RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W RFU1Q08003 200 aa12.1□□□□□ -0.47
RPN10YHR200W SGA1P08019 549 aa12.09□□□□□ -0.47
RPN10YHR200W QDR1P40475 563 aa12.09□□□□□ -0.47
RPN10YHR200W BUD8P41698 603 aa12.09□□□□□ -0.47
RPN10YHR200W MOB2P43563 287 aa12.09□□□□□ -0.47
RPN10YHR200W TY1A-DR2Q03964 440 aaKnown RBP12.09□□□□□ -0.47
RPN10YHR200W YDR391CQ04170 232 aa12.09□□□□□ -0.47
RPN10YHR200W RDI1Q12434 202 aa12.09□□□□□ -0.47
RPN10YHR200W TDH2P00358 332 aaKnown RBP12.08□□□□□ -0.48
RPN10YHR200W URA3P03962 267 aa12.08□□□□□ -0.48
RPN10YHR200W RNA14P25298 677 aaKnown RBP12.08□□□□□ -0.48
RPN10YHR200W DEG1P31115 442 aaKnown RBP12.08□□□□□ -0.48
RPN10YHR200W TCM62P38228 572 aaKnown RBP12.08□□□□□ -0.48
RPN10YHR200W SKP1P52286 194 aa12.08□□□□□ -0.48
RPN10YHR200W FMP48P53233 369 aa12.08□□□□□ -0.48
RPN10YHR200W RSC58Q07979 502 aa12.08□□□□□ -0.48
RPN10YHR200W RAD52P06778 471 aaKnown RBP12.07□□□□□ -0.48
RPN10YHR200W SAR1P20606 190 aaKnown RBP12.07□□□□□ -0.48
RPN10YHR200W PCL1P24867 279 aa12.07□□□□□ -0.48
RPN10YHR200W YBL010CP32788 280 aa12.07□□□□□ -0.48
RPN10YHR200W MTC6P38849 526 aa12.07□□□□□ -0.48
RPN10YHR200W GPI16P38875 610 aa12.07□□□□□ -0.48
RPN10YHR200W GNA1P43577 159 aaPredicted RBP12.07□□□□□ -0.48
RPN10YHR200W DIE2P50076 525 aa12.07□□□□□ -0.48
RPN10YHR200W NHP6BP11633 99 aaKnown RBP12.06□□□□□ -0.48
RPN10YHR200W MCM1P11746 286 aa12.06□□□□□ -0.48
RPN10YHR200W ATG22P25568 528 aa12.06□□□□□ -0.48
RPN10YHR200W MRPS5P33759 307 aa12.06□□□□□ -0.48
RPN10YHR200W ARC40P38328 384 aaKnown RBP12.06□□□□□ -0.48
RPN10YHR200W YER084WP40057 128 aa12.06□□□□□ -0.48
RPN10YHR200W YIL060WP40519 144 aa12.06□□□□□ -0.48
RPN10YHR200W SIP18P50263 79 aa12.06□□□□□ -0.48
RPN10YHR200W RSM27P53305 110 aa12.06□□□□□ -0.48
RPN10YHR200W BUD25P85052 153 aa12.06□□□□□ -0.48
RPN10YHR200W SPR28Q04921 423 aa12.06□□□□□ -0.48
RPN10YHR200W YOR385WQ08909 290 aa12.06□□□□□ -0.48
RPN10YHR200W FOL3Q12676 427 aaPredicted RBP12.06□□□□□ -0.48
RPN10YHR200W YBR056W-AI2HB52 66 aa12.05□□□□□ -0.48
RPN10YHR200W OTU1P43558 301 aa12.05□□□□□ -0.48
RPN10YHR200W CIN2P46670 268 aa12.05□□□□□ -0.48
RPN10YHR200W NSA1P53136 463 aaPredicted RBP12.05□□□□□ -0.48
RPN10YHR200W LAP3Q01532 483 aaKnown RBP RIP-Chip data12.05□□□□□ -0.48not detected
RPN10YHR200W CRR1Q05790 422 aa12.05□□□□□ -0.48
RPN10YHR200W FIT3Q08907 204 aa12.05□□□□□ -0.48
RPN10YHR200W ENV7Q12003 364 aa12.05□□□□□ -0.48
RPN10YHR200W MET3P08536 511 aa12.04□□□□□ -0.48
RPN10YHR200W RPL3P14126 387 aaKnown RBP12.04□□□□□ -0.48
RPN10YHR200W VMA5P31412 392 aaKnown RBP12.04□□□□□ -0.48
RPN10YHR200W PPQ1P32945 549 aa12.04□□□□□ -0.48
RPN10YHR200W SEN34P39707 275 aa12.04□□□□□ -0.48
RPN10YHR200W ACS1Q01574 713 aa12.04□□□□□ -0.48
RPN10YHR200W TRM13Q12383 476 aa12.04□□□□□ -0.48
RPN10YHR200W ARO4P32449 370 aaKnown RBP12.03□□□□□ -0.48
RPN10YHR200W MCH2P36032 473 aa12.03□□□□□ -0.48
RPN10YHR200W ARO9P38840 513 aaPredicted RBP12.03□□□□□ -0.48
RPN10YHR200W YIL029CP40538 142 aa12.03□□□□□ -0.48
RPN10YHR200W GTF1P53260 183 aaPredicted RBP12.03□□□□□ -0.48
RPN10YHR200W ARG5,6Q01217 863 aa12.03□□□□□ -0.48
RPN10YHR200W GCN1P33892 2672 aaKnown RBP12.03□□□□□ -0.48
RPN10YHR200W BLM10P43583 2143 aa12.02□□□□□ -0.48
RPN10YHR200W YCP4P25349 247 aaKnown RBP12.02□□□□□ -0.49
RPN10YHR200W ACH1P32316 526 aa12.02□□□□□ -0.49
RPN10YHR200W REC114P32841 428 aa12.02□□□□□ -0.49
RPN10YHR200W CLB6P32943 380 aa12.02□□□□□ -0.49
RPN10YHR200W YND1P40009 630 aa12.02□□□□□ -0.49
RPN10YHR200W ATF1P40353 525 aa12.02□□□□□ -0.49
RPN10YHR200W HAS1Q03532 505 aaKnown RBP12.02□□□□□ -0.49
RPN10YHR200W YPR098CQ06089 161 aa12.02□□□□□ -0.49
RPN10YHR200W PRS5Q12265 496 aaKnown RBP12.02□□□□□ -0.49
RPN10YHR200W ERP4Q12450 207 aa12.02□□□□□ -0.49
RPN10YHR200W PRM4Q12498 284 aa12.02□□□□□ -0.49
RPN10YHR200W ARO3P14843 370 aaKnown RBP12.01□□□□□ -0.49
RPN10YHR200W IFM1P25038 676 aa12.01□□□□□ -0.49
RPN10YHR200W ATG15P25641 520 aa12.01□□□□□ -0.49
RPN10YHR200W YKL063CP35725 167 aa12.01□□□□□ -0.49
RPN10YHR200W FLO10P36170 1169 aa12.01□□□□□ -0.49
RPN10YHR200W PIG2P40187 538 aa12.01□□□□□ -0.49
RPN10YHR200W PHB2P50085 310 aa12.01□□□□□ -0.49
RPN10YHR200W RRS1Q08746 203 aaKnown RBP12.01□□□□□ -0.49
RPN10YHR200W CDC28P00546 298 aaKnown RBP12□□□□□ -0.49
RPN10YHR200W MAK32P23060 363 aa12□□□□□ -0.49
RPN10YHR200W YCR101CP25607 182 aa12□□□□□ -0.49
RPN10YHR200W MRPL27P36526 146 aaPredicted RBP12□□□□□ -0.49
RPN10YHR200W MRPL36P36531 177 aa12□□□□□ -0.49
RPN10YHR200W YIP5P53108 310 aa12□□□□□ -0.49
RPN10YHR200W PET20Q99373 253 aa12□□□□□ -0.49
RPN10YHR200W RPS31P05759 152 aaKnown RBP11.99□□□□□ -0.49
RPN10YHR200W DIT1P21623 536 aa11.99□□□□□ -0.49
RPN10YHR200W NAT2P37293 288 aa11.99□□□□□ -0.49
RPN10YHR200W SSN8P47821 323 aa11.99□□□□□ -0.49
RPN10YHR200W MRPL50P53724 139 aa11.99□□□□□ -0.49
RPN10YHR200W YML018CQ03730 393 aa11.99□□□□□ -0.49
RPN10YHR200W VBA1Q04301 562 aa11.99□□□□□ -0.49
RPN10YHR200W CPR4P25334 318 aa11.98□□□□□ -0.49
RPN10YHR200W MRP17P28778 131 aa11.98□□□□□ -0.49
RPN10YHR200W ERG3P32353 365 aa11.98□□□□□ -0.49
RPN10YHR200W MTC7P32633 139 aa11.98□□□□□ -0.49
RPN10YHR200W UTP30P36144 274 aaKnown RBP11.98□□□□□ -0.49
RPN10YHR200W BOL3P39724 118 aa11.98□□□□□ -0.49
RPN10YHR200W FLX1P40464 311 aa11.98□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms