RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CACNA2D1P54289 1103 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 LRRC36Q1X8D7 754 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 EIF1ADQ8N9N8 165 aaKnown RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 ATXN2LQ8WWM7 1075 aaKnown RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 E2F7Q96AV8 911 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 PRKAB2O43741 272 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 IL6STP40189 918 aaPredicted RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 GEMIN4P57678 1058 aaKnown RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 GTF2IP78347 998 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 FMR1Q06787 632 aaKnown RBP eCLIP8.64□□□□□ -1.03
APOB-201ENST00000233242 SFSWAPQ12872 951 aaKnown RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 RBBP8NLQ8NC74 664 aaPredicted RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 CNDP1Q96KN2 507 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 PLAGL2Q9UPG8 496 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 KCNQ3O43525 872 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 TMEM253P0C7T8 217 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 TTC39BQ5VTQ0 682 aaPredicted RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 TBC1D10CQ8IV04 446 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 RNF139Q8WU17 664 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 GCLMP48507 274 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 SNRPFP62306 86 aaKnown RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 PTK7Q13308 1070 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 DCTN2Q13561 401 aaKnown RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 SPDYE1Q8NFV5 336 aaPredicted RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 MKNK1Q9BUB5 465 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 FAM153AQ9UHL3 310 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 HEY1Q9Y5J3 304 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 GOLGA4Q13439 2230 aaKnown RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 PIGHQ14442 188 aaPredicted RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 PCNX4Q63HM2 1172 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 ULK4Q96C45 1275 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 TUBA8Q9NY65 449 aaPredicted RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 NPEPPSP55786 919 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 PREPLQ4J6C6 727 aaPredicted RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 ANKRD40Q6AI12 368 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 MBD5Q9P267 1494 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 LIN7AO14910 233 aaPredicted RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 ATP6V1B1P15313 513 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 UCHL3P15374 230 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 MAPK7Q13164 816 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 RFX8Q6ZV50 586 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 TMEM51Q9NW97 253 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 DDX20Q9UHI6 824 aaKnown RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 NEDD4P46934 1319 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 KPNA4O00629 521 aaPredicted RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 ABLIM1O14639 778 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 P4HA2O15460 535 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 MYL2P10916 166 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 TARSP26639 723 aaKnown RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 SFNP31947 248 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 FIGNQ5HY92 759 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 CCDC80Q76M96 950 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 NLRP9Q7RTR0 991 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 GIMAP8Q8ND71 665 aaPredicted RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 ZNF280CQ8ND82 737 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 DPF2Q92785 391 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 RARGP13631 454 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 MAGED4Q96JG8 741 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 SH3GL1Q99961 368 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 KLHL25Q9H0H3 589 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 POTEMA6NI47 508 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 SOX6P35712 828 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 CEP78Q5JTW2 689 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 LARGE2Q8N3Y3 721 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 RMDN1Q96DB5 314 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 COPG2Q9UBF2 871 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 CNOT7Q9UIV1 285 aaKnown RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 FAM32AQ9Y421 112 aaKnown RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 PSMD3O43242 534 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 DLGAP3O95886 979 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 KCNA6P17658 529 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 RGS2P41220 211 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 KYAT1Q16773 422 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 LVRNQ6Q4G3 990 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 OXER1Q8TDS5 423 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 EPAS1Q99814 870 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 TBC1D22BQ9NU19 505 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 SEC24DO94855 1032 aaPredicted RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 GALCP54803 685 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 PAK5Q9P286 719 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 DBR1Q9UK59 544 aaKnown RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 CASP1P29466 404 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 KRT72Q14CN4 511 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 GALNT4Q8N4A0 578 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 APOL6Q9BWW8 343 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 TAGLN3Q9UI15 199 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 NCKAP5LQ9HCH0 1330 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 EIF2S1P05198 315 aaKnown RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 TSTA3Q13630 321 aaPredicted RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 PACS2Q86VP3 889 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 NIM1KQ8IY84 436 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 ACTRT1Q8TDG2 376 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 EXT2Q93063 718 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 CCDC28BQ9BUN5 200 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 ZNF556Q9HAH1 456 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 MYO3BQ8WXR4 1341 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 ALG13Q9NP73 1137 aaKnown RBP8.63□□□□□ -1.03
APOB-201ENST00000233242 CEP170Q5SW79 1584 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 H3BQF6 201 aa8.63□□□□□ -1.03
APOB-201ENST00000233242 TTKP33981 857 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms