RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C NAS2P40555 220 aa0.3□□□□□ -2.36
SSS1YDR086C RIB4P50861 169 aaPredicted RBP0.3□□□□□ -2.36
SSS1YDR086C RPL9BP51401 191 aaKnown RBP0.3□□□□□ -2.36
SSS1YDR086C PEX31P53203 462 aa0.3□□□□□ -2.36
SSS1YDR086C NEJ1Q06148 342 aa0.3□□□□□ -2.36
SSS1YDR086C SFH1Q06168 426 aa0.3□□□□□ -2.36
SSS1YDR086C PER33Q12144 273 aa0.3□□□□□ -2.36
SSS1YDR086C COX5AP00424 153 aa0.29□□□□□ -2.36
SSS1YDR086C UGA1P17649 471 aa0.29□□□□□ -2.36
SSS1YDR086C SEC22P22214 214 aa0.29□□□□□ -2.36
SSS1YDR086C SMI1P32566 505 aa0.29□□□□□ -2.36
SSS1YDR086C SSH1P38353 490 aaKnown RBP0.29□□□□□ -2.36
SSS1YDR086C ICE2P40499 491 aa0.29□□□□□ -2.36
SSS1YDR086C NBP35P52920 328 aa0.29□□□□□ -2.36
SSS1YDR086C CPD1P53314 239 aa0.29□□□□□ -2.36
SSS1YDR086C MPA43P53583 542 aaPredicted RBP0.29□□□□□ -2.36
SSS1YDR086C SWS2P53937 143 aa0.29□□□□□ -2.36
SSS1YDR086C UBC7Q02159 165 aa0.29□□□□□ -2.36
SSS1YDR086C MGR3Q04472 501 aa0.29□□□□□ -2.36
SSS1YDR086C BBP1Q12365 385 aa0.29□□□□□ -2.36
SSS1YDR086C FLO9P39712 1322 aa0.29□□□□□ -2.36
SSS1YDR086C SLH1P53327 1967 aaKnown RBP0.28□□□□□ -2.36
SSS1YDR086C YLR462WO13556 202 aa0.28□□□□□ -2.36
SSS1YDR086C RPC40P07703 335 aaKnown RBP0.28□□□□□ -2.36
SSS1YDR086C VMA11P32842 164 aa0.28□□□□□ -2.36
SSS1YDR086C PEX18P38855 283 aa0.28□□□□□ -2.36
SSS1YDR086C CTR2P38865 189 aa0.28□□□□□ -2.36
SSS1YDR086C VPS45P38932 577 aa0.28□□□□□ -2.36
SSS1YDR086C YEL075CP39972 122 aa0.28□□□□□ -2.36
SSS1YDR086C YER189WP40104 122 aa0.28□□□□□ -2.36
SSS1YDR086C JHD2P47156 728 aaPredicted RBP0.28□□□□□ -2.36
SSS1YDR086C TOS8P53147 276 aa0.28□□□□□ -2.36
SSS1YDR086C FAR8Q05040 523 aa0.28□□□□□ -2.36
SSS1YDR086C RRG8Q06109 277 aa0.28□□□□□ -2.36
SSS1YDR086C BCP1Q06338 283 aa0.28□□□□□ -2.36
SSS1YDR086C YPL162CQ12042 273 aa0.28□□□□□ -2.36
SSS1YDR086C YBL008W-AQ3E821 79 aa0.28□□□□□ -2.36
SSS1YDR086C MSW1P04803 379 aa0.27□□□□□ -2.37
SSS1YDR086C HEK2P38199 381 aaKnown RBP RIP-Chip data0.27□□□□□ -2.37not detected
SSS1YDR086C YGL185CP53100 379 aa0.27□□□□□ -2.37
SSS1YDR086C MAL13P53338 473 aa0.27□□□□□ -2.37
SSS1YDR086C SPP2Q02521 185 aa0.27□□□□□ -2.37
SSS1YDR086C VBA1Q04301 562 aa0.27□□□□□ -2.37
SSS1YDR086C VAC14Q06708 880 aa0.27□□□□□ -2.37
SSS1YDR086C YPR011CQ12251 326 aa0.27□□□□□ -2.37
SSS1YDR086C QCR8P08525 94 aa0.26□□□□□ -2.37
SSS1YDR086C PET9P18239 318 aaKnown RBP0.26□□□□□ -2.37
SSS1YDR086C GPI12P23797 304 aa0.26□□□□□ -2.37
SSS1YDR086C TMA19P35691 167 aaKnown RBP0.26□□□□□ -2.37
SSS1YDR086C FZO1P38297 855 aa0.26□□□□□ -2.37
SSS1YDR086C YER076CP40049 302 aa0.26□□□□□ -2.37
SSS1YDR086C YDR124WQ04608 324 aa0.26□□□□□ -2.37
SSS1YDR086C ARR2Q06597 130 aa0.26□□□□□ -2.37
SSS1YDR086C RRS1Q08746 203 aaKnown RBP0.26□□□□□ -2.37
SSS1YDR086C STH1P32597 1359 aa0.26□□□□□ -2.37
SSS1YDR086C SIR4P11978 1358 aa0.25□□□□□ -2.37
SSS1YDR086C GCD2P12754 651 aaPredicted RBP0.25□□□□□ -2.37
SSS1YDR086C YHR180WP38868 163 aa0.25□□□□□ -2.37
SSS1YDR086C LOC1P43586 204 aaPredicted RBP0.25□□□□□ -2.37
SSS1YDR086C MNT4P53745 580 aa0.25□□□□□ -2.37
SSS1YDR086C TPO4Q12256 659 aa0.25□□□□□ -2.37
SSS1YDR086C SME1Q12330 94 aaPredicted RBP0.25□□□□□ -2.37
SSS1YDR086C YPL119C-AQ3E751 87 aa0.25□□□□□ -2.37
SSS1YDR086C RPP0P05317 312 aaKnown RBP0.24□□□□□ -2.37
SSS1YDR086C POF1P25576 258 aa0.24□□□□□ -2.37
SSS1YDR086C CSM1P25651 190 aa0.24□□□□□ -2.37
SSS1YDR086C RMR1P53060 241 aa0.24□□□□□ -2.37
SSS1YDR086C GTR2P53290 341 aa0.24□□□□□ -2.37
SSS1YDR086C MPP6P53725 186 aaPredicted RBP0.24□□□□□ -2.37
SSS1YDR086C GRX2P17695 143 aaKnown RBP0.23□□□□□ -2.37
SSS1YDR086C HSM3P38348 480 aa0.23□□□□□ -2.37
SSS1YDR086C BIG1P38813 335 aa0.23□□□□□ -2.37
SSS1YDR086C YEL067CP39978 195 aa0.23□□□□□ -2.37
SSS1YDR086C RIO2P40160 425 aaKnown RBP0.23□□□□□ -2.37
SSS1YDR086C FIS1P40515 155 aa0.23□□□□□ -2.37
SSS1YDR086C YNL260CP53846 198 aa0.23□□□□□ -2.37
SSS1YDR086C YLR179CQ06252 201 aaKnown RBP0.23□□□□□ -2.37
SSS1YDR086C CUR1Q06469 252 aa0.23□□□□□ -2.37
SSS1YDR086C HEM25Q07534 307 aa0.23□□□□□ -2.37
SSS1YDR086C SNF8Q12483 233 aa0.23□□□□□ -2.37
SSS1YDR086C NSP1P14907 823 aaKnown RBP0.22□□□□□ -2.37
SSS1YDR086C FRS2P15625 503 aaKnown RBP0.22□□□□□ -2.37
SSS1YDR086C ERG24P32462 438 aaKnown RBP0.22□□□□□ -2.37
SSS1YDR086C TIR3P40552 269 aa0.22□□□□□ -2.37
SSS1YDR086C RPL33BP41056 107 aaKnown RBP0.22□□□□□ -2.37
SSS1YDR086C MRH4P53166 561 aa0.22□□□□□ -2.37
SSS1YDR086C ABZ2Q03266 374 aa0.22□□□□□ -2.37
SSS1YDR086C SYC1Q08553 188 aaPredicted RBP0.22□□□□□ -2.37
SSS1YDR086C ACC1Q00955 2233 aaKnown RBP0.21□□□□□ -2.38
SSS1YDR086C PRP8P33334 2413 aaKnown RBP0.21□□□□□ -2.38
SSS1YDR086C SSA3P09435 649 aaKnown RBP0.21□□□□□ -2.38
SSS1YDR086C SNA3P14359 133 aa0.21□□□□□ -2.38
SSS1YDR086C FZF1P32805 299 aa0.21□□□□□ -2.38
SSS1YDR086C MSA2P36157 363 aa0.21□□□□□ -2.38
SSS1YDR086C RSM25P40496 264 aa0.21□□□□□ -2.38
SSS1YDR086C DSN1P40568 576 aa0.21□□□□□ -2.38
SSS1YDR086C YGL034CP53186 121 aa0.21□□□□□ -2.38
SSS1YDR086C CDC14Q00684 551 aa0.21□□□□□ -2.38
SSS1YDR086C SPO19Q03029 223 aa0.21□□□□□ -2.38
SSS1YDR086C GOT1Q03554 138 aa0.21□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms