RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 SLC12A1Q13621 1099 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 RNF149Q8NC42 400 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 TUFT1Q9NNX1 390 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 TOPORSQ9NS56 1045 aaPredicted RBP12.77□□□□□ -0.37
ERBB2-206ENST00000578373 SPATS2LQ9NUQ6 558 aaKnown RBP12.77□□□□□ -0.37
ERBB2-206ENST00000578373 SCOCQ9UIL1 159 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 PFASO15067 1338 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 SPATA31A1Q5TZJ5 1347 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 ESYT2A0FGR8 921 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 FOXP2O15409 715 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 MED7O43513 233 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 HOXA7P31268 230 aaPredicted RBP12.76□□□□□ -0.37
ERBB2-206ENST00000578373 CPA2P48052 419 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 CDR2Q01850 454 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 OVGP1Q12889 678 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 CCDC117Q8IWD4 279 aaPredicted RBP12.76□□□□□ -0.37
ERBB2-206ENST00000578373 DAGLBQ8NCG7 672 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 EXT2Q93063 718 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 HDAC11Q96DB2 347 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 MCEEQ96PE7 176 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 NYAP2Q9P242 653 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 USP15Q9Y4E8 981 aaPredicted RBP12.76□□□□□ -0.37
ERBB2-206ENST00000578373 LRRC10BA6NIK2 292 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 CASQ2O14958 399 aaPredicted RBP12.76□□□□□ -0.37
ERBB2-206ENST00000578373 LPXNO60711 386 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 AGTP01019 485 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 CASP2P42575 452 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 ORC1Q13415 861 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 SEPT6Q14141 434 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 CCHCR1Q8TD31 782 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 DDX27Q96GQ7 796 aaKnown RBP12.76□□□□□ -0.37
ERBB2-206ENST00000578373 TARS2Q9BW92 718 aaKnown RBP12.76□□□□□ -0.37
ERBB2-206ENST00000578373 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 SUCLA2Q9P2R7 463 aaPredicted RBP12.76□□□□□ -0.37
ERBB2-206ENST00000578373 KIF20BQ96Q89 1820 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 BCAR1P56945 870 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 STXBP2Q15833 593 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 HIF1AQ16665 826 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 MYLK4Q86YV6 388 aaPredicted RBP12.76□□□□□ -0.37
ERBB2-206ENST00000578373 CRLF3Q8IUI8 442 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 TMEM139Q8IV31 216 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 CCDC33Q8N5R6 958 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 RPAP3Q9H6T3 665 aaPredicted RBP12.76□□□□□ -0.37
ERBB2-206ENST00000578373 NEU2Q9Y3R4 380 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 ITSN1Q15811 1721 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 AFF2P51816 1311 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 TISP43B9A030 160 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 MAP2K7O14733 419 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 SLC16A3O15427 465 aaKnown RBP12.76□□□□□ -0.37
ERBB2-206ENST00000578373 MAP3K7O43318 606 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 CDH16O75309 829 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 APRTP07741 180 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 FIGNQ5HY92 759 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 AADACL2Q6P093 401 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 C4orf50Q6ZRC1 276 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 LONP2Q86WA8 852 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 MTRQ99707 1265 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 UBN1Q9NPG3 1134 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 ZNF302Q9NR11 478 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 TLK1Q9UKI8 766 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 CHMP2BQ9UQN3 213 aa12.76□□□□□ -0.37
ERBB2-206ENST00000578373 M0QZ92 97 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 CREB3O43889 395 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 SH3BP5O60239 455 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 CASP5P51878 434 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 RNASELQ05823 741 aaKnown RBP12.75□□□□□ -0.37
ERBB2-206ENST00000578373 MAPK7Q13164 816 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 C1orf146Q5VVC0 180 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 AP1ARQ63HQ0 302 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 REXO2Q9Y3B8 237 aaKnown RBP12.75□□□□□ -0.37
ERBB2-206ENST00000578373 PITPNM2Q9BZ72 1349 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 CCT8L1PA6NM43 557 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 ENO4A6NNW6 628 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 CALCAP01258 141 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 SESN2P58004 480 aaPredicted RBP12.75□□□□□ -0.37
ERBB2-206ENST00000578373 PACS2Q86VP3 889 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 AFAP1L2Q8N4X5 818 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 GABPB2Q8TAK5 448 aaPredicted RBP12.75□□□□□ -0.37
ERBB2-206ENST00000578373 NSMCE1Q8WV22 266 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 PSPC1Q8WXF1 523 aaKnown RBP12.75□□□□□ -0.37
ERBB2-206ENST00000578373 PRMT6Q96LA8 375 aaPredicted RBP12.75□□□□□ -0.37
ERBB2-206ENST00000578373 IKZF4Q9H2S9 585 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 DHX35Q9H5Z1 703 aaKnown RBP12.75□□□□□ -0.37
ERBB2-206ENST00000578373 ARL2BPQ9Y2Y0 163 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 IGF2BP3O00425 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
ERBB2-206ENST00000578373 HLA-DRAP01903 254 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 GARSP41250 739 aaKnown RBP12.75□□□□□ -0.37
ERBB2-206ENST00000578373 FAXCQ5TGI0 409 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 SLC13A5Q86YT5 568 aaPredicted RBP12.75□□□□□ -0.37
ERBB2-206ENST00000578373 CARD9Q9H257 536 aa12.75□□□□□ -0.37
ERBB2-206ENST00000578373 PABPC3Q9H361 631 aaKnown RBP12.75□□□□□ -0.37
ERBB2-206ENST00000578373 LDHAP00338 332 aaKnown RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 KRT3P12035 628 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 MX2P20592 715 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 RFC1P35251 1148 aaPredicted RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 COILP38432 576 aaPredicted RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 ATXN3P54252 364 aaPredicted RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 CYP4A22Q5TCH4 519 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 MEI1Q5TIA1 1274 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 IRF2BP1Q8IU81 584 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms