RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W SEI1Q06058 285 aa1.92□□□□□ -2.1
PEP12YOR036W YPR172WQ06608 200 aa1.92□□□□□ -2.1
PEP12YOR036W SYC1Q08553 188 aaPredicted RBP1.92□□□□□ -2.1
PEP12YOR036W IES4Q08561 116 aa1.92□□□□□ -2.1
PEP12YOR036W RRS1Q08746 203 aaKnown RBP1.92□□□□□ -2.1
PEP12YOR036W TIM22Q12328 207 aa1.92□□□□□ -2.1
PEP12YOR036W IES3Q12345 250 aa1.92□□□□□ -2.1
PEP12YOR036W PAN1P32521 1480 aa1.91□□□□□ -2.1
PEP12YOR036W SPT3P06844 337 aa1.91□□□□□ -2.1
PEP12YOR036W COQ1P18900 473 aa1.91□□□□□ -2.1
PEP12YOR036W PPH21P23594 369 aa1.91□□□□□ -2.1
PEP12YOR036W NTF2P33331 125 aaKnown RBP1.91□□□□□ -2.1
PEP12YOR036W CAB3P36076 571 aa1.91□□□□□ -2.1
PEP12YOR036W RIB1P38066 345 aa1.91□□□□□ -2.1
PEP12YOR036W CUE1P38428 203 aa1.91□□□□□ -2.1
PEP12YOR036W YHR127WP38833 243 aaKnown RBP1.91□□□□□ -2.1
PEP12YOR036W SPL2P38839 148 aa1.91□□□□□ -2.1
PEP12YOR036W TEM1P38987 245 aa1.91□□□□□ -2.1
PEP12YOR036W YHB1P39676 399 aaKnown RBP1.91□□□□□ -2.1
PEP12YOR036W YIR035CP40579 254 aa1.91□□□□□ -2.1
PEP12YOR036W YJL028WP47062 111 aa1.91□□□□□ -2.1
PEP12YOR036W MIC26P50087 233 aa1.91□□□□□ -2.1
PEP12YOR036W YDR124WQ04608 324 aa1.91□□□□□ -2.1
PEP12YOR036W YPS3Q12303 508 aa1.91□□□□□ -2.1
PEP12YOR036W GIS3Q12418 502 aa1.91□□□□□ -2.1
PEP12YOR036W YPL247CQ12523 523 aa1.91□□□□□ -2.1
PEP12YOR036W ISD11Q6Q560 94 aa1.91□□□□□ -2.1
PEP12YOR036W YEL009C-AA0A023PZF2 135 aa1.9□□□□□ -2.11
PEP12YOR036W CDC36P06100 191 aaPredicted RBP1.9□□□□□ -2.11
PEP12YOR036W CDC33P07260 213 aaKnown RBP1.9□□□□□ -2.11
PEP12YOR036W BCY1P07278 416 aaKnown RBP1.9□□□□□ -2.11
PEP12YOR036W SNA3P14359 133 aa1.9□□□□□ -2.11
PEP12YOR036W ERD2P18414 219 aa1.9□□□□□ -2.11
PEP12YOR036W YMR31P19955 123 aa1.9□□□□□ -2.11
PEP12YOR036W AGA2P32781 87 aa1.9□□□□□ -2.11
PEP12YOR036W SFC1P33303 322 aa1.9□□□□□ -2.11
PEP12YOR036W AST1P35183 429 aa1.9□□□□□ -2.11
PEP12YOR036W MIC12P38341 106 aa1.9□□□□□ -2.11
PEP12YOR036W SIP3P38717 1229 aa1.9□□□□□ -2.11
PEP12YOR036W PRE6P40303 254 aaKnown RBP1.9□□□□□ -2.11
PEP12YOR036W MCM22P47167 239 aa1.9□□□□□ -2.11
PEP12YOR036W YJR149WP47177 404 aa1.9□□□□□ -2.11
PEP12YOR036W NSA1P53136 463 aaPredicted RBP1.9□□□□□ -2.11
PEP12YOR036W YNL046WP53956 172 aa1.9□□□□□ -2.11
PEP12YOR036W GOT1Q03554 138 aa1.9□□□□□ -2.11
PEP12YOR036W BNA7Q04066 261 aa1.9□□□□□ -2.11
PEP12YOR036W EMI1Q04406 187 aa1.9□□□□□ -2.11
PEP12YOR036W YMR114CQ04471 368 aaKnown RBP1.9□□□□□ -2.11
PEP12YOR036W YOR186WQ08560 144 aa1.9□□□□□ -2.11
PEP12YOR036W YPL150WQ12152 901 aa1.9□□□□□ -2.11
PEP12YOR036W YPR063CQ12160 140 aa1.9□□□□□ -2.11
PEP12YOR036W YLR126CQ12288 251 aa1.9□□□□□ -2.11
PEP12YOR036W EMP46Q12396 444 aa1.9□□□□□ -2.11
PEP12YOR036W NOT5Q12514 560 aaPredicted RBP1.9□□□□□ -2.11
PEP12YOR036W YKL183C-AQ3E765 70 aa1.9□□□□□ -2.11
PEP12YOR036W YBL008W-AQ3E821 79 aa1.9□□□□□ -2.11
PEP12YOR036W NUP157P40064 1391 aaKnown RBP1.89□□□□□ -2.11
PEP12YOR036W YBR121C-AP0C5L4 52 aa1.89□□□□□ -2.11
PEP12YOR036W TOM40P23644 387 aaKnown RBP1.89□□□□□ -2.11
PEP12YOR036W CDC10P25342 322 aaKnown RBP1.89□□□□□ -2.11
PEP12YOR036W TKL2P33315 681 aa1.89□□□□□ -2.11
PEP12YOR036W GDH2P33327 1092 aaKnown RBP1.89□□□□□ -2.11
PEP12YOR036W PRP18P33411 251 aaPredicted RBP1.89□□□□□ -2.11
PEP12YOR036W PRY2P36110 329 aa1.89□□□□□ -2.11
PEP12YOR036W MRPL39P36533 70 aa1.89□□□□□ -2.11
PEP12YOR036W MAL32P38158 584 aa1.89□□□□□ -2.11
PEP12YOR036W ECM14P38836 430 aa1.89□□□□□ -2.11
PEP12YOR036W ERG28P40030 148 aa1.89□□□□□ -2.11
PEP12YOR036W ECO1P43605 281 aa1.89□□□□□ -2.11
PEP12YOR036W NIF3P53081 288 aa1.89□□□□□ -2.11
PEP12YOR036W MAL12P53341 584 aa1.89□□□□□ -2.11
PEP12YOR036W ALG9P53868 555 aaKnown RBP1.89□□□□□ -2.11
PEP12YOR036W MRPS17Q03246 237 aaPredicted RBP1.89□□□□□ -2.11
PEP12YOR036W FCF1Q05498 189 aaPredicted RBP1.89□□□□□ -2.11
PEP12YOR036W YPL229WQ99395 206 aa1.89□□□□□ -2.11
PEP12YOR036W QCR6P00127 147 aa1.88□□□□□ -2.11
PEP12YOR036W STE18P18852 110 aa1.88□□□□□ -2.11
PEP12YOR036W RAD51P25454 400 aa1.88□□□□□ -2.11
PEP12YOR036W SSO1P32867 290 aa1.88□□□□□ -2.11
PEP12YOR036W PRX1P34227 261 aaKnown RBP1.88□□□□□ -2.11
PEP12YOR036W YER189WP40104 122 aa1.88□□□□□ -2.11
PEP12YOR036W YIL059CP40520 121 aa1.88□□□□□ -2.11
PEP12YOR036W BUD13P46947 266 aaPredicted RBP1.88□□□□□ -2.11
PEP12YOR036W RAD17P48581 401 aa1.88□□□□□ -2.11
PEP12YOR036W TRM9P49957 279 aa1.88□□□□□ -2.11
PEP12YOR036W CWC23P52868 283 aaPredicted RBP1.88□□□□□ -2.11
PEP12YOR036W MIG2P53035 382 aa1.88□□□□□ -2.11
PEP12YOR036W MDM34P53083 459 aa1.88□□□□□ -2.11
PEP12YOR036W TOS8P53147 276 aa1.88□□□□□ -2.11
PEP12YOR036W IGO1P53897 168 aa1.88□□□□□ -2.11
PEP12YOR036W CDC123Q05791 360 aa1.88□□□□□ -2.11
PEP12YOR036W SSQ1Q05931 657 aaPredicted RBP1.88□□□□□ -2.11
PEP12YOR036W YOL019WQ08157 551 aa1.88□□□□□ -2.11
PEP12YOR036W TPO4Q12256 659 aa1.88□□□□□ -2.11
PEP12YOR036W DCN1Q12395 269 aa1.88□□□□□ -2.11
PEP12YOR036W HIS3P06633 220 aa1.87□□□□□ -2.11
PEP12YOR036W RPS23AP0CX29 145 aaKnown RBP1.87□□□□□ -2.11
PEP12YOR036W RPS23BP0CX30 145 aa1.87□□□□□ -2.11
PEP12YOR036W SEC22P22214 214 aa1.87□□□□□ -2.11
PEP12YOR036W RNP1P32385 249 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms