RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 GPC3P51654 580 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 NCKAP1LP55160 1127 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 PPATQ06203 517 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 SUPT20HL1Q3ZLR7 823 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 DUPD1Q68J44 220 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 PNMA8AQ86V59 439 aaPredicted RBP10.7□□□□□ -0.7
HMGCR-201ENST00000287936 ELAC2Q9BQ52 826 aaKnown RBP10.7□□□□□ -0.7
HMGCR-201ENST00000287936 KIFC3Q9BVG8 833 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 SLC38A10Q9HBR0 1119 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 PCYOX1Q9UHG3 505 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 ATXN2Q99700 1313 aaKnown RBP10.7□□□□□ -0.7
HMGCR-201ENST00000287936 LTBP4Q8N2S1 1624 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 PTGER2P43116 358 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 TAP1Q03518 808 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 APBB1IPQ7Z5R6 666 aaPredicted RBP10.7□□□□□ -0.7
HMGCR-201ENST00000287936 ZNF280CQ8ND82 737 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 SHC3Q92529 594 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 HEMGNQ9BXL5 484 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 COL2A1P02458 1487 aaPredicted RBP10.7□□□□□ -0.7
HMGCR-201ENST00000287936 CYP1A2P05177 515 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 SNX16P57768 344 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 SV2AQ7L0J3 742 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 APOBEC3FQ8IUX4 373 aaKnown RBP10.7□□□□□ -0.7
HMGCR-201ENST00000287936 PASD1Q8IV76 773 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 PGM2Q96G03 612 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 FERMT1Q9BQL6 677 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 AVENQ9NQS1 362 aaPredicted RBP10.7□□□□□ -0.7
HMGCR-201ENST00000287936 CYP26B1Q9NR63 512 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 AJAP1Q9UKB5 411 aaPredicted RBP10.7□□□□□ -0.7
HMGCR-201ENST00000287936 ZMYM2Q9UBW7 1377 aa10.7□□□□□ -0.7
HMGCR-201ENST00000287936 VCAM1P19320 739 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 IBSPP21815 317 aaPredicted RBP10.69□□□□□ -0.7
HMGCR-201ENST00000287936 STAT4Q14765 748 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 TRADDQ15628 312 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 CYP4F22Q6NT55 531 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 YTHDF3Q7Z739 585 aaKnown RBP10.69□□□□□ -0.7
HMGCR-201ENST00000287936 CPA5Q8WXQ8 436 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 SMC6Q96SB8 1091 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 IKZF4Q9H2S9 585 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 CSADQ9Y600 493 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 EXOC1LA0A1B0GW35 172 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 PSTPIP1O43586 416 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 CAND2O75155 1236 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 KCNJ1P48048 391 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 ATP11AP98196 1134 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 MKRN3Q13064 507 aaKnown RBP10.69□□□□□ -0.7
HMGCR-201ENST00000287936 NEDD9Q14511 834 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 TMED2Q15363 201 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 IZUMO3Q5VZ72 239 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 ERICH1Q86X53 443 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 VSIG1Q86XK7 387 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 SERPINB12Q96P63 405 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 DDX56Q9NY93 547 aaKnown RBP10.69□□□□□ -0.7
HMGCR-201ENST00000287936 STRIP2Q9ULQ0 834 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 LRRD1A4D1F6 860 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 TISP43B9A030 160 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 SGK1O00141 431 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 ADRB2P07550 413 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 NUDT17P0C025 328 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 RFC5P40937 340 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 SF3A3Q12874 501 aaKnown RBP eCLIP10.69□□□□□ -0.71e-6■■■□□ 16.8
HMGCR-201ENST00000287936 RCOR2Q8IZ40 523 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 CHORDC1Q9UHD1 332 aaPredicted RBP10.69□□□□□ -0.7
HMGCR-201ENST00000287936 BAIAP2L1Q9UHR4 511 aa10.69□□□□□ -0.7
HMGCR-201ENST00000287936 PHF20L1A8MW92 1017 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 OPLAHO14841 1288 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 CHUKO15111 745 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 RNF8O76064 485 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 DPEP1P16444 411 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 EFNA5P52803 228 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 NBPF9Q3BBW0 867 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 LMBRD2Q68DH5 695 aaPredicted RBP10.68□□□□□ -0.7
HMGCR-201ENST00000287936 CENPUQ71F23 418 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 NCAPG2Q86XI2 1143 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 RBBP8NLQ8NC74 664 aaPredicted RBP10.68□□□□□ -0.7
HMGCR-201ENST00000287936 BORCS6Q96GS4 357 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 BTBD6Q96KE9 485 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 MRPL4Q9BYD3 311 aaKnown RBP10.68□□□□□ -0.7
HMGCR-201ENST00000287936 DNAJC17Q9NVM6 304 aaKnown RBP10.68□□□□□ -0.7
HMGCR-201ENST00000287936 YDJCA8MPS7 323 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 VGLL3A8MV65 326 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 PMM2O15305 246 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 TRAPPC3O43617 180 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 PYGMP11217 842 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 RPL21P46778 160 aaKnown RBP10.68□□□□□ -0.7
HMGCR-201ENST00000287936 ACTR2P61160 394 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 TFAMQ00059 246 aaKnown RBP10.68□□□□□ -0.7
HMGCR-201ENST00000287936 NUGGCQ68CJ6 796 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 DPH6Q7L8W6 267 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 PALM2Q8IXS6 379 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 SCYL3Q8IZE3 742 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 TTC13Q8NBP0 860 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 IL31RAQ8NI17 732 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 KRT35Q92764 455 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 P2RX7Q99572 595 aaKnown RBP10.68□□□□□ -0.7
HMGCR-201ENST00000287936 PI4K2AQ9BTU6 479 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 CD2APQ9Y5K6 639 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 BRAFP15056 766 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 CD58P19256 250 aa10.68□□□□□ -0.7
HMGCR-201ENST00000287936 HMGCS2P54868 508 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms