RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C IES6P32617 166 aa11.07□□□□□ -0.64
SHU1YHL006C RIO2P40160 425 aaKnown RBP11.07□□□□□ -0.64
SHU1YHL006C YJR120WP47157 116 aa11.07□□□□□ -0.64
SHU1YHL006C POP6P53218 158 aa11.07□□□□□ -0.64
SHU1YHL006C CAC2Q04199 468 aa11.07□□□□□ -0.64
SHU1YHL006C PIN3Q06449 215 aa11.07□□□□□ -0.64
SHU1YHL006C YDL009CQ12210 107 aa11.07□□□□□ -0.64
SHU1YHL006C BCK2P33306 851 aa11.06□□□□□ -0.64
SHU1YHL006C NVJ1P38881 321 aa11.06□□□□□ -0.64
SHU1YHL006C AVT6P40074 448 aa11.06□□□□□ -0.64
SHU1YHL006C PMT5P52867 743 aa11.06□□□□□ -0.64
SHU1YHL006C TY1A-NL1Q12391 440 aaKnown RBP11.06□□□□□ -0.64
SHU1YHL006C MRPS28P21771 286 aa11.05□□□□□ -0.64
SHU1YHL006C PDS1P40316 373 aaPredicted RBP11.05□□□□□ -0.64
SHU1YHL006C ARG5,6Q01217 863 aa11.05□□□□□ -0.64
SHU1YHL006C MRX10Q05648 414 aa11.05□□□□□ -0.64
SHU1YHL006C PEX30Q06169 523 aa11.05□□□□□ -0.64
SHU1YHL006C MET17P06106 444 aa11.04□□□□□ -0.64
SHU1YHL006C MATALPHA1P0CY06 175 aa11.04□□□□□ -0.64
SHU1YHL006C HMLALPHA1P0CY07 175 aa11.04□□□□□ -0.64
SHU1YHL006C DOA4P32571 926 aa11.04□□□□□ -0.64
SHU1YHL006C RCN1P36054 211 aa11.04□□□□□ -0.64
SHU1YHL006C WSC2P53832 503 aa11.04□□□□□ -0.64
SHU1YHL006C YMR254CQ04838 102 aa11.04□□□□□ -0.64
SHU1YHL006C HUT1Q12520 339 aa11.04□□□□□ -0.64
SHU1YHL006C CDC28P00546 298 aaKnown RBP11.03□□□□□ -0.64
SHU1YHL006C ADK1P07170 222 aaKnown RBP11.03□□□□□ -0.64
SHU1YHL006C PHO4P07270 312 aaKnown RBP11.03□□□□□ -0.64
SHU1YHL006C PRE7P23724 241 aaKnown RBP11.03□□□□□ -0.64
SHU1YHL006C OSH7P38755 437 aa11.03□□□□□ -0.64
SHU1YHL006C PIC2P40035 300 aa11.03□□□□□ -0.64
SHU1YHL006C YPL067CQ02754 198 aa11.03□□□□□ -0.64
SHU1YHL006C ORT1Q12375 292 aa11.03□□□□□ -0.64
SHU1YHL006C MPD1Q12404 318 aaKnown RBP11.03□□□□□ -0.64
SHU1YHL006C YLR099W-AQ3E798 87 aa11.03□□□□□ -0.64
SHU1YHL006C NAT2P37293 288 aa11.02□□□□□ -0.65
SHU1YHL006C BUD8P41698 603 aa11.02□□□□□ -0.65
SHU1YHL006C MAK3Q03503 176 aa11.02□□□□□ -0.65
SHU1YHL006C MRX9Q07349 420 aaKnown RBP11.02□□□□□ -0.65
SHU1YHL006C RBD2Q12270 262 aa11.02□□□□□ -0.65
SHU1YHL006C EAF3Q12432 401 aa11.02□□□□□ -0.65
SHU1YHL006C REP2P03872 296 aa11.01□□□□□ -0.65
SHU1YHL006C SNC2P33328 115 aa11.01□□□□□ -0.65
SHU1YHL006C PIR5P46999 287 aa11.01□□□□□ -0.65
SHU1YHL006C SSN8P47821 323 aa11.01□□□□□ -0.65
SHU1YHL006C GRC3Q07845 632 aa11.01□□□□□ -0.65
SHU1YHL006C RPL25P04456 142 aaKnown RBP11□□□□□ -0.65
SHU1YHL006C AHC2P25649 128 aa11□□□□□ -0.65
SHU1YHL006C IMP1P28627 190 aa11□□□□□ -0.65
SHU1YHL006C ERG24P32462 438 aaKnown RBP11□□□□□ -0.65
SHU1YHL006C PAU2P32612 120 aa11□□□□□ -0.65
SHU1YHL006C SFK1P35735 353 aa11□□□□□ -0.65
SHU1YHL006C YLR283WQ05867 314 aa11□□□□□ -0.65
SHU1YHL006C YEL009C-AA0A023PZF2 135 aa10.99□□□□□ -0.65
SHU1YHL006C SPS4P09937 338 aa10.99□□□□□ -0.65
SHU1YHL006C VMA3P25515 160 aa10.99□□□□□ -0.65
SHU1YHL006C ACH1P32316 526 aa10.99□□□□□ -0.65
SHU1YHL006C LNP1P38878 278 aa10.99□□□□□ -0.65
SHU1YHL006C UFD1P53044 361 aa10.99□□□□□ -0.65
SHU1YHL006C MRH4P53166 561 aa10.99□□□□□ -0.65
SHU1YHL006C CNE1P27825 502 aa10.98□□□□□ -0.65
SHU1YHL006C MTC7P32633 139 aa10.98□□□□□ -0.65
SHU1YHL006C ALG14P38242 237 aa10.98□□□□□ -0.65
SHU1YHL006C XPT1P47165 209 aa10.98□□□□□ -0.65
SHU1YHL006C SCW11P53189 542 aa10.98□□□□□ -0.65
SHU1YHL006C NEJ1Q06148 342 aa10.98□□□□□ -0.65
SHU1YHL006C YLR358CO13565 187 aa10.97□□□□□ -0.65
SHU1YHL006C ARO7P32178 256 aa10.97□□□□□ -0.65
SHU1YHL006C MRPL36P36531 177 aa10.97□□□□□ -0.65
SHU1YHL006C SOL3P38858 249 aa10.97□□□□□ -0.65
SHU1YHL006C YKL102CP34249 101 aa10.96□□□□□ -0.65
SHU1YHL006C UMP1P38293 148 aa10.96□□□□□ -0.65
SHU1YHL006C SCW4P53334 386 aaKnown RBP10.96□□□□□ -0.65
SHU1YHL006C YOR186WQ08560 144 aa10.96□□□□□ -0.65
SHU1YHL006C FUR4P05316 633 aaKnown RBP10.95□□□□□ -0.66
SHU1YHL006C TMA19P35691 167 aaKnown RBP10.95□□□□□ -0.66
SHU1YHL006C GOS1P38736 223 aa10.95□□□□□ -0.66
SHU1YHL006C GVP36P40531 326 aaKnown RBP10.95□□□□□ -0.66
SHU1YHL006C YAE1P47118 141 aaPredicted RBP10.95□□□□□ -0.66
SHU1YHL006C DOC1P53068 250 aa10.95□□□□□ -0.66
SHU1YHL006C TIR4Q12218 487 aaPredicted RBP10.95□□□□□ -0.66
SHU1YHL006C CDC31P06704 161 aaKnown RBP10.94□□□□□ -0.66
SHU1YHL006C ARO4P32449 370 aaKnown RBP10.94□□□□□ -0.66
SHU1YHL006C YKL063CP35725 167 aa10.94□□□□□ -0.66
SHU1YHL006C MID1P41821 548 aa10.94□□□□□ -0.66
SHU1YHL006C MRX5P47007 382 aa10.94□□□□□ -0.66
SHU1YHL006C BUD25P85052 153 aa10.94□□□□□ -0.66
SHU1YHL006C PRP3Q03338 469 aaPredicted RBP10.94□□□□□ -0.66
SHU1YHL006C LIP2Q06005 328 aa10.94□□□□□ -0.66
SHU1YHL006C ATG17Q06410 417 aa10.94□□□□□ -0.66
SHU1YHL006C RFM1Q12192 310 aa10.94□□□□□ -0.66
SHU1YHL006C ATP10P18496 279 aa10.93□□□□□ -0.66
SHU1YHL006C PET18P25362 215 aa10.93□□□□□ -0.66
SHU1YHL006C VMA6P32366 345 aaKnown RBP10.93□□□□□ -0.66
SHU1YHL006C EFM3P47163 339 aa10.93□□□□□ -0.66
SHU1YHL006C YGL114WP53134 725 aa10.93□□□□□ -0.66
SHU1YHL006C IMO32P53219 342 aa10.93□□□□□ -0.66
SHU1YHL006C YPL108WQ02872 168 aaPredicted RBP10.93□□□□□ -0.66
SHU1YHL006C ADH6Q04894 360 aaKnown RBP10.93□□□□□ -0.66
SHU1YHL006C SRL1Q08673 210 aa10.93□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms