RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C YFR020WP43600 232 aa3.61□□□□□ -1.83
SRP40YKR092C PMT4P46971 762 aa3.61□□□□□ -1.83
SRP40YKR092C YJL118WP47022 219 aa3.61□□□□□ -1.83
SRP40YKR092C VPS25P47142 202 aa3.61□□□□□ -1.83
SRP40YKR092C ASN2P49090 572 aaKnown RBP3.61□□□□□ -1.83
SRP40YKR092C USE1P53146 245 aa3.61□□□□□ -1.83
SRP40YKR092C INN1P53901 409 aa3.61□□□□□ -1.83
SRP40YKR092C KTR5P53966 522 aaPredicted RBP3.61□□□□□ -1.83
SRP40YKR092C MAK3Q03503 176 aa3.61□□□□□ -1.83
SRP40YKR092C FMN1Q03778 218 aa3.61□□□□□ -1.83
SRP40YKR092C CNL1Q06333 122 aa3.61□□□□□ -1.83
SRP40YKR092C SAM4Q08985 325 aaKnown RBP3.61□□□□□ -1.83
SRP40YKR092C FSF1Q12029 327 aaKnown RBP3.61□□□□□ -1.83
SRP40YKR092C ATX2Q12067 313 aa3.61□□□□□ -1.83
SRP40YKR092C YLL056CQ12177 298 aa3.61□□□□□ -1.83
SRP40YKR092C TPO4Q12256 659 aa3.61□□□□□ -1.83
SRP40YKR092C PHO2P07269 559 aa3.6□□□□□ -1.83
SRP40YKR092C BCY1P07278 416 aaKnown RBP3.6□□□□□ -1.83
SRP40YKR092C ASP3-2P0CX77 362 aa3.6□□□□□ -1.83
SRP40YKR092C ASP3-3P0CX78 362 aa3.6□□□□□ -1.83
SRP40YKR092C ASP3-4P0CX79 362 aa3.6□□□□□ -1.83
SRP40YKR092C ASP3-1P0CZ17 362 aa3.6□□□□□ -1.83
SRP40YKR092C GCY1P14065 312 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SRP40YKR092C EXO70P19658 623 aa3.6□□□□□ -1.83
SRP40YKR092C MAG1P22134 296 aaKnown RBP3.6□□□□□ -1.83
SRP40YKR092C PUT3P25502 979 aaPredicted RBP3.6□□□□□ -1.83
SRP40YKR092C MSK1P32048 576 aa3.6□□□□□ -1.83
SRP40YKR092C CYS4P32582 507 aaKnown RBP3.6□□□□□ -1.83
SRP40YKR092C RAD23P32628 398 aaKnown RBP3.6□□□□□ -1.83
SRP40YKR092C FRE1P32791 686 aa3.6□□□□□ -1.83
SRP40YKR092C RCK1P38622 512 aa3.6□□□□□ -1.83
SRP40YKR092C DSE1P40077 573 aa3.6□□□□□ -1.83
SRP40YKR092C COG3P40094 801 aa3.6□□□□□ -1.83
SRP40YKR092C PRE6P40303 254 aaKnown RBP3.6□□□□□ -1.83
SRP40YKR092C DIM1P41819 318 aaKnown RBP3.6□□□□□ -1.83
SRP40YKR092C GAT1P43574 510 aa3.6□□□□□ -1.83
SRP40YKR092C GNA1P43577 159 aaPredicted RBP3.6□□□□□ -1.83
SRP40YKR092C TRM9P49957 279 aa3.6□□□□□ -1.83
SRP40YKR092C ROG1P53118 685 aa3.6□□□□□ -1.83
SRP40YKR092C FLC3P53121 802 aa3.6□□□□□ -1.83
SRP40YKR092C YGR026WP53217 278 aa3.6□□□□□ -1.83
SRP40YKR092C POP6P53218 158 aa3.6□□□□□ -1.83
SRP40YKR092C IBD2P53892 351 aa3.6□□□□□ -1.83
SRP40YKR092C RPL15BP54780 204 aaPredicted RBP3.6□□□□□ -1.83
SRP40YKR092C TIM8P57744 87 aa3.6□□□□□ -1.83
SRP40YKR092C ODC1Q03028 310 aa3.6□□□□□ -1.83
SRP40YKR092C TMA23Q03525 211 aa3.6□□□□□ -1.83
SRP40YKR092C TDA1Q03533 586 aa3.6□□□□□ -1.83
SRP40YKR092C CGI121Q03705 181 aaKnown RBP3.6□□□□□ -1.83
SRP40YKR092C GPI17Q04080 534 aa3.6□□□□□ -1.83
SRP40YKR092C YET2Q04210 160 aa3.6□□□□□ -1.83
SRP40YKR092C TRM12Q04235 462 aa3.6□□□□□ -1.83
SRP40YKR092C TVP18Q04767 167 aa3.6□□□□□ -1.83
SRP40YKR092C BNA5Q05979 453 aa3.6□□□□□ -1.83
SRP40YKR092C GAS2Q06135 555 aa3.6□□□□□ -1.83
SRP40YKR092C IPK1Q06667 281 aa3.6□□□□□ -1.83
SRP40YKR092C YDR018CQ12185 396 aa3.6□□□□□ -1.83
SRP40YKR092C GTT2Q12390 233 aa3.6□□□□□ -1.83
SRP40YKR092C IZH4Q99393 312 aa3.6□□□□□ -1.83
SRP40YKR092C ADH2P00331 348 aaKnown RBP3.59□□□□□ -1.83
SRP40YKR092C MF(ALPHA)1P01149 165 aa3.59□□□□□ -1.83
SRP40YKR092C CYC3P06182 269 aa3.59□□□□□ -1.83
SRP40YKR092C COR1P07256 457 aa3.59□□□□□ -1.83
SRP40YKR092C RPL31AP0C2H8 113 aaKnown RBP3.59□□□□□ -1.83
SRP40YKR092C RPL31BP0C2H9 113 aaKnown RBP3.59□□□□□ -1.83
SRP40YKR092C POF1P25576 258 aa3.59□□□□□ -1.83
SRP40YKR092C PPZ1P26570 692 aa3.59□□□□□ -1.83
SRP40YKR092C YPS1P32329 569 aa3.59□□□□□ -1.83
SRP40YKR092C NRP1P32770 719 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
SRP40YKR092C UTP30P36144 274 aaKnown RBP3.59□□□□□ -1.83
SRP40YKR092C ROT2P38138 954 aa3.59□□□□□ -1.83
SRP40YKR092C GOS1P38736 223 aa3.59□□□□□ -1.83
SRP40YKR092C DOG2P38773 246 aa3.59□□□□□ -1.83
SRP40YKR092C IPI1P38803 334 aaPredicted RBP3.59□□□□□ -1.83
SRP40YKR092C SHO1P40073 367 aa3.59□□□□□ -1.83
SRP40YKR092C FAU1P40099 211 aa3.59□□□□□ -1.83
SRP40YKR092C ERJ5P43613 295 aaPredicted RBP3.59□□□□□ -1.83
SRP40YKR092C XPT1P47165 209 aa3.59□□□□□ -1.83
SRP40YKR092C YDL186WP48568 277 aa3.59□□□□□ -1.83
SRP40YKR092C AVT4P50944 713 aa3.59□□□□□ -1.83
SRP40YKR092C COS10P52924 374 aa3.59□□□□□ -1.83
SRP40YKR092C ARO8P53090 500 aaKnown RBP3.59□□□□□ -1.83
SRP40YKR092C GTR2P53290 341 aa3.59□□□□□ -1.83
SRP40YKR092C OSH6Q02201 448 aa3.59□□□□□ -1.83
SRP40YKR092C YPL077CQ02831 240 aa3.59□□□□□ -1.83
SRP40YKR092C CTL1Q03220 320 aaKnown RBP3.59□□□□□ -1.83
SRP40YKR092C SCS7Q03529 384 aa3.59□□□□□ -1.83
SRP40YKR092C HPT1Q04178 221 aaKnown RBP3.59□□□□□ -1.83
SRP40YKR092C SEI1Q06058 285 aa3.59□□□□□ -1.83
SRP40YKR092C YTH1Q06102 208 aaPredicted RBP3.59□□□□□ -1.83
SRP40YKR092C GEP3Q08622 556 aa3.59□□□□□ -1.83
SRP40YKR092C USB1Q12208 290 aaKnown RBP3.59□□□□□ -1.83
SRP40YKR092C RGT2Q12300 763 aa3.59□□□□□ -1.83
SRP40YKR092C YDL199CQ12407 687 aa3.59□□□□□ -1.83
SRP40YKR092C PRP46Q12417 451 aaPredicted RBP3.59□□□□□ -1.83
SRP40YKR092C YPR1Q12458 312 aa3.59□□□□□ -1.83
SRP40YKR092C RRD2Q12461 358 aa3.59□□□□□ -1.83
SRP40YKR092C RMD5Q12508 421 aa3.59□□□□□ -1.83
SRP40YKR092C YBR298C-AQ8TGK4 73 aa3.59□□□□□ -1.83
SRP40YKR092C BI3Q9ZZW7 517 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms