RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C EMI1Q04406 187 aa2.05□□□□□ -2.08
VAB2YEL005C SUE1Q06524 206 aa2.05□□□□□ -2.08
VAB2YEL005C RDS3Q06835 107 aaPredicted RBP2.05□□□□□ -2.08
VAB2YEL005C PAM18Q07914 168 aa2.05□□□□□ -2.08
VAB2YEL005C CSM4Q08955 156 aa2.05□□□□□ -2.08
VAB2YEL005C YOR029WQ12243 111 aa2.05□□□□□ -2.08
VAB2YEL005C SEC22P22214 214 aa2.04□□□□□ -2.08
VAB2YEL005C GDH2P33327 1092 aaKnown RBP2.04□□□□□ -2.08
VAB2YEL005C ECM13P38195 257 aa2.04□□□□□ -2.08
VAB2YEL005C MED6P38782 295 aa2.04□□□□□ -2.08
VAB2YEL005C SNZ3P43545 298 aa2.04□□□□□ -2.08
VAB2YEL005C LIA1P47120 325 aaKnown RBP2.04□□□□□ -2.08
VAB2YEL005C PET117Q02771 107 aa2.04□□□□□ -2.08
VAB2YEL005C SPG4Q04438 115 aa2.04□□□□□ -2.08
VAB2YEL005C SYC1Q08553 188 aaPredicted RBP2.04□□□□□ -2.08
VAB2YEL005C MSH5Q12175 901 aa2.04□□□□□ -2.08
VAB2YEL005C PPH21P23594 369 aa2.03□□□□□ -2.08
VAB2YEL005C FMC1P40491 155 aa2.03□□□□□ -2.08
VAB2YEL005C YJL016WP47072 561 aa2.03□□□□□ -2.08
VAB2YEL005C SRL4Q03085 281 aa2.03□□□□□ -2.08
VAB2YEL005C YLR179CQ06252 201 aaKnown RBP2.03□□□□□ -2.08
VAB2YEL005C YCT1Q12235 531 aa2.03□□□□□ -2.08
VAB2YEL005C BBP1Q12365 385 aa2.03□□□□□ -2.08
VAB2YEL005C SAS5Q99314 248 aa2.03□□□□□ -2.08
VAB2YEL005C RPL26AP05743 127 aaKnown RBP2.02□□□□□ -2.09
VAB2YEL005C RPT5P33297 434 aaKnown RBP2.02□□□□□ -2.09
VAB2YEL005C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
VAB2YEL005C YHL026CP38740 315 aa2.02□□□□□ -2.09
VAB2YEL005C BFR1P38934 470 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
VAB2YEL005C MRH4P53166 561 aa2.02□□□□□ -2.09
VAB2YEL005C RPL26BP53221 127 aaKnown RBP2.02□□□□□ -2.09
VAB2YEL005C SNZ2P53824 298 aa2.02□□□□□ -2.09
VAB2YEL005C IGO1P53897 168 aa2.02□□□□□ -2.09
VAB2YEL005C KRE28Q04431 385 aa2.02□□□□□ -2.09
VAB2YEL005C YOR268CQ08734 132 aa2.02□□□□□ -2.09
VAB2YEL005C NOT5Q12514 560 aaPredicted RBP2.02□□□□□ -2.09
VAB2YEL005C FKS1P38631 1876 aaKnown RBP2.02□□□□□ -2.09
VAB2YEL005C SWI1P09547 1314 aa2.01□□□□□ -2.09
VAB2YEL005C DPM1P14020 267 aaKnown RBP2.01□□□□□ -2.09
VAB2YEL005C SNF6P18888 332 aa2.01□□□□□ -2.09
VAB2YEL005C YCR016WP25617 290 aaKnown RBP2.01□□□□□ -2.09
VAB2YEL005C CLB6P32943 380 aa2.01□□□□□ -2.09
VAB2YEL005C MSN4P33749 630 aa2.01□□□□□ -2.09
VAB2YEL005C RCN1P36054 211 aa2.01□□□□□ -2.09
VAB2YEL005C GOS1P38736 223 aa2.01□□□□□ -2.09
VAB2YEL005C YHR127WP38833 243 aaKnown RBP2.01□□□□□ -2.09
VAB2YEL005C COG3P40094 801 aa2.01□□□□□ -2.09
VAB2YEL005C YMR144WP40214 342 aaKnown RBP2.01□□□□□ -2.09
VAB2YEL005C TIF34P40217 347 aaKnown RBP2.01□□□□□ -2.09
VAB2YEL005C GLG2P47011 380 aa2.01□□□□□ -2.09
VAB2YEL005C SLM2P53955 656 aa2.01□□□□□ -2.09
VAB2YEL005C PEX12Q04370 399 aa2.01□□□□□ -2.09
VAB2YEL005C COQ10Q08058 207 aa2.01□□□□□ -2.09
VAB2YEL005C COS8P38723 381 aa2□□□□□ -2.09
VAB2YEL005C YER189WP40104 122 aa2□□□□□ -2.09
VAB2YEL005C OST2P46964 130 aa2□□□□□ -2.09
VAB2YEL005C NUP84P52891 726 aa2□□□□□ -2.09
VAB2YEL005C ATG31Q12421 196 aa2□□□□□ -2.09
VAB2YEL005C CFT1Q06632 1357 aaKnown RBP1.99□□□□□ -2.09
VAB2YEL005C IPP1P00817 287 aaKnown RBP1.99□□□□□ -2.09
VAB2YEL005C ADH3P07246 375 aaKnown RBP1.99□□□□□ -2.09
VAB2YEL005C TCP1P12612 559 aaKnown RBP1.99□□□□□ -2.09
VAB2YEL005C CUE1P38428 203 aa1.99□□□□□ -2.09
VAB2YEL005C THO1P40040 218 aaKnown RBP1.99□□□□□ -2.09
VAB2YEL005C ARC15P40518 154 aaRIP-Chip data1.99□□□□□ -2.09not detected
VAB2YEL005C MNN5P46982 586 aa1.99□□□□□ -2.09
VAB2YEL005C YJR079WP47126 109 aa1.99□□□□□ -2.09
VAB2YEL005C CTF19Q02732 369 aa1.99□□□□□ -2.09
VAB2YEL005C YLR283WQ05867 314 aa1.99□□□□□ -2.09
VAB2YEL005C MHT1Q12525 324 aa1.99□□□□□ -2.09
VAB2YEL005C YLR462WO13556 202 aa1.98□□□□□ -2.09
VAB2YEL005C MRPL25P23369 157 aa1.98□□□□□ -2.09
VAB2YEL005C YEL075CP39972 122 aa1.98□□□□□ -2.09
VAB2YEL005C MRPL49P40858 161 aaPredicted RBP1.98□□□□□ -2.09
VAB2YEL005C ILM1P47155 203 aa1.98□□□□□ -2.09
VAB2YEL005C JHD2P47156 728 aaPredicted RBP1.98□□□□□ -2.09
VAB2YEL005C RMR1P53060 241 aa1.98□□□□□ -2.09
VAB2YEL005C FAR8Q05040 523 aa1.98□□□□□ -2.09
VAB2YEL005C VPS68Q12016 184 aa1.98□□□□□ -2.09
VAB2YEL005C EMP46Q12396 444 aa1.98□□□□□ -2.09
VAB2YEL005C SGA1P08019 549 aa1.97□□□□□ -2.09
VAB2YEL005C PUT1P09368 476 aa1.97□□□□□ -2.09
VAB2YEL005C SCO1P23833 295 aa1.97□□□□□ -2.09
VAB2YEL005C ERG24P32462 438 aaKnown RBP1.97□□□□□ -2.09
VAB2YEL005C LDB7P38210 180 aa1.97□□□□□ -2.09
VAB2YEL005C HOC1P47124 396 aa1.97□□□□□ -2.09
VAB2YEL005C YJR146WP47174 117 aa1.97□□□□□ -2.09
VAB2YEL005C YGR026WP53217 278 aa1.97□□□□□ -2.09
VAB2YEL005C PRM15Q03262 622 aa1.97□□□□□ -2.09
VAB2YEL005C YOR186WQ08560 144 aa1.97□□□□□ -2.09
VAB2YEL005C YPL257WQ08974 193 aa1.97□□□□□ -2.09
VAB2YEL005C YOR283WQ12040 230 aaKnown RBP1.97□□□□□ -2.09
VAB2YEL005C YLR126CQ12288 251 aa1.97□□□□□ -2.09
VAB2YEL005C CCA1P21269 546 aa1.96□□□□□ -2.1
VAB2YEL005C SCM4P32564 187 aa1.96□□□□□ -2.1
VAB2YEL005C VMA11P32842 164 aa1.96□□□□□ -2.1
VAB2YEL005C MSA2P36157 363 aa1.96□□□□□ -2.1
VAB2YEL005C YBR096WP38256 230 aa1.96□□□□□ -2.1
VAB2YEL005C COX15P40086 486 aa1.96□□□□□ -2.1
VAB2YEL005C FIS1P40515 155 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms