RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 PPIGQ13427 754 aaKnown RBP eCLIP17.97■□□□□ 0.471e-7■■□□□ 14.5
TPM1-219ENST00000559397 DCAF4L1Q3SXM0 396 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 ZSWIM2Q8NEG5 633 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 IQCDQ96DY2 449 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 ADPGKQ9BRR6 497 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 PCIF1Q9H4Z3 704 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 HSPBP1Q9NZL4 362 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 ARMCX3Q9UH62 379 aaPredicted RBP17.97■□□□□ 0.47
TPM1-219ENST00000559397 CAPN11Q9UMQ6 739 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 TNRC18O15417 2968 aaPredicted RBP17.97■□□□□ 0.47
TPM1-219ENST00000559397 ENPP3O14638 875 aa17.96■□□□□ 0.47
TPM1-219ENST00000559397 EPB41P11171 864 aaKnown RBP17.96■□□□□ 0.47
TPM1-219ENST00000559397 MATR3P43243 847 aaKnown RBP eCLIP17.96■□□□□ 0.47
TPM1-219ENST00000559397 CASP4P49662 377 aa17.96■□□□□ 0.47
TPM1-219ENST00000559397 EPHB4P54760 987 aa17.96■□□□□ 0.47
TPM1-219ENST00000559397 CPLX3Q8WVH0 158 aa17.96■□□□□ 0.47
TPM1-219ENST00000559397 BAG1Q99933 345 aaPredicted RBP17.96■□□□□ 0.47
TPM1-219ENST00000559397 MSTO1Q9BUK6 570 aa17.96■□□□□ 0.47
TPM1-219ENST00000559397 FAM105AQ9NUU6 356 aa17.96■□□□□ 0.47
TPM1-219ENST00000559397 AGO2Q9UKV8 859 aaKnown RBP17.96■□□□□ 0.47
TPM1-219ENST00000559397 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.96■□□□□ 0.47
TPM1-219ENST00000559397 A0A0U1RQF3 1178 aa17.96■□□□□ 0.47
TPM1-219ENST00000559397 TTC26A0AVF1 554 aa17.96■□□□□ 0.47
TPM1-219ENST00000559397 C9IYK1 514 aa17.96■□□□□ 0.47
TPM1-219ENST00000559397 HARSP12081 509 aaKnown RBP17.96■□□□□ 0.47
TPM1-219ENST00000559397 FAM189BP81408 668 aa17.96■□□□□ 0.47
TPM1-219ENST00000559397 CEP120Q8N960 986 aa17.96■□□□□ 0.47
TPM1-219ENST00000559397 SMG8Q8ND04 991 aaKnown RBP17.96■□□□□ 0.47
TPM1-219ENST00000559397 PCDHB2Q9Y5E7 798 aa17.96■□□□□ 0.47
TPM1-219ENST00000559397 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.95■□□□□ 0.46
TPM1-219ENST00000559397 A0A1W2PQJ5 194 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 KIAA0391O15091 583 aaKnown RBP17.95■□□□□ 0.46
TPM1-219ENST00000559397 OGTO15294 1046 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 ARHGAP6O43182 974 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 ZNF623O75123 536 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 PSMC2P35998 433 aaKnown RBP17.95■□□□□ 0.46
TPM1-219ENST00000559397 KLK7P49862 253 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 CYP2J2P51589 502 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 IKBKEQ14164 716 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 ZBTB41Q5SVQ8 909 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 CRELD2Q6UXH1 353 aaPredicted RBP17.95■□□□□ 0.46
TPM1-219ENST00000559397 SLC24A5Q71RS6 500 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 APBB1IPQ7Z5R6 666 aaPredicted RBP17.95■□□□□ 0.46
TPM1-219ENST00000559397 XXYLT1Q8NBI6 393 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 SAAL1Q96ER3 474 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 FBXL18Q96ME1 805 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 LBHD1Q9BQE6 289 aaPredicted RBP17.95■□□□□ 0.46
TPM1-219ENST00000559397 NAA15Q9BXJ9 866 aaKnown RBP17.95■□□□□ 0.46
TPM1-219ENST00000559397 C1orf112Q9NSG2 853 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 IPPQ9Y573 584 aa17.95■□□□□ 0.46
TPM1-219ENST00000559397 EXTL3O43909 919 aa17.94■□□□□ 0.46
TPM1-219ENST00000559397 KRT9P35527 623 aa17.94■□□□□ 0.46
TPM1-219ENST00000559397 KCNMA1Q12791 1236 aa17.94■□□□□ 0.46
TPM1-219ENST00000559397 SEZ6Q53EL9 994 aa17.94■□□□□ 0.46
TPM1-219ENST00000559397 E4F1Q66K89 784 aaPredicted RBP17.94■□□□□ 0.46
TPM1-219ENST00000559397 MRPL10Q7Z7H8 261 aaKnown RBP17.94■□□□□ 0.46
TPM1-219ENST00000559397 TMEM192Q8IY95 271 aa17.94■□□□□ 0.46
TPM1-219ENST00000559397 FAM186BQ8IYM0 893 aa17.94■□□□□ 0.46
TPM1-219ENST00000559397 GPD1LQ8N335 351 aa17.94■□□□□ 0.46
TPM1-219ENST00000559397 TRIM6Q9C030 488 aaPredicted RBP17.94■□□□□ 0.46
TPM1-219ENST00000559397 NXF3Q9H4D5 531 aaKnown RBP17.94■□□□□ 0.46
TPM1-219ENST00000559397 ABHD10Q9NUJ1 306 aa17.94■□□□□ 0.46
TPM1-219ENST00000559397 LUC7L2Q9Y383 392 aaKnown RBP17.94■□□□□ 0.46
TPM1-219ENST00000559397 HES2Q9Y543 173 aa17.94■□□□□ 0.46
TPM1-219ENST00000559397 TTC3P53804 2025 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 ABHD14A-ACY1A0A1B0GW23 586 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 GOLGA8IPA6NC78 632 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 GOLGA8JA6NMD2 632 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 LDHAP00338 332 aaKnown RBP17.93■□□□□ 0.46
TPM1-219ENST00000559397 ATF7P17544 494 aaPredicted RBP17.93■□□□□ 0.46
TPM1-219ENST00000559397 TNFSF9P41273 254 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 GRM5P41594 1212 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 ACOT2P49753 483 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 RAB27AP51159 221 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 KCNH2Q12809 1159 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 TMEM240Q5SV17 173 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 ZNF365Q70YC5 407 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 ZNF598Q86UK7 904 aaKnown RBP17.93■□□□□ 0.46
TPM1-219ENST00000559397 ECHDC2Q86YB7 292 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 THNSL1Q8IYQ7 743 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 CCAR2Q8N163 923 aaKnown RBP17.93■□□□□ 0.46
TPM1-219ENST00000559397 DNAJC7Q99615 494 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 FAM213AQ9BRX8 229 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 RNF39Q9H2S5 420 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 CPSF3Q9UKF6 684 aaKnown RBP17.93■□□□□ 0.46
TPM1-219ENST00000559397 EXOC3O60645 756 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 CAPN15O75808 1086 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 BAIAP3O94812 1187 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 STAG3L1P0CL83 205 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 SKIP12755 728 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 TRIM21P19474 475 aaKnown RBP17.93■□□□□ 0.46
TPM1-219ENST00000559397 MCCD1P59942 119 aaPredicted RBP17.93■□□□□ 0.46
TPM1-219ENST00000559397 KYAT1Q16773 422 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 PSRC1Q6PGN9 363 aaPredicted RBP17.93■□□□□ 0.46
TPM1-219ENST00000559397 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.93■□□□□ 0.46
TPM1-219ENST00000559397 CBWD2Q8IUF1 395 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 CRIPAKQ8N1N5 446 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 OR8K1Q8NGG5 319 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 SLC35C1Q96A29 364 aa17.93■□□□□ 0.46
TPM1-219ENST00000559397 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.93■□□□□ 0.468e-7■■■□□ 15.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms