RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C MSF1P08425 469 aa2.25□□□□□ -2.05
VPS25YJR102C SEC22P22214 214 aa2.25□□□□□ -2.05
VPS25YJR102C RNA15P25299 296 aaPredicted RBP2.25□□□□□ -2.05
VPS25YJR102C SGE1P33335 543 aa2.25□□□□□ -2.05
VPS25YJR102C PRS4P38063 326 aaPredicted RBP2.25□□□□□ -2.05
VPS25YJR102C SNZ3P43545 298 aa2.25□□□□□ -2.05
VPS25YJR102C BNA6P43619 295 aa2.25□□□□□ -2.05
VPS25YJR102C YDR124WQ04608 324 aa2.25□□□□□ -2.05
VPS25YJR102C SDO1Q07953 250 aaKnown RBP2.25□□□□□ -2.05
VPS25YJR102C RRP40Q08285 240 aaKnown RBP2.25□□□□□ -2.05
VPS25YJR102C RRS1Q08746 203 aaKnown RBP2.25□□□□□ -2.05
VPS25YJR102C BBP1Q12365 385 aa2.25□□□□□ -2.05
VPS25YJR102C SNF8Q12483 233 aa2.25□□□□□ -2.05
VPS25YJR102C YKR104WP0CE69 306 aa2.24□□□□□ -2.05
VPS25YJR102C USE1P53146 245 aa2.24□□□□□ -2.05
VPS25YJR102C YGL034CP53186 121 aa2.24□□□□□ -2.05
VPS25YJR102C CAB4P53332 305 aa2.24□□□□□ -2.05
VPS25YJR102C PEX12Q04370 399 aa2.24□□□□□ -2.05
VPS25YJR102C YOR029WQ12243 111 aa2.24□□□□□ -2.05
VPS25YJR102C SAS5Q99314 248 aa2.24□□□□□ -2.05
VPS25YJR102C MRPL39P36533 70 aa2.23□□□□□ -2.05
VPS25YJR102C MRX3P38172 270 aa2.23□□□□□ -2.05
VPS25YJR102C FZO1P38297 855 aa2.23□□□□□ -2.05
VPS25YJR102C YHL026CP38740 315 aa2.23□□□□□ -2.05
VPS25YJR102C RHO3Q00245 231 aaKnown RBP2.23□□□□□ -2.05
VPS25YJR102C CTF19Q02732 369 aa2.23□□□□□ -2.05
VPS25YJR102C HOM6P31116 359 aaKnown RBP2.22□□□□□ -2.05
VPS25YJR102C RCN1P36054 211 aa2.22□□□□□ -2.05
VPS25YJR102C TIF34P40217 347 aaKnown RBP2.22□□□□□ -2.05
VPS25YJR102C GLG2P47011 380 aa2.22□□□□□ -2.05
VPS25YJR102C SNZ2P53824 298 aa2.22□□□□□ -2.05
VPS25YJR102C YNL134CP53912 376 aaKnown RBP2.22□□□□□ -2.05
VPS25YJR102C SPG4Q04438 115 aa2.22□□□□□ -2.05
VPS25YJR102C COQ10Q08058 207 aa2.22□□□□□ -2.05
VPS25YJR102C SNU23Q12368 194 aaPredicted RBP2.22□□□□□ -2.05
VPS25YJR102C SCO1P23833 295 aa2.21□□□□□ -2.06
VPS25YJR102C RPT5P33297 434 aaKnown RBP2.21□□□□□ -2.06
VPS25YJR102C MRPL49P40858 161 aaPredicted RBP2.21□□□□□ -2.06
VPS25YJR102C OST2P46964 130 aa2.21□□□□□ -2.06
VPS25YJR102C MRH4P53166 561 aa2.21□□□□□ -2.06
VPS25YJR102C COS6P53344 381 aa2.21□□□□□ -2.06
VPS25YJR102C SYC1Q08553 188 aaPredicted RBP2.21□□□□□ -2.06
VPS25YJR102C MSH5Q12175 901 aa2.21□□□□□ -2.06
VPS25YJR102C SGA1P08019 549 aa2.2□□□□□ -2.06
VPS25YJR102C YBR096WP38256 230 aa2.2□□□□□ -2.06
VPS25YJR102C GOS1P38736 223 aa2.2□□□□□ -2.06
VPS25YJR102C YHB1P39676 399 aaKnown RBP2.2□□□□□ -2.06
VPS25YJR102C RSM10Q03201 203 aa2.2□□□□□ -2.06
VPS25YJR102C CGI121Q03705 181 aaKnown RBP2.2□□□□□ -2.06
VPS25YJR102C YLR173WQ06247 608 aa2.2□□□□□ -2.06
VPS25YJR102C YOR283WQ12040 230 aaKnown RBP2.2□□□□□ -2.06
VPS25YJR102C EMP46Q12396 444 aa2.2□□□□□ -2.06
VPS25YJR102C EHD3P28817 500 aa2.19□□□□□ -2.06
VPS25YJR102C MSA2P36157 363 aa2.19□□□□□ -2.06
VPS25YJR102C COS8P38723 381 aa2.19□□□□□ -2.06
VPS25YJR102C BFR1P38934 470 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
VPS25YJR102C DAN1P47178 298 aa2.19□□□□□ -2.06
VPS25YJR102C MRPL50P53724 139 aa2.19□□□□□ -2.06
VPS25YJR102C YCT1Q12235 531 aa2.19□□□□□ -2.06
VPS25YJR102C MED4Q12343 284 aa2.19□□□□□ -2.06
VPS25YJR102C EMC6Q12431 108 aa2.19□□□□□ -2.06
VPS25YJR102C YHR032W-AP0C5N6 59 aa2.18□□□□□ -2.06
VPS25YJR102C TCP1P12612 559 aaKnown RBP2.18□□□□□ -2.06
VPS25YJR102C YER189WP40104 122 aa2.18□□□□□ -2.06
VPS25YJR102C SNX4P47057 423 aa2.18□□□□□ -2.06
VPS25YJR102C PAM18Q07914 168 aa2.18□□□□□ -2.06
VPS25YJR102C CSM4Q08955 156 aa2.18□□□□□ -2.06
VPS25YJR102C MHT1Q12525 324 aa2.18□□□□□ -2.06
VPS25YJR102C ERG24P32462 438 aaKnown RBP2.17□□□□□ -2.06
VPS25YJR102C SCM4P32564 187 aa2.17□□□□□ -2.06
VPS25YJR102C ARC15P40518 154 aaRIP-Chip data2.17□□□□□ -2.06not detected
VPS25YJR102C JHD2P47156 728 aaPredicted RBP2.17□□□□□ -2.06
VPS25YJR102C RRN5Q02983 363 aa2.17□□□□□ -2.06
VPS25YJR102C YLR462WO13556 202 aa2.16□□□□□ -2.06
VPS25YJR102C YCR102CP25608 368 aa2.16□□□□□ -2.06
VPS25YJR102C YOR062CP36025 268 aa2.16□□□□□ -2.06
VPS25YJR102C GRE3P38715 327 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
VPS25YJR102C YHR127WP38833 243 aaKnown RBP2.16□□□□□ -2.06
VPS25YJR102C YEL075CP39972 122 aa2.16□□□□□ -2.06
VPS25YJR102C THO1P40040 218 aaKnown RBP2.16□□□□□ -2.06
VPS25YJR102C YGL159WP53110 370 aa2.16□□□□□ -2.06
VPS25YJR102C YOR186WQ08560 144 aa2.16□□□□□ -2.06
VPS25YJR102C YHR086W-AQ3E746 53 aa2.16□□□□□ -2.06
VPS25YJR102C IPP1P00817 287 aaKnown RBP2.15□□□□□ -2.07
VPS25YJR102C PUT1P09368 476 aa2.15□□□□□ -2.07
VPS25YJR102C CCA1P21269 546 aa2.15□□□□□ -2.07
VPS25YJR102C NRG2P38082 220 aa2.15□□□□□ -2.07
VPS25YJR102C YHR125WP38831 101 aa2.15□□□□□ -2.07
VPS25YJR102C YJR079WP47126 109 aa2.15□□□□□ -2.07
VPS25YJR102C YLR030WQ07967 263 aa2.15□□□□□ -2.07
VPS25YJR102C ATG31Q12421 196 aa2.15□□□□□ -2.07
VPS25YJR102C YMR144WP40214 342 aaKnown RBP2.14□□□□□ -2.07
VPS25YJR102C YJL027CP47063 138 aaPredicted RBP2.14□□□□□ -2.07
VPS25YJR102C FAR8Q05040 523 aa2.14□□□□□ -2.07
VPS25YJR102C YLR126CQ12288 251 aa2.14□□□□□ -2.07
VPS25YJR102C CFT1Q06632 1357 aaKnown RBP2.13□□□□□ -2.07
VPS25YJR102C Q0255P03881 472 aa2.13□□□□□ -2.07
VPS25YJR102C DOA4P32571 926 aa2.13□□□□□ -2.07
VPS25YJR102C VMA11P32842 164 aa2.13□□□□□ -2.07
VPS25YJR102C HOC1P47124 396 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms