RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C SNZ2P53824 298 aa2.11□□□□□ -2.07
SRD1YCR018C APJ1P53940 528 aa2.11□□□□□ -2.07
SRD1YCR018C GOT1Q03554 138 aa2.11□□□□□ -2.07
SRD1YCR018C YDR124WQ04608 324 aa2.11□□□□□ -2.07
SRD1YCR018C RRP40Q08285 240 aaKnown RBP2.11□□□□□ -2.07
SRD1YCR018C RUD3Q12234 484 aaKnown RBP2.11□□□□□ -2.07
SRD1YCR018C SMT3Q12306 101 aaKnown RBP2.11□□□□□ -2.07
SRD1YCR018C SCC2Q04002 1493 aa2.1□□□□□ -2.07
SRD1YCR018C YPK9Q12697 1472 aa2.1□□□□□ -2.07
SRD1YCR018C IME2P32581 645 aa2.1□□□□□ -2.07
SRD1YCR018C THO1P40040 218 aaKnown RBP2.1□□□□□ -2.07
SRD1YCR018C YER085CP40058 173 aa2.1□□□□□ -2.07
SRD1YCR018C SPG4Q04438 115 aa2.1□□□□□ -2.07
SRD1YCR018C YLR283WQ05867 314 aa2.1□□□□□ -2.07
SRD1YCR018C COQ10Q08058 207 aa2.1□□□□□ -2.07
SRD1YCR018C YCF1P39109 1515 aaKnown RBP2.1□□□□□ -2.07
SRD1YCR018C FAB1P34756 2278 aa2.09□□□□□ -2.07
SRD1YCR018C TDH2P00358 332 aaKnown RBP2.09□□□□□ -2.07
SRD1YCR018C HIS3P06633 220 aa2.09□□□□□ -2.07
SRD1YCR018C MRPL25P23369 157 aa2.09□□□□□ -2.07
SRD1YCR018C BMH2P34730 273 aaKnown RBP2.09□□□□□ -2.07
SRD1YCR018C GOS1P38736 223 aa2.09□□□□□ -2.07
SRD1YCR018C YHR127WP38833 243 aaKnown RBP2.09□□□□□ -2.07
SRD1YCR018C YHB1P39676 399 aaKnown RBP2.09□□□□□ -2.07
SRD1YCR018C HOC1P47124 396 aa2.09□□□□□ -2.07
SRD1YCR018C YJR079WP47126 109 aa2.09□□□□□ -2.07
SRD1YCR018C YGL088WP53151 121 aa2.09□□□□□ -2.07
SRD1YCR018C CTF19Q02732 369 aa2.09□□□□□ -2.07
SRD1YCR018C RNH1Q04740 348 aa2.09□□□□□ -2.07
SRD1YCR018C YPR011CQ12251 326 aa2.09□□□□□ -2.07
SRD1YCR018C ESP1Q03018 1630 aa2.09□□□□□ -2.08
SRD1YCR018C RPO31P04051 1460 aa2.08□□□□□ -2.08
SRD1YCR018C RAD10P06838 210 aa2.08□□□□□ -2.08
SRD1YCR018C MATALPHA1P0CY06 175 aa2.08□□□□□ -2.08
SRD1YCR018C HMLALPHA1P0CY07 175 aa2.08□□□□□ -2.08
SRD1YCR018C RSA4P25382 515 aaKnown RBP2.08□□□□□ -2.08
SRD1YCR018C MIG1P27705 504 aa2.08□□□□□ -2.08
SRD1YCR018C DRE2P36152 348 aa2.08□□□□□ -2.08
SRD1YCR018C YBR096WP38256 230 aa2.08□□□□□ -2.08
SRD1YCR018C CUE1P38428 203 aa2.08□□□□□ -2.08
SRD1YCR018C JHD2P47156 728 aaPredicted RBP2.08□□□□□ -2.08
SRD1YCR018C MRH4P53166 561 aa2.08□□□□□ -2.08
SRD1YCR018C EMI1Q04406 187 aa2.08□□□□□ -2.08
SRD1YCR018C SYC1Q08553 188 aaPredicted RBP2.08□□□□□ -2.08
SRD1YCR018C YPL247CQ12523 523 aa2.08□□□□□ -2.08
SRD1YCR018C CHD1P32657 1468 aa2.07□□□□□ -2.08
SRD1YCR018C KRE1P17260 313 aa2.07□□□□□ -2.08
SRD1YCR018C TOM40P23644 387 aaKnown RBP2.07□□□□□ -2.08
SRD1YCR018C RPL24BP24000 155 aaKnown RBP2.07□□□□□ -2.08
SRD1YCR018C PPA2P28239 310 aa2.07□□□□□ -2.08
SRD1YCR018C EHD3P28817 500 aa2.07□□□□□ -2.08
SRD1YCR018C YKR032WP36127 104 aa2.07□□□□□ -2.08
SRD1YCR018C ECM13P38195 257 aa2.07□□□□□ -2.08
SRD1YCR018C RTR1P40084 226 aaPredicted RBP2.07□□□□□ -2.08
SRD1YCR018C YMR144WP40214 342 aaKnown RBP2.07□□□□□ -2.08
SRD1YCR018C YJL144WP47009 104 aa2.07□□□□□ -2.08
SRD1YCR018C YJR141WP47172 347 aaPredicted RBP2.07□□□□□ -2.08
SRD1YCR018C MDM34P53083 459 aa2.07□□□□□ -2.08
SRD1YCR018C SYF2P53277 215 aaPredicted RBP2.07□□□□□ -2.08
SRD1YCR018C NOP13P53883 403 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
SRD1YCR018C FCF1Q05498 189 aaPredicted RBP2.07□□□□□ -2.08
SRD1YCR018C YLR179CQ06252 201 aaKnown RBP2.07□□□□□ -2.08
SRD1YCR018C FEX1Q08913 375 aa2.07□□□□□ -2.08
SRD1YCR018C FEX2Q08991 375 aa2.07□□□□□ -2.08
SRD1YCR018C YLR126CQ12288 251 aa2.07□□□□□ -2.08
SRD1YCR018C GEP5Q12393 293 aa2.07□□□□□ -2.08
SRD1YCR018C DNF1P32660 1571 aa2.06□□□□□ -2.08
SRD1YCR018C GDH2P33327 1092 aaKnown RBP2.06□□□□□ -2.08
SRD1YCR018C YGP1P38616 354 aaKnown RBP2.06□□□□□ -2.08
SRD1YCR018C SPO73P40031 143 aa2.06□□□□□ -2.08
SRD1YCR018C YER084WP40057 128 aa2.06□□□□□ -2.08
SRD1YCR018C COX15P40086 486 aa2.06□□□□□ -2.08
SRD1YCR018C TIM11P81449 96 aaPredicted RBP2.06□□□□□ -2.08
SRD1YCR018C SPO77Q06134 477 aa2.06□□□□□ -2.08
SRD1YCR018C SWI1P09547 1314 aa2.06□□□□□ -2.08
SRD1YCR018C MYO2P19524 1574 aaKnown RBP2.06□□□□□ -2.08
SRD1YCR018C SEC22P22214 214 aa2.05□□□□□ -2.08
SRD1YCR018C PPH21P23594 369 aa2.05□□□□□ -2.08
SRD1YCR018C VPS21P36017 210 aaKnown RBP2.05□□□□□ -2.08
SRD1YCR018C YER188WP40103 239 aa2.05□□□□□ -2.08
SRD1YCR018C YER189WP40104 122 aa2.05□□□□□ -2.08
SRD1YCR018C GCN20P43535 752 aaKnown RBP2.05□□□□□ -2.08
SRD1YCR018C PIR5P46999 287 aa2.05□□□□□ -2.08
SRD1YCR018C YMR114CQ04471 368 aaKnown RBP2.05□□□□□ -2.08
SRD1YCR018C YOR186WQ08560 144 aa2.05□□□□□ -2.08
SRD1YCR018C NOT5Q12514 560 aaPredicted RBP2.05□□□□□ -2.08
SRD1YCR018C TOP2P06786 1428 aaKnown RBP2.05□□□□□ -2.08
SRD1YCR018C CDC25P04821 1589 aa2.05□□□□□ -2.08
SRD1YCR018C RHO1P06780 209 aaKnown RBP2.04□□□□□ -2.08
SRD1YCR018C NHP6BP11633 99 aaKnown RBP2.04□□□□□ -2.08
SRD1YCR018C POL1P13382 1468 aa2.04□□□□□ -2.08
SRD1YCR018C YCR102CP25608 368 aa2.04□□□□□ -2.08
SRD1YCR018C NTG1P31378 399 aa2.04□□□□□ -2.08
SRD1YCR018C VMA6P32366 345 aaKnown RBP2.04□□□□□ -2.08
SRD1YCR018C RCN1P36054 211 aa2.04□□□□□ -2.08
SRD1YCR018C STU1P38198 1513 aa2.04□□□□□ -2.08
SRD1YCR018C OTU1P43558 301 aa2.04□□□□□ -2.08
SRD1YCR018C GON7P46984 123 aa2.04□□□□□ -2.08
SRD1YCR018C RPC17P47076 161 aa2.04□□□□□ -2.08
SRD1YCR018C YGL034CP53186 121 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 91.2 ms