RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 METTL13Q8N6R0 699 aa20.54■□□□□ 0.88
HMBOX1-215ENST00000560599 ZNF516Q92618 1163 aa20.54■□□□□ 0.88
HMBOX1-215ENST00000560599 HAPLN2Q9GZV7 340 aa20.54■□□□□ 0.88
HMBOX1-215ENST00000560599 EFCC1Q9HA90 598 aa20.54■□□□□ 0.88
HMBOX1-215ENST00000560599 OSGEPQ9NPF4 335 aa20.54■□□□□ 0.88
HMBOX1-215ENST00000560599 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.54■□□□□ 0.884e-6■■■■■ 72.1
HMBOX1-215ENST00000560599 CTTNBP2NLQ9P2B4 639 aa20.54■□□□□ 0.88
HMBOX1-215ENST00000560599 MORF4L1Q9UBU8 362 aa20.54■□□□□ 0.88
HMBOX1-215ENST00000560599 TMEM59LQ9UK28 342 aa20.54■□□□□ 0.88
HMBOX1-215ENST00000560599 NOC2LQ9Y3T9 749 aaKnown RBP20.54■□□□□ 0.88
HMBOX1-215ENST00000560599 MIF4GDA9UHW6 222 aaKnown RBP20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 PDHXO00330 501 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 ZBTB48P10074 688 aaPredicted RBP20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 TBXAS1P24557 533 aaPredicted RBP20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 MAPK6Q16659 721 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 ZNF792Q3KQV3 632 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 IFT20Q8IY31 132 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 AENQ8WTP8 325 aaKnown RBP20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 TATDN2Q93075 761 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 TRIM11Q96F44 468 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 ZBTB45Q96K62 511 aaPredicted RBP20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 PCDHB18PQ96TA0 734 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 GOLPH3Q9H4A6 298 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 PDE11AQ9HCR9 933 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 GTF3C4Q9UKN8 822 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 TTC7AQ9ULT0 858 aaPredicted RBP20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 ZSWIM8A7E2V4 1837 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 CNTNAP2Q9UHC6 1331 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 CCL15-CCL14A0A0B4J2E2 113 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 ZBTB42B2RXF5 422 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 CLDN3O15551 220 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 ASAP2O43150 1006 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 MSCO60682 206 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 GH1P01241 217 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 MMEP08473 750 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 CYP2C8P10632 490 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 EPHB4P54760 987 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 ARHGAP1Q07960 439 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 DRP2Q13474 957 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 CCL15Q16663 113 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 ZNF484Q5JVG2 852 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 PPP1R2P3Q6NXS1 205 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 WDR49Q8IV35 697 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 NAP1L3Q99457 506 aaPredicted RBP20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 CARD9Q9H257 536 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 ZNF408Q9H9D4 720 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 SUGCTQ9HAC7 445 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 ERAP1Q9NZ08 941 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 UVRAGQ9P2Y5 699 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 IVNS1ABPQ9Y6Y0 642 aa20.53■□□□□ 0.88
HMBOX1-215ENST00000560599 COL1A2P08123 1366 aa20.52■□□□□ 0.88
HMBOX1-215ENST00000560599 RBM47A0AV96 593 aaKnown RBP20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 OGTO15294 1046 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 DDX3YO15523 660 aaKnown RBP20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 CLSTN1O94985 981 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 CYP1A2P05177 515 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 EDN1P05305 212 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 HARSP12081 509 aaKnown RBP20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 MCL1Q07820 350 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 PAK2Q13177 524 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 NNTQ13423 1086 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 CLEC16AQ2KHT3 1053 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 EMBQ6PCB8 327 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 TRIM72Q6ZMU5 477 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 UBL4BQ8N7F7 174 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 RNF149Q8NC42 400 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 ZNF653Q96CK0 615 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 KRT12Q99456 494 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 ACO2Q99798 780 aaKnown RBP20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 PI4K2AQ9BTU6 479 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 IMPG2Q9BZV3 1241 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 DMGDHQ9UI17 866 aaKnown RBP20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 PLXNA1Q9UIW2 1896 aa20.52■□□□□ 0.87
HMBOX1-215ENST00000560599 ZNF236Q9UL36 1845 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 PTPRJQ12913 1337 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 BTBD19C9JJ37 291 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 STRNO43815 780 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 PHACTR2O75167 634 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 HEXIM1O94992 359 aaKnown RBP20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 VNN1O95497 513 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 ADORA2AP29274 412 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 MKRN4PQ13434 485 aaPredicted RBP20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 CUL2Q13617 745 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 LMBRD2Q68DH5 695 aaPredicted RBP20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 ACAD10Q6JQN1 1059 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 LRRC71Q8N4P6 559 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 DDX1Q92499 740 aaKnown RBP20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 COPS5Q92905 334 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 EMID1Q96A84 441 aaPredicted RBP20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 RPS6KC1Q96S38 1066 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 MED4Q9NPJ6 270 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 GDF3Q9NR23 364 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 COG5Q9UP83 839 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 PCDHB2Q9Y5E7 798 aa20.51■□□□□ 0.87
HMBOX1-215ENST00000560599 ZMYND10O75800 440 aa20.5■□□□□ 0.87
HMBOX1-215ENST00000560599 CLTAP09496 248 aa20.5■□□□□ 0.87
HMBOX1-215ENST00000560599 SRGAP2CP0DJJ0 459 aa20.5■□□□□ 0.87
HMBOX1-215ENST00000560599 MYBL1P10243 752 aa20.5■□□□□ 0.87
HMBOX1-215ENST00000560599 WNT7BP56706 349 aa20.5■□□□□ 0.87
HMBOX1-215ENST00000560599 PPP2R5EQ16537 467 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms