RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 DERAQ9Y315 318 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 COL6A3P12111 3177 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 LACTBL1A8MY62 500 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 TGFB1I1O43294 461 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 EXTL3O43909 919 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 TADA2AO75478 443 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 SMC2O95347 1197 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 SOD2P04179 222 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 CYP3A5P20815 502 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 COL19A1Q14993 1142 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 SKIV2LQ15477 1246 aaKnown RBP12.85□□□□□ -0.35
HSPG2-206ENST00000439717 ZBTB6Q15916 424 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 UPP1Q16831 310 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 PLPP4Q5VZY2 271 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 CRELD2Q6UXH1 353 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-206ENST00000439717 C12orf56Q8IXR9 622 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 RNF168Q8IYW5 571 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-206ENST00000439717 MRPL43Q8N983 215 aaKnown RBP12.85□□□□□ -0.35
HSPG2-206ENST00000439717 KIAA0895Q8NCT3 520 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 PAAF1Q9BRP4 392 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 CBWD1Q9BRT8 395 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 FAM213AQ9BRX8 229 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 HERC2P3Q9BVR0 1158 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 VN1R3Q9BXE9 311 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 GTPBP4Q9BZE4 634 aaKnown RBP12.85□□□□□ -0.35
HSPG2-206ENST00000439717 KIAA1586Q9HCI6 787 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 AGPAT3Q9NRZ7 376 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 RMND1Q9NWS8 449 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 UBQLN1Q9UMX0 589 aaKnown RBP12.85□□□□□ -0.35
HSPG2-206ENST00000439717 IRAK3Q9Y616 596 aa12.85□□□□□ -0.35
HSPG2-206ENST00000439717 SF3B1O75533 1304 aaKnown RBP eCLIP12.85□□□□□ -0.351e-7■■■■■ 172.3
HSPG2-206ENST00000439717 PRRC2BQ5JSZ5 2229 aaKnown RBP12.84□□□□□ -0.35
HSPG2-206ENST00000439717 C2orf71A6NGG8 1288 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
HSPG2-206ENST00000439717 CSPG5O95196 566 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 KIF4AO95239 1232 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 IL18RAPO95256 599 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 CXCL14O95715 111 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 CLCNKBP51801 687 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 SOX4Q06945 474 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-206ENST00000439717 HYAL1Q12794 435 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 ELAVL2Q12926 359 aaKnown RBP12.84□□□□□ -0.35
HSPG2-206ENST00000439717 PNOCQ13519 176 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 FUT10Q6P4F1 479 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 NT5DC4Q86YG4 428 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 NELFCDQ8IXH7 590 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 GPR65Q8IYL9 337 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 GPD1LQ8N335 351 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 SPATA20Q8TB22 786 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 TMEM174Q8WUU8 243 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 C18orf25Q96B23 403 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-206ENST00000439717 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 GSDMAQ96QA5 445 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 PCIF1Q9H4Z3 704 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 TLE6Q9H808 572 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 CHST7Q9NS84 486 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 HSPBP1Q9NZL4 362 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 C2CD2Q9Y426 696 aa12.84□□□□□ -0.35
HSPG2-206ENST00000439717 EYSQ5T1H1 3165 aa12.83□□□□□ -0.35
HSPG2-206ENST00000439717 CITO14578 2027 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-206ENST00000439717 F8W810 466 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 PODXLO00592 558 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 PDXKO00764 312 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 TRAPPC3O43617 180 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 B3GAT3O94766 335 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 URODP06132 367 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 LRPAP1P30533 357 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 TMEM132DQ14C87 1099 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 PTPN14Q15678 1187 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 DUSP6Q16828 381 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 CTC1Q2NKJ3 1217 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 USP41Q3LFD5 358 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 ADGRD2Q7Z7M1 963 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 BRSK2Q8IWQ3 736 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 GUF1Q8N442 669 aaKnown RBP12.83□□□□□ -0.36
HSPG2-206ENST00000439717 EFHBQ8N7U6 833 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 BEST2Q8NFU1 509 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 RABGGTAQ92696 567 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 HLA-CQ95604 372 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 SMARCE1Q969G3 411 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 PABPC5Q96DU9 382 aaKnown RBP12.83□□□□□ -0.36
HSPG2-206ENST00000439717 FAM212AQ96EL1 285 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 SAAL1Q96ER3 474 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 FBXL18Q96ME1 805 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 GBP4Q96PP9 640 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 GPR62Q9BZJ7 368 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 GOLGA2P5Q9HBQ8 144 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 MRPL17Q9NRX2 175 aaKnown RBP12.83□□□□□ -0.36
HSPG2-206ENST00000439717 RBAKQ9NYW8 714 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-206ENST00000439717 THEGQ9P2T0 379 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 CACNG4Q9UBN1 327 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 TUBGCP4Q9UGJ1 667 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 PCDHGC5Q9Y5F6 944 aa12.83□□□□□ -0.36
HSPG2-206ENST00000439717 ATG2AQ2TAZ0 1938 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-206ENST00000439717 GOLGA8IPA6NC78 632 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 ZNF233A6NK53 670 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 GOLGA8JA6NMD2 632 aa12.82□□□□□ -0.36
HSPG2-206ENST00000439717 HIDE1A8MVS5 230 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms