RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 MYLK2Q9H1R3 596 aa13.85□□□□□ -0.19
PDZRN3-205ENST00000466780 NKIRAS1Q9NYS0 192 aa13.85□□□□□ -0.19
PDZRN3-205ENST00000466780 PMM2O15305 246 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 CDH16O75309 829 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 ATP2A2P16615 1042 aaKnown RBP13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 RRM1P23921 792 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 MFAP3P55082 362 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 ATP11AP98196 1134 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 STRN3Q13033 797 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 C9orf72Q96LT7 481 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 PITPNM3Q9BZ71 974 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 DBNDD1Q9H9R9 158 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 NKX1-2Q9UD57 310 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 ANAPC7Q9UJX3 599 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 DDX39AO00148 427 aaKnown RBP13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 SMNDC1O75940 238 aaKnown RBP eCLIP13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 WFS1O76024 890 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 GH2P01242 217 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 ABL2P42684 1182 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 CAV1Q03135 178 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 SLC27A3Q5K4L6 730 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 CBWD2Q8IUF1 395 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 KCNV2Q8TDN2 545 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 MAML1Q92585 1016 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 FAM118BQ9BPY3 351 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 PLVAPQ9BX97 442 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 TEKT3Q9BXF9 490 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 LARSQ9P2J5 1176 aaKnown RBP13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 KLRG2A4D1S0 409 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 TULP1O00294 542 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 GAS8O95995 478 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 POLR2MP0CAP2 368 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 MAPK4P31152 587 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 CCNHP51946 323 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 TBC1D10BQ4KMP7 808 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 DAB2IPQ5VWQ8 1189 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 SPOCK2Q92563 424 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 GRAMD1AQ96CP6 724 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 SPDL1Q96EA4 605 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 DDX27Q96GQ7 796 aaKnown RBP13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 IDI2Q9BXS1 227 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 ACTL7BQ9Y614 415 aa13.84□□□□□ -0.19
PDZRN3-205ENST00000466780 MROH7Q68CQ1 1323 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 IPO5O00410 1097 aaKnown RBP13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 VIL1P09327 827 aaKnown RBP13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 MAN1A1P33908 653 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 CLEC16AQ2KHT3 1053 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 RBM26Q5T8P6 1007 aaKnown RBP13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 LLGL2Q6P1M3 1020 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 CCDC174Q6PII3 467 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 PPP1R21Q6ZMI0 780 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 PHLDB2Q86SQ0 1253 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 ATL2Q8NHH9 583 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 GRK7Q8WTQ7 553 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 SH2D3AQ9BRG2 576 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 HEMGNQ9BXL5 484 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 CHKBQ9Y259 395 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 UBR3Q6ZT12 1888 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 RASA4BC9J798 803 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 MAPK13O15264 365 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 RASA4O43374 803 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 MAPTP10636 758 aaKnown RBP13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 GRIK3Q13003 919 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 KLF1Q13351 362 aaPredicted RBP13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 TMED2Q15363 201 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 CDCA2Q69YH5 1023 aaPredicted RBP13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 HAUS6Q7Z4H7 955 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 FBF1Q8TES7 1133 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 CCDC127Q96BQ5 260 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 ERP27Q96DN0 273 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 TMEM237Q96Q45 408 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 MOV10L1Q9BXT6 1211 aaKnown RBP13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 LRMDAQ9H2I8 198 aa13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 TRPC5Q9UL62 973 aaPredicted RBP13.83□□□□□ -0.2
PDZRN3-205ENST00000466780 FAM47DPA6NHR8 397 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 SPAG7O75391 227 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 ASMTLO95671 621 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 PLS3P13797 630 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 GCAP28676 217 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 ECE1P42892 770 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 IL9RQ01113 521 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 DNAJC3Q13217 504 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 ALCAMQ13740 583 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 BLMHQ13867 455 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 STAT4Q14765 748 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 NAIF1Q69YI7 327 aaPredicted RBP13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 RELL1Q8IUW5 271 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 SLC17A8Q8NDX2 589 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 ZNF622Q969S3 477 aaKnown RBP eCLIP13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 PAIP2Q9BPZ3 127 aaKnown RBP13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 TOPORSQ9NS56 1045 aaPredicted RBP13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 TXLNGQ9NUQ3 528 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 PKD2L1Q9P0L9 805 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 MAGEB2O15479 319 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 POTEJP0CG39 1038 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 RALAP11233 206 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 GNAZP19086 355 aa13.82□□□□□ -0.2
PDZRN3-205ENST00000466780 ADSSP30520 456 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms