RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W YBL008W-AQ3E821 79 aa1.18□□□□□ -2.22
DDR48YMR173W SAS5Q99314 248 aa1.18□□□□□ -2.22
DDR48YMR173W CDC7P06243 507 aa1.17□□□□□ -2.22
DDR48YMR173W VPS3P23643 1011 aa1.17□□□□□ -2.22
DDR48YMR173W QRI5P32344 111 aa1.17□□□□□ -2.22
DDR48YMR173W MRPL37P36532 105 aa1.17□□□□□ -2.22
DDR48YMR173W DOG1P38774 246 aa1.17□□□□□ -2.22
DDR48YMR173W PEP8P40335 379 aa1.17□□□□□ -2.22
DDR48YMR173W RPL10P41805 221 aaKnown RBP1.17□□□□□ -2.22
DDR48YMR173W OST2P46964 130 aa1.17□□□□□ -2.22
DDR48YMR173W YGL034CP53186 121 aa1.17□□□□□ -2.22
DDR48YMR173W ALG11P53954 548 aaKnown RBP1.17□□□□□ -2.22
DDR48YMR173W SNF8Q12483 233 aa1.17□□□□□ -2.22
DDR48YMR173W RCN1P36054 211 aa1.16□□□□□ -2.22
DDR48YMR173W PRS4P38063 326 aaPredicted RBP1.16□□□□□ -2.22
DDR48YMR173W SSH1P38353 490 aaKnown RBP1.16□□□□□ -2.22
DDR48YMR173W PRS2P38620 318 aaKnown RBP1.16□□□□□ -2.22
DDR48YMR173W YHB1P39676 399 aaKnown RBP1.16□□□□□ -2.22
DDR48YMR173W YAR1P46683 200 aa1.16□□□□□ -2.22
DDR48YMR173W COX20Q04935 205 aa1.16□□□□□ -2.22
DDR48YMR173W POL30P15873 258 aaKnown RBP1.15□□□□□ -2.23
DDR48YMR173W DAL82P21705 255 aa1.15□□□□□ -2.23
DDR48YMR173W SEC22P22214 214 aa1.15□□□□□ -2.23
DDR48YMR173W EHD3P28817 500 aa1.15□□□□□ -2.23
DDR48YMR173W JEN1P36035 616 aa1.15□□□□□ -2.23
DDR48YMR173W COS8P38723 381 aa1.15□□□□□ -2.23
DDR48YMR173W YDR124WQ04608 324 aa1.15□□□□□ -2.23
DDR48YMR173W ATG17Q06410 417 aa1.15□□□□□ -2.23
DDR48YMR173W RRP36Q12481 300 aaPredicted RBP1.15□□□□□ -2.23
DDR48YMR173W MSF1P08425 469 aa1.14□□□□□ -2.23
DDR48YMR173W MRP1P10662 321 aaKnown RBP1.14□□□□□ -2.23
DDR48YMR173W SMB1P40018 196 aaKnown RBP1.14□□□□□ -2.23
DDR48YMR173W YER189WP40104 122 aa1.14□□□□□ -2.23
DDR48YMR173W MEP1P40260 492 aa1.14□□□□□ -2.23
DDR48YMR173W SNZ3P43545 298 aa1.14□□□□□ -2.23
DDR48YMR173W MRH4P53166 561 aa1.14□□□□□ -2.23
DDR48YMR173W PRM15Q03262 622 aa1.14□□□□□ -2.23
DDR48YMR173W ADH6Q04894 360 aaKnown RBP1.14□□□□□ -2.23
DDR48YMR173W KAP95Q06142 861 aaKnown RBP1.14□□□□□ -2.23
DDR48YMR173W YLR179CQ06252 201 aaKnown RBP1.14□□□□□ -2.23
DDR48YMR173W YPR147CQ06522 304 aaKnown RBP1.14□□□□□ -2.23
DDR48YMR173W COQ10Q08058 207 aa1.14□□□□□ -2.23
DDR48YMR173W BBP1Q12365 385 aa1.14□□□□□ -2.23
DDR48YMR173W MHT1Q12525 324 aa1.14□□□□□ -2.23
DDR48YMR173W YLR462WO13556 202 aa1.13□□□□□ -2.23
DDR48YMR173W Q0255P03881 472 aa1.13□□□□□ -2.23
DDR48YMR173W YKR104WP0CE69 306 aa1.13□□□□□ -2.23
DDR48YMR173W HOM6P31116 359 aaKnown RBP1.13□□□□□ -2.23
DDR48YMR173W RIB7P33312 244 aa1.13□□□□□ -2.23
DDR48YMR173W MRX3P38172 270 aa1.13□□□□□ -2.23
DDR48YMR173W YEL075CP39972 122 aa1.13□□□□□ -2.23
DDR48YMR173W THO1P40040 218 aaKnown RBP1.13□□□□□ -2.23
DDR48YMR173W ARC15P40518 154 aaRIP-Chip data1.13□□□□□ -2.23not detected
DDR48YMR173W SMD3P43321 101 aaKnown RBP1.13□□□□□ -2.23
DDR48YMR173W GLG2P47011 380 aa1.13□□□□□ -2.23
DDR48YMR173W MPP6P53725 186 aaPredicted RBP1.13□□□□□ -2.23
DDR48YMR173W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
DDR48YMR173W MZM1Q03429 123 aaPredicted RBP1.13□□□□□ -2.23
DDR48YMR173W GOT1Q03554 138 aa1.13□□□□□ -2.23
DDR48YMR173W INM2Q05533 292 aa1.13□□□□□ -2.23
DDR48YMR173W SYC1Q08553 188 aaPredicted RBP1.13□□□□□ -2.23
DDR48YMR173W CSM4Q08955 156 aa1.13□□□□□ -2.23
DDR48YMR173W SWI1P09547 1314 aa1.13□□□□□ -2.23
DDR48YMR173W RAS2P01120 322 aaKnown RBP1.12□□□□□ -2.23
DDR48YMR173W YHR032W-AP0C5N6 59 aa1.12□□□□□ -2.23
DDR48YMR173W FBA1P14540 359 aaKnown RBP1.12□□□□□ -2.23
DDR48YMR173W SCL1P21243 252 aaKnown RBP1.12□□□□□ -2.23
DDR48YMR173W MSA2P36157 363 aa1.12□□□□□ -2.23
DDR48YMR173W YBR096WP38256 230 aa1.12□□□□□ -2.23
DDR48YMR173W BIG1P38813 335 aa1.12□□□□□ -2.23
DDR48YMR173W YHR125WP38831 101 aa1.12□□□□□ -2.23
DDR48YMR173W CTF19Q02732 369 aa1.12□□□□□ -2.23
DDR48YMR173W YDR209CQ03480 137 aa1.12□□□□□ -2.23
DDR48YMR173W KRE28Q04431 385 aa1.12□□□□□ -2.23
DDR48YMR173W SDO1Q07953 250 aaKnown RBP1.12□□□□□ -2.23
DDR48YMR173W MED4Q12343 284 aa1.12□□□□□ -2.23
DDR48YMR173W COX5AP00424 153 aa1.11□□□□□ -2.23
DDR48YMR173W RSR1P13856 272 aa1.11□□□□□ -2.23
DDR48YMR173W RNA15P25299 296 aaPredicted RBP1.11□□□□□ -2.23
DDR48YMR173W YUH1P35127 236 aa1.11□□□□□ -2.23
DDR48YMR173W FZO1P38297 855 aa1.11□□□□□ -2.23
DDR48YMR173W GOS1P38736 223 aa1.11□□□□□ -2.23
DDR48YMR173W CTR2P38865 189 aa1.11□□□□□ -2.23
DDR48YMR173W YGL159WP53110 370 aa1.11□□□□□ -2.23
DDR48YMR173W YGR026WP53217 278 aa1.11□□□□□ -2.23
DDR48YMR173W MRPL50P53724 139 aa1.11□□□□□ -2.23
DDR48YMR173W SNZ2P53824 298 aa1.11□□□□□ -2.23
DDR48YMR173W SRL4Q03085 281 aa1.11□□□□□ -2.23
DDR48YMR173W YMR279CQ03263 540 aa1.11□□□□□ -2.23
DDR48YMR173W SPG4Q04438 115 aa1.11□□□□□ -2.23
DDR48YMR173W FAR8Q05040 523 aa1.11□□□□□ -2.23
DDR48YMR173W YPR098CQ06089 161 aa1.11□□□□□ -2.23
DDR48YMR173W YLR173WQ06247 608 aa1.11□□□□□ -2.23
DDR48YMR173W YLR030WQ07967 263 aa1.11□□□□□ -2.23
DDR48YMR173W RRP40Q08285 240 aaKnown RBP1.11□□□□□ -2.23
DDR48YMR173W YOR186WQ08560 144 aa1.11□□□□□ -2.23
DDR48YMR173W BTS1Q12051 335 aa1.11□□□□□ -2.23
DDR48YMR173W YOL162WP0CF19 215 aa1.1□□□□□ -2.23
DDR48YMR173W PEX4P29340 183 aa1.1□□□□□ -2.23
DDR48YMR173W SGE1P33335 543 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms