RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeast

Gene SHH3, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHH3	YMR118C	PRE2	P30656	287 aa	Known RBP	3.13	□□□□□ -1.91
SHH3	YMR118C	DCG1	P32460	244 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	ACP1	P32463	125 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	ERG1	P32476	496 aa	Known RBP	3.13	□□□□□ -1.91
SHH3	YMR118C	FMT1	P32785	401 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	SPT10	P35208	640 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	YOR062C	P36025	268 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	RIB5	P38145	238 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	POP8	P38208	133 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	POA1	P38218	177 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	VBA2	P38358	474 aa	Known RBP	3.13	□□□□□ -1.91
SHH3	YMR118C	YPT31	P38555	223 aa	Known RBP	3.13	□□□□□ -1.91
SHH3	YMR118C	AVT7	P40501	490 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	TAX4	P47030	604 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	GPI14	P47088	403 aa	Known RBP	3.13	□□□□□ -1.91
SHH3	YMR118C	ADO1	P47143	340 aa	Known RBP	3.13	□□□□□ -1.91
SHH3	YMR118C	CCC1	P47818	322 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	BXI1	P48558	297 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	VEL1	P53058	206 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	YGL235W	P53071	178 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	RNH70	P53331	553 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	OGG1	P53397	376 aa	Predicted RBP	3.13	□□□□□ -1.91
SHH3	YMR118C	BUD25	P85052	153 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	RSM10	Q03201	203 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	YML122C	Q03207	126 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	MRPS17	Q03246	237 aa	Predicted RBP	3.13	□□□□□ -1.91
SHH3	YMR118C	SMA2	Q04658	369 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	YMR253C	Q04835	414 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	SYM1	Q06563	197 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	MHR1	Q06630	226 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	XYL2	Q07993	356 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	RDR1	Q08904	546 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	ORT1	Q12375	292 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	COX19	Q3E731	98 aa		3.13	□□□□□ -1.91
SHH3	YMR118C	MEX67	Q99257	599 aa	Known RBP	3.13	□□□□□ -1.91
SHH3	YMR118C	YKR104W	P0CE69	306 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	HNM1	P19807	563 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	LAC1	P28496	418 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	FAA1	P30624	700 aa	Known RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
SHH3	YMR118C	TIM12	P32830	109 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	SUI1	P32911	108 aa	Known RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	SNC2	P33328	115 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	NTF2	P33331	125 aa	Known RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	YKL071W	P36086	256 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	TRM7	P38238	310 aa	Known RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	SPC25	P40014	221 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	DLS1	P40366	167 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	FLX1	P40464	311 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	PAU15	P40585	124 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	RTS2	P40962	232 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	AVT4	P50944	713 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	UFD1	P53044	361 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	YGL185C	P53100	379 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	FLC3	P53121	802 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	NPY1	P53164	384 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	YGR012W	P53206	393 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	MTM1	P53320	366 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	SCW4	P53334	386 aa	Known RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	MPA43	P53583	542 aa	Predicted RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	SUN4	P53616	420 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	YIF1	P53845	314 aa	Known RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	PNG1	Q02890	363 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	TMA23	Q03525	211 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	YML018C	Q03730	393 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	CAB5	Q03941	241 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	YDR387C	Q04162	555 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	CUE4	Q04201	117 aa	Predicted RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	RPC11	Q04307	110 aa	Predicted RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	HNT1	Q04344	158 aa	Known RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	SEN15	Q04675	128 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	ERP1	Q05359	219 aa	Known RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	MRX8	Q05473	314 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	MRX9	Q07349	420 aa	Known RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	RXT3	Q07458	294 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	BRX1	Q08235	291 aa	Known RBP	3.12	□□□□□ -1.91
SHH3	YMR118C	VPS68	Q12016	184 aa		3.12	□□□□□ -1.91
SHH3	YMR118C	MDM35	O60200	86 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	RPL25	P04456	142 aa	Known RBP	3.11	□□□□□ -1.91
SHH3	YMR118C	SCL1	P21243	252 aa	Known RBP	3.11	□□□□□ -1.91
SHH3	YMR118C	PPH21	P23594	369 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	PRE9	P23638	258 aa	Known RBP	3.11	□□□□□ -1.91
SHH3	YMR118C	PET18	P25362	215 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	AGP1	P25376	633 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	CDC50	P25656	391 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	POP5	P28005	173 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	ERG3	P32353	365 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	SRB5	P32585	307 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	SLC1	P33333	303 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	OAR1	P35731	278 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	MRPL28	P36527	147 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	YBR013C	P38215	129 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	TRS20	P38334	175 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	TAE1	P38340	232 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	RPP1	P38786	293 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	SUR2	P38992	349 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	GET2	P40056	285 aa		3.11	□□□□□ -1.91
SHH3	YMR118C	RPL13B	P40212	199 aa	Known RBP	3.11	□□□□□ -1.91
SHH3	YMR118C	YIL108W	P40483	696 aa	Known RBP	3.11	□□□□□ -1.91
SHH3	YMR118C	SMK1	P41808	388 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 83 ms