RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A BBP1Q12365 385 aa-0.15□□□□□ -2.43
SDH6YDR379C-A YOS9Q99220 542 aa-0.15□□□□□ -2.43
SDH6YDR379C-A MSW1P04803 379 aa-0.16□□□□□ -2.44
SDH6YDR379C-A GRX2P17695 143 aaKnown RBP-0.16□□□□□ -2.44
SDH6YDR379C-A RPL5P26321 297 aaKnown RBP-0.16□□□□□ -2.44
SDH6YDR379C-A VMA11P32842 164 aa-0.16□□□□□ -2.44
SDH6YDR379C-A TVP38P36164 337 aa-0.16□□□□□ -2.44
SDH6YDR379C-A SWC5P38326 303 aa-0.16□□□□□ -2.44
SDH6YDR379C-A YGL185CP53100 379 aa-0.16□□□□□ -2.44
SDH6YDR379C-A CUE3P53137 624 aaKnown RBP-0.16□□□□□ -2.44
SDH6YDR379C-A SPP2Q02521 185 aa-0.16□□□□□ -2.44
SDH6YDR379C-A SIA1Q12212 622 aa-0.16□□□□□ -2.44
SDH6YDR379C-A PSY3Q12318 242 aa-0.16□□□□□ -2.44
SDH6YDR379C-A PAA1Q12447 191 aaKnown RBP-0.16□□□□□ -2.44
SDH6YDR379C-A MRPL23Q12487 163 aaPredicted RBP-0.16□□□□□ -2.44
SDH6YDR379C-A YNL146C-AQ3E7Z1 64 aa-0.16□□□□□ -2.44
SDH6YDR379C-A SIR4P11978 1358 aa-0.17□□□□□ -2.44
SDH6YDR379C-A YLR462WO13556 202 aa-0.17□□□□□ -2.44
SDH6YDR379C-A FZF1P32805 299 aa-0.17□□□□□ -2.44
SDH6YDR379C-A YHL049CP38722 271 aa-0.17□□□□□ -2.44
SDH6YDR379C-A APE4P38821 490 aa-0.17□□□□□ -2.44
SDH6YDR379C-A TDA11P38854 504 aa-0.17□□□□□ -2.44
SDH6YDR379C-A YEL075CP39972 122 aa-0.17□□□□□ -2.44
SDH6YDR379C-A JEM1P40358 645 aa-0.17□□□□□ -2.44
SDH6YDR379C-A TIR3P40552 269 aa-0.17□□□□□ -2.44
SDH6YDR379C-A CDC40P40968 455 aaPredicted RBP-0.17□□□□□ -2.44
SDH6YDR379C-A NBP35P52920 328 aa-0.17□□□□□ -2.44
SDH6YDR379C-A FAR8Q05040 523 aa-0.17□□□□□ -2.44
SDH6YDR379C-A ANT1Q06497 328 aa-0.17□□□□□ -2.44
SDH6YDR379C-A GPN3Q06543 272 aa-0.17□□□□□ -2.44
SDH6YDR379C-A YLR030WQ07967 263 aa-0.17□□□□□ -2.44
SDH6YDR379C-A MSA1Q08471 629 aa-0.17□□□□□ -2.44
SDH6YDR379C-A RRS1Q08746 203 aaKnown RBP-0.17□□□□□ -2.44
SDH6YDR379C-A POM33Q12164 279 aa-0.17□□□□□ -2.44
SDH6YDR379C-A YPR011CQ12251 326 aa-0.17□□□□□ -2.44
SDH6YDR379C-A FRE6Q12473 712 aa-0.17□□□□□ -2.44
SDH6YDR379C-A YBL008W-AQ3E821 79 aa-0.17□□□□□ -2.44
SDH6YDR379C-A ILV1P00927 576 aaKnown RBP-0.18□□□□□ -2.44
SDH6YDR379C-A ICL1P28240 557 aaPredicted RBP-0.18□□□□□ -2.44
SDH6YDR379C-A HEK2P38199 381 aaKnown RBP RIP-Chip data-0.18□□□□□ -2.44not detected
SDH6YDR379C-A YER189WP40104 122 aa-0.18□□□□□ -2.44
SDH6YDR379C-A RPL33BP41056 107 aaKnown RBP-0.18□□□□□ -2.44
SDH6YDR379C-A AGP3P43548 558 aa-0.18□□□□□ -2.44
SDH6YDR379C-A LOH1P47055 219 aa-0.18□□□□□ -2.44
SDH6YDR379C-A BOL2P53082 120 aa-0.18□□□□□ -2.44
SDH6YDR379C-A TIM21P53220 239 aa-0.18□□□□□ -2.44
SDH6YDR379C-A PDR16P53860 351 aaKnown RBP-0.18□□□□□ -2.44
SDH6YDR379C-A SWS2P53937 143 aa-0.18□□□□□ -2.44
SDH6YDR379C-A SFH1Q06168 426 aa-0.18□□□□□ -2.44
SDH6YDR379C-A HEM25Q07534 307 aa-0.18□□□□□ -2.44
SDH6YDR379C-A TPO4Q12256 659 aa-0.18□□□□□ -2.44
SDH6YDR379C-A YDL180WQ12301 547 aa-0.18□□□□□ -2.44
SDH6YDR379C-A CDC37P06101 506 aaKnown RBP-0.19□□□□□ -2.44
SDH6YDR379C-A CAR2P07991 424 aaKnown RBP-0.19□□□□□ -2.44
SDH6YDR379C-A YHR212W-AP0CX91 67 aa-0.19□□□□□ -2.44
SDH6YDR379C-A UGX2P32772 223 aa-0.19□□□□□ -2.44
SDH6YDR379C-A SWE1P32944 819 aa-0.19□□□□□ -2.44
SDH6YDR379C-A LAS1P36146 502 aaPredicted RBP-0.19□□□□□ -2.44
SDH6YDR379C-A GAA1P39012 614 aa-0.19□□□□□ -2.44
SDH6YDR379C-A MNN9P39107 395 aaKnown RBP-0.19□□□□□ -2.44
SDH6YDR379C-A AIM20P40451 204 aa-0.19□□□□□ -2.44
SDH6YDR379C-A YFL065CP43539 102 aa-0.19□□□□□ -2.44
SDH6YDR379C-A CUS2P53830 285 aaPredicted RBP-0.19□□□□□ -2.44
SDH6YDR379C-A YMR111CQ04461 462 aaPredicted RBP-0.19□□□□□ -2.44
SDH6YDR379C-A BER1Q06688 274 aaKnown RBP-0.19□□□□□ -2.44
SDH6YDR379C-A PML1Q07930 204 aaPredicted RBP-0.19□□□□□ -2.44
SDH6YDR379C-A YHR139C-AO13536 103 aa-0.2□□□□□ -2.44
SDH6YDR379C-A RPP0P05317 312 aaKnown RBP-0.2□□□□□ -2.44
SDH6YDR379C-A SSA3P09435 649 aaKnown RBP-0.2□□□□□ -2.44
SDH6YDR379C-A SNA3P14359 133 aa-0.2□□□□□ -2.44
SDH6YDR379C-A POT1P27796 417 aaKnown RBP RIP-Chip data-0.2□□□□□ -2.44not detected
SDH6YDR379C-A MEI4P29467 408 aa-0.2□□□□□ -2.44
SDH6YDR379C-A ERG24P32462 438 aaKnown RBP-0.2□□□□□ -2.44
SDH6YDR379C-A SRY1P36007 326 aa-0.2□□□□□ -2.44
SDH6YDR379C-A MSA2P36157 363 aa-0.2□□□□□ -2.44
SDH6YDR379C-A FZO1P38297 855 aa-0.2□□□□□ -2.44
SDH6YDR379C-A RRF1P38771 230 aa-0.2□□□□□ -2.44
SDH6YDR379C-A YNL217WP40152 326 aa-0.2□□□□□ -2.44
SDH6YDR379C-A FIS1P40515 155 aa-0.2□□□□□ -2.44
SDH6YDR379C-A YAE1P47118 141 aaPredicted RBP-0.2□□□□□ -2.44
SDH6YDR379C-A YGL034CP53186 121 aa-0.2□□□□□ -2.44
SDH6YDR379C-A GTR2P53290 341 aa-0.2□□□□□ -2.44
SDH6YDR379C-A CPD1P53314 239 aa-0.2□□□□□ -2.44
SDH6YDR379C-A SED1Q01589 338 aa-0.2□□□□□ -2.44
SDH6YDR379C-A YLR179CQ06252 201 aaKnown RBP-0.2□□□□□ -2.44
SDH6YDR379C-A STH1P32597 1359 aa-0.2□□□□□ -2.44
SDH6YDR379C-A RPL27BP0C2H7 136 aaKnown RBP-0.21□□□□□ -2.44
SDH6YDR379C-A PET18P25362 215 aa-0.21□□□□□ -2.44
SDH6YDR379C-A SMI1P32566 505 aa-0.21□□□□□ -2.44
SDH6YDR379C-A YHL042WP38729 150 aa-0.21□□□□□ -2.44
SDH6YDR379C-A VPS45P38932 577 aa-0.21□□□□□ -2.44
SDH6YDR379C-A END3P39013 349 aa-0.21□□□□□ -2.44
SDH6YDR379C-A EDC3P39998 551 aaKnown RBP-0.21□□□□□ -2.44
SDH6YDR379C-A YEA4P40004 342 aa-0.21□□□□□ -2.44
SDH6YDR379C-A FLX1P40464 311 aa-0.21□□□□□ -2.44
SDH6YDR379C-A GPI8P49018 411 aa-0.21□□□□□ -2.44
SDH6YDR379C-A RIB4P50861 169 aaPredicted RBP-0.21□□□□□ -2.44
SDH6YDR379C-A AIF1P52923 378 aa-0.21□□□□□ -2.44
SDH6YDR379C-A RMR1P53060 241 aa-0.21□□□□□ -2.44
SDH6YDR379C-A YGL159WP53110 370 aa-0.21□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 141.1 ms