RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C CDC23P16522 626 aa6.8□□□□□ -1.32
PUP3YER094C PPZ2P33329 710 aa6.8□□□□□ -1.32
PUP3YER094C MRPL3P36516 390 aa6.8□□□□□ -1.32
PUP3YER094C SOL3P38858 249 aa6.8□□□□□ -1.32
PUP3YER094C GPI16P38875 610 aa6.8□□□□□ -1.32
PUP3YER094C DIE2P50076 525 aa6.8□□□□□ -1.32
PUP3YER094C TY1A-DR2Q03964 440 aaKnown RBP6.8□□□□□ -1.32
PUP3YER094C CRR1Q05790 422 aa6.8□□□□□ -1.32
PUP3YER094C FIT3Q08907 204 aa6.8□□□□□ -1.32
PUP3YER094C USB1Q12208 290 aaKnown RBP6.8□□□□□ -1.32
PUP3YER094C ERP4Q12450 207 aa6.8□□□□□ -1.32
PUP3YER094C RAD52P06778 471 aaKnown RBP6.79□□□□□ -1.32
PUP3YER094C ARO3P14843 370 aaKnown RBP6.79□□□□□ -1.32
PUP3YER094C URA6P15700 204 aa6.79□□□□□ -1.32
PUP3YER094C MAK32P23060 363 aa6.79□□□□□ -1.32
PUP3YER094C RNA14P25298 677 aaKnown RBP6.79□□□□□ -1.32
PUP3YER094C ATG15P25641 520 aa6.79□□□□□ -1.32
PUP3YER094C MSS1P32559 526 aaPredicted RBP6.79□□□□□ -1.32
PUP3YER094C YND1P40009 630 aa6.79□□□□□ -1.32
PUP3YER094C QDR1P40475 563 aa6.79□□□□□ -1.32
PUP3YER094C YIL060WP40519 144 aa6.79□□□□□ -1.32
PUP3YER094C OTU1P43558 301 aa6.79□□□□□ -1.32
PUP3YER094C SIP18P50263 79 aa6.79□□□□□ -1.32
PUP3YER094C RDI1Q12434 202 aa6.79□□□□□ -1.32
PUP3YER094C TDH2P00358 332 aaKnown RBP6.78□□□□□ -1.32
PUP3YER094C YCP4P25349 247 aaKnown RBP6.78□□□□□ -1.32
PUP3YER094C ATG22P25568 528 aa6.78□□□□□ -1.32
PUP3YER094C DEG1P31115 442 aaKnown RBP6.78□□□□□ -1.32
PUP3YER094C ARO4P32449 370 aaKnown RBP6.78□□□□□ -1.32
PUP3YER094C TCM62P38228 572 aaKnown RBP6.78□□□□□ -1.32
PUP3YER094C SEN34P39707 275 aa6.78□□□□□ -1.32
PUP3YER094C FLX1P40464 311 aa6.78□□□□□ -1.32
PUP3YER094C PHB2P50085 310 aa6.78□□□□□ -1.32
PUP3YER094C HHT1P61830 136 aa6.78□□□□□ -1.32
PUP3YER094C ARG5,6Q01217 863 aa6.78□□□□□ -1.32
PUP3YER094C MRX9Q07349 420 aaKnown RBP6.78□□□□□ -1.32
PUP3YER094C RFU1Q08003 200 aa6.78□□□□□ -1.32
PUP3YER094C ENV7Q12003 364 aa6.78□□□□□ -1.32
PUP3YER094C YLR125WQ12138 136 aa6.78□□□□□ -1.32
PUP3YER094C RNH203Q12338 110 aa6.78□□□□□ -1.32
PUP3YER094C FSH3Q99369 266 aa6.78□□□□□ -1.32
PUP3YER094C CUP1-1P0CX80 61 aa6.77□□□□□ -1.33
PUP3YER094C CUP1-2P0CX81 61 aa6.77□□□□□ -1.33
PUP3YER094C RPL3P14126 387 aaKnown RBP6.77□□□□□ -1.33
PUP3YER094C GRX2P17695 143 aaKnown RBP6.77□□□□□ -1.33
PUP3YER094C SAR1P20606 190 aaKnown RBP6.77□□□□□ -1.33
PUP3YER094C RFA3P26755 122 aaKnown RBP6.77□□□□□ -1.33
PUP3YER094C VMA5P31412 392 aaKnown RBP6.77□□□□□ -1.33
PUP3YER094C ACH1P32316 526 aa6.77□□□□□ -1.33
PUP3YER094C CLB6P32943 380 aa6.77□□□□□ -1.33
PUP3YER094C MCH2P36032 473 aa6.77□□□□□ -1.33
PUP3YER094C ARC40P38328 384 aaKnown RBP6.77□□□□□ -1.33
PUP3YER094C BOL3P39724 118 aa6.77□□□□□ -1.33
PUP3YER094C PIG2P40187 538 aa6.77□□□□□ -1.33
PUP3YER094C GNA1P43577 159 aaPredicted RBP6.77□□□□□ -1.33
PUP3YER094C NSA1P53136 463 aaPredicted RBP6.77□□□□□ -1.33
PUP3YER094C RSM27P53305 110 aa6.77□□□□□ -1.33
PUP3YER094C MRPS16Q02608 121 aa6.77□□□□□ -1.33
PUP3YER094C YPR196WQ06595 470 aa6.77□□□□□ -1.33
PUP3YER094C RSC58Q07979 502 aa6.77□□□□□ -1.33
PUP3YER094C HUT1Q12520 339 aa6.77□□□□□ -1.33
PUP3YER094C YKL063CP35725 167 aa6.76□□□□□ -1.33
PUP3YER094C ARO9P38840 513 aaPredicted RBP6.76□□□□□ -1.33
PUP3YER094C UBC13P52490 153 aa6.76□□□□□ -1.33
PUP3YER094C GPG1P53130 126 aa6.76□□□□□ -1.33
PUP3YER094C ACS1Q01574 713 aa6.76□□□□□ -1.33
PUP3YER094C YPL077CQ02831 240 aa6.76□□□□□ -1.33
PUP3YER094C HAS1Q03532 505 aaKnown RBP6.76□□□□□ -1.33
PUP3YER094C YDR391CQ04170 232 aa6.76□□□□□ -1.33
PUP3YER094C MEC1P38111 2368 aa6.75□□□□□ -1.33
PUP3YER094C MET3P08536 511 aa6.75□□□□□ -1.33
PUP3YER094C GLC7P32598 312 aaKnown RBP6.75□□□□□ -1.33
PUP3YER094C REC114P32841 428 aa6.75□□□□□ -1.33
PUP3YER094C PPQ1P32945 549 aa6.75□□□□□ -1.33
PUP3YER094C SRL3P36167 246 aa6.75□□□□□ -1.33
PUP3YER094C SKP1P52286 194 aa6.75□□□□□ -1.33
PUP3YER094C UFD1P53044 361 aa6.75□□□□□ -1.33
PUP3YER094C NGL2Q03264 515 aaKnown RBP6.75□□□□□ -1.33
PUP3YER094C VBA1Q04301 562 aa6.75□□□□□ -1.33
PUP3YER094C SPR28Q04921 423 aa6.75□□□□□ -1.33
PUP3YER094C YPR098CQ06089 161 aa6.75□□□□□ -1.33
PUP3YER094C NCE102Q12207 173 aaRIP-Chip data6.75□□□□□ -1.33not detected
PUP3YER094C CDC28P00546 298 aaKnown RBP6.74□□□□□ -1.33
PUP3YER094C REP2P03872 296 aa6.74□□□□□ -1.33
PUP3YER094C RPL6BP05739 176 aaKnown RBP6.74□□□□□ -1.33
PUP3YER094C SPS4P09937 338 aa6.74□□□□□ -1.33
PUP3YER094C NHP6BP11633 99 aaKnown RBP6.74□□□□□ -1.33
PUP3YER094C MSI1P13712 422 aa6.74□□□□□ -1.33
PUP3YER094C SAG1P20840 650 aa6.74□□□□□ -1.33
PUP3YER094C ERG3P32353 365 aa6.74□□□□□ -1.33
PUP3YER094C VAM7P32912 316 aa6.74□□□□□ -1.33
PUP3YER094C PAN3P36102 679 aaPredicted RBP6.74□□□□□ -1.33
PUP3YER094C MRPL36P36531 177 aa6.74□□□□□ -1.33
PUP3YER094C NAT2P37293 288 aa6.74□□□□□ -1.33
PUP3YER094C YCK3P39962 524 aa6.74□□□□□ -1.33
PUP3YER094C YIL029CP40538 142 aa6.74□□□□□ -1.33
PUP3YER094C OST1P41543 476 aaKnown RBP6.74□□□□□ -1.33
PUP3YER094C MID1P41821 548 aa6.74□□□□□ -1.33
PUP3YER094C YFL051CP43552 160 aa6.74□□□□□ -1.33
PUP3YER094C LSM1P47017 172 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 70 ms