RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 KRBA1A5PL33 1030 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 ANHXE9PGG2 379 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 ACKR2O00590 384 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 PI15O43692 258 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 HNRNPA1P09651 372 aaKnown RBP eCLIP9.41□□□□□ -0.9
PRKCB-208ENST00000487674 LAMP2P13473 410 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 RFX1P22670 979 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 HOXA9P31269 272 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 EFNA5P52803 228 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 HTR4Q13639 388 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 NAB2Q15742 525 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 PSMD5Q16401 504 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 TTC38Q5R3I4 469 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 FAM171A1Q5VUB5 890 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.41□□□□□ -0.9
PRKCB-208ENST00000487674 NYAP1Q6ZVC0 841 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 APBB1IPQ7Z5R6 666 aaPredicted RBP9.41□□□□□ -0.9
PRKCB-208ENST00000487674 FRMD5Q7Z6J6 570 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 SLC44A3Q8N4M1 653 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 DTWD2Q8NBA8 298 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 PPP4R2Q9NY27 417 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 SNTG2Q9NY99 539 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 LIMCH1Q9UPQ0 1083 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 MYO15AQ9UKN7 3530 aa9.41□□□□□ -0.9
PRKCB-208ENST00000487674 SPTBN4Q9H254 2564 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 TMEM189-UBE2V1I3L0A0 370 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 EDN1P05305 212 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 C8AP07357 584 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 POU2F2P09086 479 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 LIG1P18858 919 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 FSHRP23945 695 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 TRAPPC10P48553 1259 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 RBM25P49756 843 aaKnown RBP9.4□□□□□ -0.9
PRKCB-208ENST00000487674 HMGN5P82970 282 aaKnown RBP9.4□□□□□ -0.9
PRKCB-208ENST00000487674 KCNC4Q03721 635 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 GNL2Q13823 731 aaKnown RBP9.4□□□□□ -0.9
PRKCB-208ENST00000487674 ANGPT1Q15389 498 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 ZNF174Q15697 407 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 PPM1LQ5SGD2 360 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 ATF7IP2Q5U623 682 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 EEF1DP3Q658K8 133 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 CEP57Q86XR8 500 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 NOSTRINQ8IVI9 506 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 CCDC83Q8IWF9 413 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 LNX1Q8TBB1 728 aaPredicted RBP9.4□□□□□ -0.9
PRKCB-208ENST00000487674 GPR152Q8TDT2 470 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 KIFAP3Q92845 792 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 IFT74Q96LB3 600 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 CLSTN3Q9BQT9 956 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 KIFC3Q9BVG8 833 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 TBC1D17Q9HA65 648 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 ARHGEF3Q9NR81 526 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 SLC2A4RGQ9NR83 387 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 CDH7Q9ULB5 785 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 CA14Q9ULX7 337 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 NOL7Q9UMY1 257 aaKnown RBP9.4□□□□□ -0.9
PRKCB-208ENST00000487674 GDAQ9Y2T3 454 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 NUMBLQ9Y6R0 609 aa9.4□□□□□ -0.9
PRKCB-208ENST00000487674 CFAP54Q96N23 3096 aa9.4□□□□□ -0.91
PRKCB-208ENST00000487674 DOCK6Q96HP0 2047 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 TRIP11Q15643 1979 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 PHLPP2Q6ZVD8 1323 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 XYLBO75191 536 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 FGFR3P22607 806 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 CCT6AP40227 531 aaKnown RBP9.39□□□□□ -0.91
PRKCB-208ENST00000487674 GLRA4Q5JXX5 417 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 PHLDB3Q6NSJ2 640 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 MTSS1LQ765P7 747 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 GRASPQ7Z6J2 395 aaPredicted RBP9.39□□□□□ -0.91
PRKCB-208ENST00000487674 FBXO18Q8NFZ0 1043 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 SLC7A14Q8TBB6 771 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 KCNV2Q8TDN2 545 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 SNX27Q96L92 541 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 UROC1Q96N76 676 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 PPP1R10Q96QC0 940 aaKnown RBP9.39□□□□□ -0.91
PRKCB-208ENST00000487674 CXCL16Q9H2A7 254 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 BHMT2Q9H2M3 363 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 MTRRQ9UBK8 725 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 LRWD1Q9UFC0 647 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 USP20Q9Y2K6 914 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 MIA3Q5JRA6 1907 aa9.39□□□□□ -0.91
PRKCB-208ENST00000487674 CITO14578 2027 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 CCL16O15467 120 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 ADAM12O43184 909 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 TRAPPC3O43617 180 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 B3GAT3O94766 335 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 RAB33AQ14088 237 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 ECM1Q16610 540 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 ZNF568Q3ZCX4 644 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 NT5DC1Q5TFE4 455 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 ERICH6BQ5W0A0 696 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 DCLRE1AQ6PJP8 1040 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 ANKS3Q6ZW76 656 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 RTL10Q7L3V2 364 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 C4orf32Q8N8J7 132 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 IGSF22Q8N9C0 903 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 FAM184AQ8NB25 1140 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 SNX29Q8TEQ0 813 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 DDX12PQ92771 950 aa9.38□□□□□ -0.91
PRKCB-208ENST00000487674 FGF13Q92913 245 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms