RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C TAZ1Q06510 381 aa1.48□□□□□ -2.17
PRE4YFR050C AAD15Q08361 143 aa1.48□□□□□ -2.17
PRE4YFR050C YDL109CQ12103 647 aa1.48□□□□□ -2.17
PRE4YFR050C HMS1Q12398 434 aa1.48□□□□□ -2.17
PRE4YFR050C PCL9Q12477 304 aa1.48□□□□□ -2.17
PRE4YFR050C PSF1Q12488 208 aa1.48□□□□□ -2.17
PRE4YFR050C COS2P0CX12 379 aa1.47□□□□□ -2.17
PRE4YFR050C COS3P0CX13 379 aa1.47□□□□□ -2.17
PRE4YFR050C YCR099CP25657 155 aa1.47□□□□□ -2.17
PRE4YFR050C SUA7P29055 345 aaPredicted RBP1.47□□□□□ -2.17
PRE4YFR050C DEP1P31385 405 aa1.47□□□□□ -2.17
PRE4YFR050C ANR2P36090 516 aaPredicted RBP1.47□□□□□ -2.17
PRE4YFR050C STP2P38704 541 aa1.47□□□□□ -2.17
PRE4YFR050C COS4P43542 379 aa1.47□□□□□ -2.17
PRE4YFR050C TPS1Q00764 495 aaKnown RBP1.47□□□□□ -2.17
PRE4YFR050C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
PRE4YFR050C YPL039WQ03080 316 aa1.47□□□□□ -2.17
PRE4YFR050C YPR172WQ06608 200 aa1.47□□□□□ -2.17
PRE4YFR050C YDL114WQ07530 308 aa1.47□□□□□ -2.17
PRE4YFR050C FIT3Q08907 204 aa1.47□□□□□ -2.17
PRE4YFR050C GRE1Q08969 168 aa1.47□□□□□ -2.17
PRE4YFR050C YOP1Q12402 180 aa1.47□□□□□ -2.17
PRE4YFR050C DCP1Q12517 231 aaPredicted RBP1.47□□□□□ -2.17
PRE4YFR050C OPI3P05375 206 aa1.46□□□□□ -2.18
PRE4YFR050C STE7P06784 515 aa1.46□□□□□ -2.18
PRE4YFR050C GCY1P14065 312 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
PRE4YFR050C CLB6P32943 380 aa1.46□□□□□ -2.18
PRE4YFR050C LTV1P34078 463 aa1.46□□□□□ -2.18
PRE4YFR050C GEP4P38812 185 aa1.46□□□□□ -2.18
PRE4YFR050C TRR2P38816 342 aa1.46□□□□□ -2.18
PRE4YFR050C YFL012WP43580 148 aa1.46□□□□□ -2.18
PRE4YFR050C CCC1P47818 322 aa1.46□□□□□ -2.18
PRE4YFR050C REX2P54964 269 aaKnown RBP1.46□□□□□ -2.18
PRE4YFR050C SPG4Q04438 115 aa1.46□□□□□ -2.18
PRE4YFR050C ASA1Q06822 443 aa1.46□□□□□ -2.18
PRE4YFR050C ADH1P00330 348 aaKnown RBP1.45□□□□□ -2.18
PRE4YFR050C CKI1P20485 582 aa1.45□□□□□ -2.18
PRE4YFR050C FUN26P31381 517 aa1.45□□□□□ -2.18
PRE4YFR050C ZRT3P34240 503 aa1.45□□□□□ -2.18
PRE4YFR050C GPX2P38143 162 aa1.45□□□□□ -2.18
PRE4YFR050C QDR3P38227 689 aa1.45□□□□□ -2.18
PRE4YFR050C BMT2P38278 337 aa1.45□□□□□ -2.18
PRE4YFR050C PEX22P39718 180 aa1.45□□□□□ -2.18
PRE4YFR050C PRM10P42946 383 aa1.45□□□□□ -2.18
PRE4YFR050C MDM34P53083 459 aa1.45□□□□□ -2.18
PRE4YFR050C GEP7P53171 287 aa1.45□□□□□ -2.18
PRE4YFR050C YGR018CP53211 109 aa1.45□□□□□ -2.18
PRE4YFR050C RDL2Q08742 149 aaKnown RBP1.45□□□□□ -2.18
PRE4YFR050C YDL199CQ12407 687 aa1.45□□□□□ -2.18
PRE4YFR050C RPL12AP0CX53 165 aaKnown RBP1.44□□□□□ -2.18
PRE4YFR050C RPL12BP0CX54 165 aa1.44□□□□□ -2.18
PRE4YFR050C TRX3P25372 127 aa1.44□□□□□ -2.18
PRE4YFR050C EHD3P28817 500 aa1.44□□□□□ -2.18
PRE4YFR050C SPO23P33757 523 aa1.44□□□□□ -2.18
PRE4YFR050C TIR2P33890 251 aa1.44□□□□□ -2.18
PRE4YFR050C VPS51P36116 164 aa1.44□□□□□ -2.18
PRE4YFR050C FMP23P38231 175 aa1.44□□□□□ -2.18
PRE4YFR050C LSM12P38828 187 aaKnown RBP1.44□□□□□ -2.18
PRE4YFR050C NCE101Q02820 53 aa1.44□□□□□ -2.18
PRE4YFR050C YDR222WQ04925 415 aa1.44□□□□□ -2.18
PRE4YFR050C UAF30Q08747 228 aa1.44□□□□□ -2.18
PRE4YFR050C RPS18AP0CX55 146 aaKnown RBP1.43□□□□□ -2.18
PRE4YFR050C RPS18BP0CX56 146 aaPredicted RBP1.43□□□□□ -2.18
PRE4YFR050C SCO1P23833 295 aa1.43□□□□□ -2.18
PRE4YFR050C GIT1P25346 518 aa1.43□□□□□ -2.18
PRE4YFR050C ZUO1P32527 433 aaKnown RBP1.43□□□□□ -2.18
PRE4YFR050C UTR5P32630 166 aa1.43□□□□□ -2.18
PRE4YFR050C COS9P36034 407 aa1.43□□□□□ -2.18
PRE4YFR050C MRPL27P36526 146 aaPredicted RBP1.43□□□□□ -2.18
PRE4YFR050C SSH1P38353 490 aaKnown RBP1.43□□□□□ -2.18
PRE4YFR050C TOS2P50078 622 aa1.43□□□□□ -2.18
PRE4YFR050C NSA1P53136 463 aaPredicted RBP1.43□□□□□ -2.18
PRE4YFR050C ASI3P53983 676 aa1.43□□□□□ -2.18
PRE4YFR050C YDR274CP87283 123 aa1.43□□□□□ -2.18
PRE4YFR050C RPL21AQ02753 160 aaKnown RBP1.43□□□□□ -2.18
PRE4YFR050C URC2Q04411 772 aa1.43□□□□□ -2.18
PRE4YFR050C YDR115WQ04598 105 aa1.43□□□□□ -2.18
PRE4YFR050C LDS2Q08218 356 aa1.43□□□□□ -2.18
PRE4YFR050C PRM7Q12459 698 aa1.43□□□□□ -2.18
PRE4YFR050C RPL21BQ12672 160 aaKnown RBP1.43□□□□□ -2.18
PRE4YFR050C YOL162WP0CF19 215 aa1.42□□□□□ -2.18
PRE4YFR050C RPL16AP26784 199 aaKnown RBP1.42□□□□□ -2.18
PRE4YFR050C MAK5P38112 773 aaPredicted RBP1.42□□□□□ -2.18
PRE4YFR050C YBR241CP38142 488 aa1.42□□□□□ -2.18
PRE4YFR050C YJL055WP47044 245 aa1.42□□□□□ -2.18
PRE4YFR050C UFD1P53044 361 aa1.42□□□□□ -2.18
PRE4YFR050C RRN9P53437 365 aa1.42□□□□□ -2.18
PRE4YFR050C COX20Q04935 205 aa1.42□□□□□ -2.18
PRE4YFR050C YHC1Q05900 231 aaKnown RBP1.42□□□□□ -2.18
PRE4YFR050C LDS1P31379 325 aa1.41□□□□□ -2.18
PRE4YFR050C YPS1P32329 569 aa1.41□□□□□ -2.18
PRE4YFR050C VMA8P32610 256 aaKnown RBP1.41□□□□□ -2.18
PRE4YFR050C ECT1P33412 323 aa1.41□□□□□ -2.18
PRE4YFR050C NSG1P38837 291 aa1.41□□□□□ -2.18
PRE4YFR050C PEX18P38855 283 aa1.41□□□□□ -2.18
PRE4YFR050C VHT1P53241 593 aa1.41□□□□□ -2.18
PRE4YFR050C RNH201P53942 307 aa1.41□□□□□ -2.18
PRE4YFR050C MEH1Q02205 184 aa1.41□□□□□ -2.18
PRE4YFR050C PET117Q02771 107 aa1.41□□□□□ -2.18
PRE4YFR050C FSH2Q05015 223 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 122.4 ms