RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFI1	YPL254W	RTC5	Q12108	567 aa	Known RBP	4.89	□□□□□ -1.63
HFI1	YPL254W	SKM1	Q12469	655 aa		4.89	□□□□□ -1.63
HFI1	YPL254W	PHO2	P07269	559 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	GAL7	P08431	366 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	RPL20A	P0CX23	172 aa	Known RBP	4.88	□□□□□ -1.63
HFI1	YPL254W	RPL20B	P0CX24	172 aa	Predicted RBP	4.88	□□□□□ -1.63
HFI1	YPL254W	SEC22	P22214	214 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	CPR3	P25719	182 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	VAM7	P32912	316 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	SLC1	P33333	303 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	YKL097C	P34245	136 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	YOR062C	P36025	268 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	ECM31	P38122	312 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	CHK1	P38147	527 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	MTC4	P38335	694 aa	Known RBP	4.88	□□□□□ -1.63
HFI1	YPL254W	FLO5	P38894	1075 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	OTU1	P43558	301 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	YHC3	P47040	408 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	YGL235W	P53071	178 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	YGL159W	P53110	370 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	OKP1	P53298	406 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	YPL113C	Q02961	396 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	PEX30	Q06169	523 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	HEM25	Q07534	307 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	RDR1	Q08904	546 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	YPL272C	Q08984	517 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	YLR108C	Q12259	485 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	ERG27	Q12452	347 aa	Known RBP	4.88	□□□□□ -1.63
HFI1	YPL254W	MDM35	O60200	86 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	TDH2	P00358	332 aa	Known RBP	4.88	□□□□□ -1.63
HFI1	YPL254W	SGA1	P08019	549 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	MRP2	P10663	115 aa	Predicted RBP	4.88	□□□□□ -1.63
HFI1	YPL254W	PPH21	P23594	369 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	STE50	P25344	346 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	YCR006C	P25350	157 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	TIP1	P27654	210 aa	Predicted RBP	4.88	□□□□□ -1.63
HFI1	YPL254W	EMP24	P32803	203 aa	Known RBP	4.88	□□□□□ -1.63
HFI1	YPL254W	PDC2	P32896	925 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	VPS51	P36116	164 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	SDS24	P38314	527 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	LAG1	P38703	411 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	TRR2	P38816	342 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	UTP25	P40498	721 aa	Known RBP	4.88	□□□□□ -1.63
HFI1	YPL254W	COQ5	P49017	307 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	RSM27	P53305	110 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
HFI1	YPL254W	PEX25	Q02969	394 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	SPC19	Q03954	165 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	DCS1	Q06151	350 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	ANT1	Q06497	328 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	BTS1	Q12051	335 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	AHC1	Q12433	566 aa		4.88	□□□□□ -1.63
HFI1	YPL254W	YLR302C	O13544	120 aa		4.87	□□□□□ -1.63
HFI1	YPL254W	HOM3	P10869	527 aa		4.87	□□□□□ -1.63
HFI1	YPL254W	ARO3	P14843	370 aa	Known RBP	4.87	□□□□□ -1.63
HFI1	YPL254W	SSH4	P32343	579 aa		4.87	□□□□□ -1.63
HFI1	YPL254W	NSG1	P38837	291 aa		4.87	□□□□□ -1.63
HFI1	YPL254W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
HFI1	YPL254W	BMT5	P40493	336 aa		4.87	□□□□□ -1.63
HFI1	YPL254W	CFD1	P40558	293 aa		4.87	□□□□□ -1.63
HFI1	YPL254W	GLR1	P41921	483 aa	Known RBP	4.87	□□□□□ -1.63
HFI1	YPL254W	MCM22	P47167	239 aa		4.87	□□□□□ -1.63
HFI1	YPL254W	SNN1	P48232	102 aa		4.87	□□□□□ -1.63
HFI1	YPL254W	RHO3	Q00245	231 aa	Known RBP	4.87	□□□□□ -1.63
HFI1	YPL254W	YPR127W	Q06494	345 aa		4.87	□□□□□ -1.63
HFI1	YPL254W	GRC3	Q07845	632 aa		4.87	□□□□□ -1.63
HFI1	YPL254W	ODC2	Q99297	307 aa		4.87	□□□□□ -1.63
HFI1	YPL254W	FSH3	Q99369	266 aa		4.87	□□□□□ -1.63
HFI1	YPL254W	PUT1	P09368	476 aa		4.86	□□□□□ -1.63
HFI1	YPL254W	ERG8	P24521	451 aa		4.86	□□□□□ -1.63
HFI1	YPL254W	PSD1	P39006	500 aa		4.86	□□□□□ -1.63
HFI1	YPL254W	TIF34	P40217	347 aa	Known RBP	4.86	□□□□□ -1.63
HFI1	YPL254W	SWM2	P40342	146 aa		4.86	□□□□□ -1.63
HFI1	YPL254W	LOH1	P47055	219 aa		4.86	□□□□□ -1.63
HFI1	YPL254W	GLO1	P50107	326 aa		4.86	□□□□□ -1.63
HFI1	YPL254W	YGL204C	P53089	101 aa		4.86	□□□□□ -1.63
HFI1	YPL254W	YGR250C	P53316	781 aa	Known RBP	4.86	□□□□□ -1.63
HFI1	YPL254W	OGG1	P53397	376 aa	Predicted RBP	4.86	□□□□□ -1.63
HFI1	YPL254W	PDR16	P53860	351 aa	Known RBP	4.86	□□□□□ -1.63
HFI1	YPL254W	RSM28	Q03430	361 aa		4.86	□□□□□ -1.63
HFI1	YPL254W	YPR091C	Q06833	770 aa		4.86	□□□□□ -1.63
HFI1	YPL254W	MCH4	Q08268	501 aa		4.86	□□□□□ -1.63
HFI1	YPL254W	LEU9	Q12166	604 aa	Known RBP	4.86	□□□□□ -1.63
HFI1	YPL254W	RRI1	Q12468	440 aa		4.86	□□□□□ -1.63
HFI1	YPL254W	CCH1	P50077	2039 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	REP2	P03872	296 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	RPB8	P20436	146 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	MXR2	P25566	168 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	PAN3	P36102	679 aa	Predicted RBP	4.85	□□□□□ -1.63
HFI1	YPL254W	YAL037W	P39728	267 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	GPI14	P47088	403 aa	Known RBP	4.85	□□□□□ -1.63
HFI1	YPL254W	UBP8	P50102	471 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	BRR6	P53062	197 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	ODC1	Q03028	310 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	SNX41	Q04053	625 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	SMA2	Q04658	369 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	DXO1	Q06349	442 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	YOR385W	Q08909	290 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	ORT1	Q12375	292 aa		4.85	□□□□□ -1.63
HFI1	YPL254W	TFC7	Q12415	435 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms