RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ADAMTS4O75173 837 aa21.22■□□□□ 0.99
TNFRSF1A-201ENST00000162749 HLA-DRAP01903 254 aa21.22■□□□□ 0.99
TNFRSF1A-201ENST00000162749 YY1P25490 414 aa21.22■□□□□ 0.99
TNFRSF1A-201ENST00000162749 NKX3-2P78367 333 aa21.22■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CXCL17Q6UXB2 119 aa21.22■□□□□ 0.99
TNFRSF1A-201ENST00000162749 TMEM192Q8IY95 271 aa21.22■□□□□ 0.99
TNFRSF1A-201ENST00000162749 OLIG1Q8TAK6 271 aa21.22■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CDHR5Q9HBB8 845 aa21.22■□□□□ 0.99
TNFRSF1A-201ENST00000162749 SPC25Q9HBM1 224 aa21.22■□□□□ 0.99
TNFRSF1A-201ENST00000162749 ANXA13P27216 316 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 PIK3CAP42336 1068 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 SHC3Q92529 594 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 UBXN4Q92575 508 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 TATDN2Q93075 761 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 MTG1Q9BT17 334 aaPredicted RBP21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 SYT11Q9BT88 431 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 TSGA10Q9BZW7 698 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 A0A1B0GUA9 196 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 PJA2O43164 708 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CCDC172P0C7W6 258 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 MCF2P10911 925 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 FGFR4P22455 802 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 MFAP3P55082 362 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 SLC35F6Q8N357 371 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 FAM212AQ96EL1 285 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 OSMRQ99650 979 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 GCOM2Q9BZD3 368 aaPredicted RBP21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 XPNPEP3Q9NQH7 507 aa21.21■□□□□ 0.99
TNFRSF1A-201ENST00000162749 CXCL8P10145 99 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 GCNT1Q02742 428 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 BMS1Q14692 1282 aaKnown RBP21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 SURF1Q15526 300 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 C1orf112Q9NSG2 853 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 ZNF446Q9NWS9 450 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 NAGPAQ9UK23 515 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 GNAT1P11488 350 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 HOXD10P28358 340 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 AP3M2P53677 418 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 VPS36Q86VN1 386 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 FAM71AQ8IYT1 594 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 MTMR12Q9C0I1 747 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 NENFQ9UMX5 172 aa21.2■□□□□ 0.98
TNFRSF1A-201ENST00000162749 MACROD2A1Z1Q3 448 aa21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 HMGCRP04035 888 aa21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 STAG3L1P0CL83 205 aa21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 SCARA3Q6AZY7 606 aa21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 EFCAB13Q8IY85 973 aa21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 LUC7LQ9NQ29 371 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 OGFRQ9NZT2 677 aa21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 RALGAPA2Q2PPJ7 1873 aa21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 DDX3XO00571 662 aaKnown RBP eCLIP21.19■□□□□ 0.988e-9■■□□□ 12.8
TNFRSF1A-201ENST00000162749 B4GALT4O60513 344 aa21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 DARSP14868 501 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 MAP3K21Q5TCX8 1036 aa21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 SPOPLQ6IQ16 392 aa21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 ALKBH5Q6P6C2 394 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 LNX1Q8TBB1 728 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 RPF1Q9H9Y2 349 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-201ENST00000162749 MEFVO15553 781 aaPredicted RBP21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 CLTAP09496 248 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 EIF4BP23588 611 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 HOXA11P31270 313 aaPredicted RBP21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 USP8P40818 1118 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 NCOA4Q13772 614 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 NAB2Q15742 525 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 DUOXA2Q1HG44 320 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 NBPF20Q3BBV1 942 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 WDR44Q5JSH3 913 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 TRAPPC11Q7Z392 1133 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 GLYCTKQ8IVS8 523 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 SLC30A5Q8TAD4 765 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 TMEM40Q8WWA1 233 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 PACSIN1Q9BY11 444 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 GTF2IRD1Q9UHL9 959 aa21.18■□□□□ 0.98
TNFRSF1A-201ENST00000162749 CLCN6P51797 869 aa21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 RSRC2Q7L4I2 434 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 ENOSF1Q7L5Y1 443 aa21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 TXLNBQ8N3L3 684 aa21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 DHX38Q92620 1227 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 SECISBP2LQ93073 1101 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 EPC1Q9H2F5 836 aa21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 SALL4Q9UJQ4 1053 aa21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 PHACTR2O75167 634 aa21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 CST3P01034 146 aaPredicted RBP21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 TFAMQ00059 246 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 PCBP1Q15365 356 aaKnown RBP eCLIP21.17■□□□□ 0.982e-7■■■□□ 16.3
TNFRSF1A-201ENST00000162749 C10orf76Q5T2E6 689 aa21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 CATSPER4Q7RTX7 472 aa21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 KLHDC9Q8NEP7 349 aa21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 EPS8L1Q8TE68 723 aa21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 ADPGKQ9BRR6 497 aa21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 APOBEC3GQ9HC16 384 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 FRMPD3Q5JV73 1810 aa21.17■□□□□ 0.98
TNFRSF1A-201ENST00000162749 CYP26A1O43174 497 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 IL18RAPO95256 599 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 ASGR1P07306 291 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 NOP14P78316 857 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 SNX17Q15036 470 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 CCSAPQ6IQ19 270 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 TAF2Q6P1X5 1199 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms