RNA–Protein interactions for RNA: YPL003W

ULA1, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene ULA1, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULA1	YPL003W	NHP6B	P11633	99 aa	Known RBP	4.65	□□□□□ -1.67
ULA1	YPL003W	HXT2	P23585	541 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	ERG4	P25340	473 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	PET18	P25362	215 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	ATG22	P25568	528 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	DBF20	P32328	564 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	RNP1	P32385	249 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	MSS1	P32559	526 aa	Predicted RBP	4.65	□□□□□ -1.67
ULA1	YPL003W	REC104	P33323	182 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	SPC29	P33419	253 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	TAT1	P38085	619 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	MOH1	P38191	138 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	AVT7	P40501	490 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	GPI14	P47088	403 aa	Known RBP	4.65	□□□□□ -1.67
ULA1	YPL003W	YIP4	P53093	235 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	YGR045C	P53229	120 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	PCP1	P53259	346 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	RSM23	Q01163	450 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	ENV7	Q12003	364 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	SRL2	Q12020	392 aa		4.65	□□□□□ -1.67
ULA1	YPL003W	RPL11B	Q3E757	174 aa	Predicted RBP	4.65	□□□□□ -1.67
ULA1	YPL003W	RAD52	P06778	471 aa	Known RBP	4.64	□□□□□ -1.67
ULA1	YPL003W	RPS16A	P0CX51	143 aa	Known RBP	4.64	□□□□□ -1.67
ULA1	YPL003W	RPS16B	P0CX52	143 aa	Known RBP	4.64	□□□□□ -1.67
ULA1	YPL003W	RNA14	P25298	677 aa	Known RBP	4.64	□□□□□ -1.67
ULA1	YPL003W	PPQ1	P32945	549 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	CLG1	P35190	452 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	UMP1	P38293	148 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	YHR122W	P38829	231 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	YIL060W	P40519	144 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	GPP1	P41277	250 aa	Known RBP	4.64	□□□□□ -1.67
ULA1	YPL003W	IDP2	P41939	412 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	CAF16	P43569	289 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	UBX6	P47049	396 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	ADO1	P47143	340 aa	Known RBP	4.64	□□□□□ -1.67
ULA1	YPL003W	MTL1	P53214	551 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	HRI1	Q05905	244 aa	Known RBP	4.64	□□□□□ -1.67
ULA1	YPL003W	HEM25	Q07534	307 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	RSC58	Q07979	502 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	ALG6	Q12001	544 aa	Known RBP	4.64	□□□□□ -1.67
ULA1	YPL003W	ISA2	Q12425	185 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	RDI1	Q12434	202 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	ODC2	Q99297	307 aa		4.64	□□□□□ -1.67
ULA1	YPL003W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
ULA1	YPL003W	COX5B	P00425	151 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	RPL7A	P05737	244 aa	Known RBP	4.63	□□□□□ -1.67
ULA1	YPL003W	URA6	P15700	204 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	YCP4	P25349	247 aa	Known RBP	4.63	□□□□□ -1.67
ULA1	YPL003W	SED4	P25365	1065 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	ADH7	P25377	361 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	PCL2	P25693	308 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	NNK1	P36003	928 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	UTP30	P36144	274 aa	Known RBP	4.63	□□□□□ -1.67
ULA1	YPL003W	MRPL39	P36533	70 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	YIL169C	P40442	995 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	BUD8	P41698	603 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	YJL016W	P47072	561 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	BXI1	P48558	297 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	NIT3	P49954	291 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	YGR042W	P53227	271 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	FMP48	P53233	369 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	RSM27	P53305	110 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	YNR048W	P53740	393 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	ELA1	P53861	379 aa	Predicted RBP	4.63	□□□□□ -1.67
ULA1	YPL003W	RNH201	P53942	307 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	HHT1	P61830	136 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	BUD25	P85052	153 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	HNT1	Q04344	158 aa	Known RBP	4.63	□□□□□ -1.67
ULA1	YPL003W	YLR283W	Q05867	314 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	GAS2	Q06135	555 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	YLR031W	Q07978	186 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	YPL272C	Q08984	517 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
ULA1	YPL003W	RPL7B	Q12213	244 aa	Known RBP	4.63	□□□□□ -1.67
ULA1	YPL003W	YDL180W	Q12301	547 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	IRA1	P18963	3092 aa		4.63	□□□□□ -1.67
ULA1	YPL003W	TDH2	P00358	332 aa	Known RBP	4.62	□□□□□ -1.67
ULA1	YPL003W	MES1	P00958	751 aa	Known RBP	4.62	□□□□□ -1.67
ULA1	YPL003W	URA3	P03962	267 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	SGA1	P08019	549 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	RPL3	P14126	387 aa	Known RBP	4.62	□□□□□ -1.67
ULA1	YPL003W	DBP2	P24783	546 aa	Known RBP	4.62	□□□□□ -1.67
ULA1	YPL003W	RFA3	P26755	122 aa	Known RBP	4.62	□□□□□ -1.67
ULA1	YPL003W	AFG1	P32317	509 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	PPZ2	P33329	710 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	TCM62	P38228	572 aa	Known RBP	4.62	□□□□□ -1.67
ULA1	YPL003W	YEL057C	P39983	233 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	TOK1	P40310	691 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	PHB1	P40961	287 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	CTK2	P46962	323 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	LSM1	P47017	172 aa	Known RBP	4.62	□□□□□ -1.67
ULA1	YPL003W	AVT4	P50944	713 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	YGL159W	P53110	370 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	RPN14	P53196	417 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	MRPL50	P53724	139 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	SUR7	P54003	302 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	MRP51	Q02950	344 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	YAP6	Q03935	383 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	COQ11	Q05892	277 aa		4.62	□□□□□ -1.67
ULA1	YPL003W	YOR385W	Q08909	290 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 248.4 ms