RNA–Protein interactions for RNA: YLR193C

UPS1, Transcript of Phosphatidic acid transfer protein, yeast

Gene UPS1, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPS1	YLR193C	JEN1	P36035	616 aa		0.88	□□□□□ -2.27
UPS1	YLR193C	BIG1	P38813	335 aa		0.88	□□□□□ -2.27
UPS1	YLR193C	YGL034C	P53186	121 aa		0.88	□□□□□ -2.27
UPS1	YLR193C	RSM10	Q03201	203 aa		0.88	□□□□□ -2.27
UPS1	YLR193C	ADH6	Q04894	360 aa	Known RBP	0.88	□□□□□ -2.27
UPS1	YLR193C	KAP95	Q06142	861 aa	Known RBP	0.88	□□□□□ -2.27
UPS1	YLR193C	BTS1	Q12051	335 aa		0.88	□□□□□ -2.27
UPS1	YLR193C	YOL107W	Q12239	342 aa		0.88	□□□□□ -2.27
UPS1	YLR193C	SNF8	Q12483	233 aa		0.88	□□□□□ -2.27
UPS1	YLR193C	BOL1	Q3E793	110 aa		0.88	□□□□□ -2.27
UPS1	YLR193C	YBL008W-A	Q3E821	79 aa		0.88	□□□□□ -2.27
UPS1	YLR193C	RAD3	P06839	778 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	SGA1	P08019	549 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	MSF1	P08425	469 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	RPT5	P33297	434 aa	Known RBP	0.87	□□□□□ -2.27
UPS1	YLR193C	RCN1	P36054	211 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	PRS4	P38063	326 aa	Predicted RBP	0.87	□□□□□ -2.27
UPS1	YLR193C	SSH1	P38353	490 aa	Known RBP	0.87	□□□□□ -2.27
UPS1	YLR193C	SMB1	P40018	196 aa	Known RBP	0.87	□□□□□ -2.27
UPS1	YLR193C	SNZ3	P43545	298 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	GLG2	P47011	380 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	CTF19	Q02732	369 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	YDR209C	Q03480	137 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	PEX12	Q04370	399 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	YLR179C	Q06252	201 aa	Known RBP	0.87	□□□□□ -2.27
UPS1	YLR193C	YPR147C	Q06522	304 aa	Known RBP	0.87	□□□□□ -2.27
UPS1	YLR193C	SDO1	Q07953	250 aa	Known RBP	0.87	□□□□□ -2.27
UPS1	YLR193C	COQ10	Q08058	207 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	RRT8	Q08219	342 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	EMP46	Q12396	444 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	SAS5	Q99314	248 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	SWI1	P09547	1314 aa		0.87	□□□□□ -2.27
UPS1	YLR193C	YKR104W	P0CE69	306 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	RSR1	P13856	272 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	CCA1	P21269	546 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	SEC22	P22214	214 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	YCR102C	P25608	368 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	HOM6	P31116	359 aa	Known RBP	0.86	□□□□□ -2.27
UPS1	YLR193C	MRX3	P38172	270 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	YBR096W	P38256	230 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	AYR1	P40471	297 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	OST2	P46964	130 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	MRH4	P53166	561 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	SNZ2	P53824	298 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	ASI3	P53983	676 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	GOT1	Q03554	138 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	YDR124W	Q04608	324 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	ATG17	Q06410	417 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	YOR029W	Q12243	111 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	BBP1	Q12365	385 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	INO80	P53115	1489 aa		0.86	□□□□□ -2.27
UPS1	YLR193C	CYR1	P08678	2026 aa	Known RBP	0.85	□□□□□ -2.27
UPS1	YLR193C	PUT1	P09368	476 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	RNA15	P25299	296 aa	Predicted RBP	0.85	□□□□□ -2.27
UPS1	YLR193C	SGE1	P33335	543 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	YUH1	P35127	236 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	MSA2	P36157	363 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	MRPL39	P36533	70 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	FZO1	P38297	855 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	COS8	P38723	381 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	GOS1	P38736	223 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	THO1	P40040	218 aa	Known RBP	0.85	□□□□□ -2.27
UPS1	YLR193C	YER189W	P40104	122 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	SNX4	P47057	423 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	USE1	P53146	245 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	DAD3	P69850	94 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
UPS1	YLR193C	SPG4	Q04438	115 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	YPR098C	Q06089	161 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	SYC1	Q08553	188 aa	Predicted RBP	0.85	□□□□□ -2.27
UPS1	YLR193C	YOR186W	Q08560	144 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	MSH5	Q12175	901 aa		0.85	□□□□□ -2.27
UPS1	YLR193C	YLR462W	O13556	202 aa		0.84	□□□□□ -2.27
UPS1	YLR193C	YHR032W-A	P0C5N6	59 aa		0.84	□□□□□ -2.27
UPS1	YLR193C	DOA4	P32571	926 aa		0.84	□□□□□ -2.27
UPS1	YLR193C	YHB1	P39676	399 aa	Known RBP	0.84	□□□□□ -2.27
UPS1	YLR193C	YEL075C	P39972	122 aa		0.84	□□□□□ -2.27
UPS1	YLR193C	LSM4	P40070	187 aa	Known RBP	0.84	□□□□□ -2.27
UPS1	YLR193C	SMD3	P43321	101 aa	Known RBP	0.84	□□□□□ -2.27
UPS1	YLR193C	BNA6	P43619	295 aa		0.84	□□□□□ -2.27
UPS1	YLR193C	YNL134C	P53912	376 aa	Known RBP	0.84	□□□□□ -2.27
UPS1	YLR193C	RHO3	Q00245	231 aa	Known RBP	0.84	□□□□□ -2.27
UPS1	YLR193C	RRP40	Q08285	240 aa	Known RBP	0.84	□□□□□ -2.27
UPS1	YLR193C	RRS1	Q08746	203 aa	Known RBP	0.84	□□□□□ -2.27
UPS1	YLR193C	YCT1	Q12235	531 aa		0.84	□□□□□ -2.27
UPS1	YLR193C	SNU23	Q12368	194 aa	Predicted RBP	0.84	□□□□□ -2.27
UPS1	YLR193C	Q0255	P03881	472 aa		0.83	□□□□□ -2.28
UPS1	YLR193C	TCP1	P12612	559 aa	Known RBP	0.83	□□□□□ -2.28
UPS1	YLR193C	ERG24	P32462	438 aa	Known RBP	0.83	□□□□□ -2.28
UPS1	YLR193C	YHR125W	P38831	101 aa		0.83	□□□□□ -2.28
UPS1	YLR193C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
UPS1	YLR193C	ARC15	P40518	154 aa	RIP-Chip data	0.83	□□□□□ -2.28	not detected
UPS1	YLR193C	JHD2	P47156	728 aa	Predicted RBP	0.83	□□□□□ -2.28
UPS1	YLR193C	YGL159W	P53110	370 aa		0.83	□□□□□ -2.28
UPS1	YLR193C	FAR8	Q05040	523 aa		0.83	□□□□□ -2.28
UPS1	YLR193C	YLR173W	Q06247	608 aa		0.83	□□□□□ -2.28
UPS1	YLR193C	YLR030W	Q07967	263 aa		0.83	□□□□□ -2.28
UPS1	YLR193C	CSM4	Q08955	156 aa		0.83	□□□□□ -2.28
UPS1	YLR193C	ATG31	Q12421	196 aa		0.83	□□□□□ -2.28
UPS1	YLR193C	MHT1	Q12525	324 aa		0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms