RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 NIPA1Q7RTP0 329 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 ACOT1Q86TX2 421 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 KIAA0895Q8NCT3 520 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 ADAM2Q99965 735 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 RBPJLQ9UBG7 517 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 HDAC6Q9UBN7 1215 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 DAAM1Q9Y4D1 1078 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 PI4K2BG5E9Z4 385 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 PIK3CDO00329 1044 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 KRT3P12035 628 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 SEMA3FQ13275 785 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 KRT222Q8N1A0 295 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 STK33Q9BYT3 514 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 A0A1W2PQC6 194 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 SLC7A5Q01650 507 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 KRT17Q04695 432 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 PPP1R2P3Q6NXS1 205 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 PPP2R3CQ969Q6 453 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 SYNGAP1Q96PV0 1343 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 LRRC31Q6UY01 552 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 ASNSD1Q9NWL6 643 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 LTBP4Q8N2S1 1624 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 TBKBP1A7MCY6 615 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 PDGFRAP16234 1089 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 ACO1P21399 889 aaKnown RBP17.79■□□□□ 0.44
LMNB2-201ENST00000325327 PCSK1P29120 753 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 SMAD1Q15797 465 aaKnown RBP17.79■□□□□ 0.44
LMNB2-201ENST00000325327 GPAT2Q6NUI2 795 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 ARHGEF18Q6ZSZ5 1173 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 EPB41L5Q9HCM4 733 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 KCNMB3Q9NPA1 279 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 CAPN11Q9UMQ6 739 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 PASKQ96RG2 1323 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 MYL6P60660 151 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 PRKCZQ05513 592 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 UGCGQ16739 394 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 SV2CQ496J9 727 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 KIAA0319LQ8IZA0 1049 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 KCTD17Q8N5Z5 321 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 MKNK1Q9BUB5 465 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 RNPEPQ9H4A4 650 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 HEXIM1O94992 359 aaKnown RBP17.79■□□□□ 0.44
LMNB2-201ENST00000325327 ADCY1Q08828 1119 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 ACCSLQ4AC99 568 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 SV2AQ7L0J3 742 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 GABPB2Q8TAK5 448 aaPredicted RBP17.79■□□□□ 0.44
LMNB2-201ENST00000325327 MGARPQ8TDB4 240 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 PPM1EQ8WY54 764 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 GAD1Q99259 594 aa17.79■□□□□ 0.44
LMNB2-201ENST00000325327 IVLP07476 585 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 DBR1Q9UK59 544 aaKnown RBP17.78■□□□□ 0.44
LMNB2-201ENST00000325327 SLC26A4O43511 780 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 SEPT6Q14141 434 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 TTI2Q6NXR4 508 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 ZNF214Q9UL59 606 aaPredicted RBP17.78■□□□□ 0.44
LMNB2-201ENST00000325327 TFR2Q9UP52 801 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 LTBP3Q9NS15 1303 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 POC1B-GALNT4F8VUJ3 575 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 CTNNA1P35221 906 aaKnown RBP17.78■□□□□ 0.44
LMNB2-201ENST00000325327 BTG3Q14201 252 aaPredicted RBP17.78■□□□□ 0.44
LMNB2-201ENST00000325327 DCAF4L1Q3SXM0 396 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 TRAPPC11Q7Z392 1133 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 CPLX4Q7Z7G2 160 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 TTC39CQ8N584 583 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 TTC7AQ9ULT0 858 aaPredicted RBP17.78■□□□□ 0.44
LMNB2-201ENST00000325327 ADGRG1Q9Y653 693 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 COL1A1P02452 1464 aaPredicted RBP17.78■□□□□ 0.44
LMNB2-201ENST00000325327 RAP1GAPP47736 663 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 HVCN1Q96D96 273 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 GOLPH3Q9H4A6 298 aa17.78■□□□□ 0.44
LMNB2-201ENST00000325327 FOXN3O00409 490 aaPredicted RBP17.77■□□□□ 0.44
LMNB2-201ENST00000325327 SMIM10L2AP0DMW4 78 aa17.77■□□□□ 0.44
LMNB2-201ENST00000325327 SMIM10L2BP0DMW5 78 aa17.77■□□□□ 0.44
LMNB2-201ENST00000325327 CDH6P55285 790 aa17.77■□□□□ 0.44
LMNB2-201ENST00000325327 RNF219Q5W0B1 726 aaPredicted RBP17.77■□□□□ 0.44
LMNB2-201ENST00000325327 RPGRIP1Q96KN7 1286 aa17.77■□□□□ 0.44
LMNB2-201ENST00000325327 NAGPAQ9UK23 515 aa17.77■□□□□ 0.44
LMNB2-201ENST00000325327 A0A0G2JLL6 359 aaPredicted RBP17.77■□□□□ 0.44
LMNB2-201ENST00000325327 SPATA31C2B4DYI2 1134 aa17.77■□□□□ 0.44
LMNB2-201ENST00000325327 VIMP08670 466 aaKnown RBP17.77■□□□□ 0.44
LMNB2-201ENST00000325327 EIF4BP23588 611 aaKnown RBP17.77■□□□□ 0.44
LMNB2-201ENST00000325327 GALCP54803 685 aa17.77■□□□□ 0.44
LMNB2-201ENST00000325327 PRRT2Q7Z6L0 340 aaPredicted RBP17.77■□□□□ 0.44
LMNB2-201ENST00000325327 ANKRD42Q8N9B4 389 aa17.77■□□□□ 0.44
LMNB2-201ENST00000325327 GDAP1Q8TB36 358 aa17.77■□□□□ 0.44
LMNB2-201ENST00000325327 DHX38Q92620 1227 aaKnown RBP17.77■□□□□ 0.44
LMNB2-201ENST00000325327 USP27XA6NNY8 438 aa17.77■□□□□ 0.43
LMNB2-201ENST00000325327 CYB561D2O14569 222 aa17.77■□□□□ 0.43
LMNB2-201ENST00000325327 TLR2O60603 784 aa17.77■□□□□ 0.43
LMNB2-201ENST00000325327 IRF1P10914 325 aa17.77■□□□□ 0.43
LMNB2-201ENST00000325327 ACAT1P24752 427 aaKnown RBP17.77■□□□□ 0.43
LMNB2-201ENST00000325327 CASP5P51878 434 aa17.77■□□□□ 0.43
LMNB2-201ENST00000325327 CCL14Q16627 93 aa17.77■□□□□ 0.43
LMNB2-201ENST00000325327 BBS9Q3SYG4 887 aa17.77■□□□□ 0.43
LMNB2-201ENST00000325327 ASAP3Q8TDY4 903 aa17.77■□□□□ 0.43
LMNB2-201ENST00000325327 FAM84AQ96KN4 292 aa17.77■□□□□ 0.43
LMNB2-201ENST00000325327 INPP4AQ96PE3 977 aaPredicted RBP17.77■□□□□ 0.43
LMNB2-201ENST00000325327 SDK1Q7Z5N4 2213 aa17.77■□□□□ 0.43
LMNB2-201ENST00000325327 MUTP22033 750 aa17.77■□□□□ 0.43
LMNB2-201ENST00000325327 GBP1P32455 592 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms