RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 RARGP13631 454 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 GCLMP48507 274 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 RNASELQ05823 741 aaKnown RBP13.22□□□□□ -0.29
HDAC7-230ENST00000552960 RINT1Q6NUQ1 792 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 CAPN12Q6ZSI9 719 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 FAM83AQ86UY5 434 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 KAT5Q92993 513 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 WNK4Q96J92 1243 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 RMDN2Q96LZ7 410 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 AGBL1Q96MI9 1066 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 ZSWIM1Q9BR11 485 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 EME2A4GXA9 379 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-230ENST00000552960 TISP43B9A030 160 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 THAP12O43422 761 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 ECEL1O95672 775 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 COILP38432 576 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-230ENST00000552960 MSH2P43246 934 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 VSIG1Q86XK7 387 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 IFT74Q96LB3 600 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 ZNF570Q96NI8 536 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 SH2D3AQ9BRG2 576 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 EBF2Q9HAK2 575 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 KLHL14Q9P2G3 628 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 NENFQ9UMX5 172 aa13.22□□□□□ -0.29
HDAC7-230ENST00000552960 H0Y3Z8 333 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 SLC16A3O15427 465 aaKnown RBP13.21□□□□□ -0.29
HDAC7-230ENST00000552960 GPC5P78333 572 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 DLG4P78352 724 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 ZNF268Q14587 947 aaPredicted RBP13.21□□□□□ -0.29
HDAC7-230ENST00000552960 HP1BP3Q5SSJ5 553 aaPredicted RBP13.21□□□□□ -0.29
HDAC7-230ENST00000552960 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 RHOT2Q8IXI1 618 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 ZBTB10Q96DT7 871 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 HOMER2Q9NSB8 354 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 NCANO14594 1321 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 BRCA2P51587 3418 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 MSH4O15457 936 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 DDNO94850 711 aaPredicted RBP13.21□□□□□ -0.29
HDAC7-230ENST00000552960 BCRP11274 1271 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 CHKAP35790 457 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 GJC1P36383 396 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 KRT17Q04695 432 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 SGO2Q562F6 1265 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 RNF207Q6ZRF8 634 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 CPXCR1Q8N123 301 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 PPM1KQ8N3J5 372 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 DYDC2Q96IM9 177 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 NAP1L4Q99733 375 aaKnown RBP13.21□□□□□ -0.29
HDAC7-230ENST00000552960 VPS33BQ9H267 617 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 PARVGQ9HBI0 331 aa13.21□□□□□ -0.29
HDAC7-230ENST00000552960 EMSYQ7Z589 1322 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 DDX39AO00148 427 aaKnown RBP13.2□□□□□ -0.3
HDAC7-230ENST00000552960 PEX10O60683 326 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 ANXA13P27216 316 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 SPIRE1Q08AE8 756 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 TAF11Q15544 211 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 CAPRIN2Q6IMN6 1127 aaKnown RBP13.2□□□□□ -0.3
HDAC7-230ENST00000552960 CYP4F22Q6NT55 531 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 CRELD2Q6UXH1 353 aaPredicted RBP13.2□□□□□ -0.3
HDAC7-230ENST00000552960 ETNPPLQ8TBG4 499 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 C9orf72Q96LT7 481 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 NKIRAS1Q9NYS0 192 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 ARL2BPQ9Y2Y0 163 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 ATP2A2P16615 1042 aaKnown RBP13.2□□□□□ -0.3
HDAC7-230ENST00000552960 MPP2Q14168 576 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 ZNF449Q6P9G9 518 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 SLC13A5Q86YT5 568 aaPredicted RBP13.2□□□□□ -0.3
HDAC7-230ENST00000552960 ARHGEF19Q8IW93 802 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 CCHCR1Q8TD31 782 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 RUNDC3BQ96NL0 473 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 TMEM237Q96Q45 408 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 NUP85Q9BW27 656 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 HEMGNQ9BXL5 484 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 GPR88Q9GZN0 384 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 MIF4GDA9UHW6 222 aaKnown RBP13.2□□□□□ -0.3
HDAC7-230ENST00000552960 SPAG7O75391 227 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 SGPL1O95470 568 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 ADCY8P40145 1251 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 DRG2P55039 364 aaKnown RBP13.2□□□□□ -0.3
HDAC7-230ENST00000552960 MTMR2Q13614 643 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 ZFYVE27Q5T4F4 411 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 INTS8Q75QN2 995 aaKnown RBP13.2□□□□□ -0.3
HDAC7-230ENST00000552960 ARMC2Q8NEN0 867 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 ZNF653Q96CK0 615 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 PITPNM3Q9BZ71 974 aa13.2□□□□□ -0.3
HDAC7-230ENST00000552960 RTN2O75298 545 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 CALCAP01258 141 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 CCND1P24385 295 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 SSR1P43307 286 aaKnown RBP13.19□□□□□ -0.3
HDAC7-230ENST00000552960 SLC8A3P57103 927 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 C2CD6Q53TS8 623 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 SPDYCQ5MJ68 293 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 ANKRD20A2Q5SQ80 823 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 ANKRD20A1Q5TYW2 823 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 ANKRD20A3Q5VUR7 823 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 FKBP1CQ5VVH2 108 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 BTNL9Q6UXG8 535 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 CROCCP2Q86T23 111 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 PRUNE1Q86TP1 453 aa13.19□□□□□ -0.3
HDAC7-230ENST00000552960 CYP4X1Q8N118 509 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms