 H0YCG3 227 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 TMEM189-UBE2V1I3L0A0 370 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 N4BP1O75113 896 aaKnown RBP15.3■□□□□ 0.04
VTI1A-206ENST00000489142 KCNE1P15382 129 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 FGFR3P22607 806 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 SLC39A14Q15043 492 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 STK38Q15208 465 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 SLC39A4Q6P5W5 647 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 LILRA6Q6PI73 481 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 RSPO2Q6UXX9 243 aaPredicted RBP15.3■□□□□ 0.04
VTI1A-206ENST00000489142 C15orf39Q6ZRI6 1047 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 KMT2EQ8IZD2 1858 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 KRI1Q8N9T8 703 aaKnown RBP15.3■□□□□ 0.04
VTI1A-206ENST00000489142 DOCK8Q8NF50 2099 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 CMASQ8NFW8 434 aaPredicted RBP15.3■□□□□ 0.04
VTI1A-206ENST00000489142 DDX27Q96GQ7 796 aaKnown RBP15.3■□□□□ 0.04
VTI1A-206ENST00000489142 ZSCAN16Q9H4T2 348 aaPredicted RBP15.3■□□□□ 0.04
VTI1A-206ENST00000489142 PIDD1Q9HB75 910 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 SLC38A7Q9NVC3 462 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 TBC1D7Q9P0N9 293 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 KCNG1Q9UIX4 513 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 FBXW11Q9UKB1 542 aa15.3■□□□□ 0.04
VTI1A-206ENST00000489142 WDFY4Q6ZS81 3184 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 CLUHO75153 1309 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 MYMKA6NI61 221 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 ANKRD63C9JTQ0 380 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 HSP90AA1P07900 732 aaKnown RBP15.29■□□□□ 0.04
VTI1A-206ENST00000489142 OR1D2P34982 312 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 TXLNAP40222 546 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 GUCY2FP51841 1108 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 SIGLEC14Q08ET2 396 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 ELMSAN1Q6PJG2 1045 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 GPR65Q8IYL9 337 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 ZDHHC14Q8IZN3 488 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 PDILTQ8N807 584 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 ST13P5Q8NFI4 369 aaPredicted RBP15.29■□□□□ 0.04
VTI1A-206ENST00000489142 DDX12PQ92771 950 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 PBXIP1Q96AQ6 731 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 PLEKHA4Q9H4M7 779 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 STK17AQ9UEE5 414 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 CDY1Q9Y6F8 540 aa15.29■□□□□ 0.04
VTI1A-206ENST00000489142 ZNF318Q5VUA4 2279 aa15.28■□□□□ 0.04
VTI1A-206ENST00000489142 LACTBL1A8MY62 500 aa15.28■□□□□ 0.04
VTI1A-206ENST00000489142 CCL16O15467 120 aa15.28■□□□□ 0.04
VTI1A-206ENST00000489142 FAM189A1O60320 539 aa15.28■□□□□ 0.04
VTI1A-206ENST00000489142 PDGFBP01127 241 aaPredicted RBP15.28■□□□□ 0.04
VTI1A-206ENST00000489142 C8AP07357 584 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms