RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ATXN7L2Q5T6C5 722 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-209ENST00000539197 AGAP9Q5VTM2 703 aa7.32□□□□□ -1.24
CCDC7-209ENST00000539197 HDGFL2Q7Z4V5 671 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-209ENST00000539197 TRMT2AQ8IZ69 625 aaKnown RBP7.32□□□□□ -1.24
CCDC7-209ENST00000539197 SIMC1Q8NDZ2 872 aa7.32□□□□□ -1.24
CCDC7-209ENST00000539197 OR56A1Q8NGH5 318 aa7.32□□□□□ -1.24
CCDC7-209ENST00000539197 TSPEARQ8WU66 669 aa7.32□□□□□ -1.24
CCDC7-209ENST00000539197 RIN2Q8WYP3 895 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-209ENST00000539197 NELL1Q92832 810 aa7.32□□□□□ -1.24
CCDC7-209ENST00000539197 RSAD1Q9HA92 442 aa7.32□□□□□ -1.24
CCDC7-209ENST00000539197 COL11A2P13942 1736 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-209ENST00000539197 ATRNL1Q5VV63 1379 aa7.32□□□□□ -1.24
CCDC7-209ENST00000539197 AKR1B10O60218 316 aa7.31□□□□□ -1.24
CCDC7-209ENST00000539197 CDKL5O76039 1030 aa7.31□□□□□ -1.24
CCDC7-209ENST00000539197 MPLP40238 635 aa7.31□□□□□ -1.24
CCDC7-209ENST00000539197 FSCN1Q16658 493 aaKnown RBP7.31□□□□□ -1.24
CCDC7-209ENST00000539197 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.31□□□□□ -1.24
CCDC7-209ENST00000539197 SPDYE7PQ495Y7 208 aa7.31□□□□□ -1.24
CCDC7-209ENST00000539197 TSHZ3Q63HK5 1081 aa7.31□□□□□ -1.24
CCDC7-209ENST00000539197 B3GNTL1Q67FW5 361 aaPredicted RBP7.31□□□□□ -1.24
CCDC7-209ENST00000539197 RHOT2Q8IXI1 618 aa7.31□□□□□ -1.24
CCDC7-209ENST00000539197 TGFBRAP1Q8WUH2 860 aa7.31□□□□□ -1.24
CCDC7-209ENST00000539197 KLHL11Q9NVR0 708 aa7.31□□□□□ -1.24
CCDC7-209ENST00000539197 SNRPA1P09661 255 aaKnown RBP7.3□□□□□ -1.24
CCDC7-209ENST00000539197 ELLP55199 621 aaPredicted RBP7.3□□□□□ -1.24
CCDC7-209ENST00000539197 LRCH2Q5VUJ6 765 aa7.3□□□□□ -1.24
CCDC7-209ENST00000539197 MED25Q71SY5 747 aa7.3□□□□□ -1.24
CCDC7-209ENST00000539197 GPR149Q86SP6 731 aa7.3□□□□□ -1.24
CCDC7-209ENST00000539197 FAM98AQ8NCA5 519 aaKnown RBP7.3□□□□□ -1.24
CCDC7-209ENST00000539197 STON2Q8WXE9 905 aa7.3□□□□□ -1.24
CCDC7-209ENST00000539197 TESQ9UGI8 421 aaKnown RBP7.3□□□□□ -1.24
CCDC7-209ENST00000539197 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.29□□□□□ -1.24
CCDC7-209ENST00000539197 PRSS23O95084 383 aa7.29□□□□□ -1.24
CCDC7-209ENST00000539197 ENPP1P22413 925 aa7.29□□□□□ -1.24
CCDC7-209ENST00000539197 ZNF572Q7Z3I7 529 aaPredicted RBP7.29□□□□□ -1.24
CCDC7-209ENST00000539197 STRA8Q7Z7C7 330 aa7.29□□□□□ -1.24
CCDC7-209ENST00000539197 MAPKAPK5Q8IW41 473 aa7.29□□□□□ -1.24
CCDC7-209ENST00000539197 UBR7Q8N806 425 aa7.29□□□□□ -1.24
CCDC7-209ENST00000539197 CAGE1Q8TC20 777 aa7.29□□□□□ -1.24
CCDC7-209ENST00000539197 USP7Q93009 1102 aa7.29□□□□□ -1.24
CCDC7-209ENST00000539197 REXO4Q9GZR2 422 aaKnown RBP7.29□□□□□ -1.24
CCDC7-209ENST00000539197 QRSL1Q9H0R6 528 aaKnown RBP7.29□□□□□ -1.24
CCDC7-209ENST00000539197 NOX1Q9Y5S8 564 aa7.29□□□□□ -1.24
CCDC7-209ENST00000539197 MAST3O60307 1309 aa7.28□□□□□ -1.24
CCDC7-209ENST00000539197 ALOX15P16050 662 aaPredicted RBP7.28□□□□□ -1.24
CCDC7-209ENST00000539197 FDXRP22570 491 aa7.28□□□□□ -1.24
CCDC7-209ENST00000539197 ZNF362Q5T0B9 420 aaPredicted RBP7.28□□□□□ -1.24
CCDC7-209ENST00000539197 AFMIDQ63HM1 303 aa7.28□□□□□ -1.24
CCDC7-209ENST00000539197 TMEM132CQ8N3T6 1108 aa7.28□□□□□ -1.24
CCDC7-209ENST00000539197 BOLLQ8N9W6 283 aaKnown RBP7.28□□□□□ -1.24
CCDC7-209ENST00000539197 RAX2Q96IS3 184 aa7.28□□□□□ -1.24
CCDC7-209ENST00000539197 Q96MF0 132 aa7.28□□□□□ -1.24
CCDC7-209ENST00000539197 ACAP3Q96P50 834 aa7.28□□□□□ -1.24
CCDC7-209ENST00000539197 LDAHQ9H6V9 325 aa7.28□□□□□ -1.24
CCDC7-209ENST00000539197 VTA1Q9NP79 307 aa7.28□□□□□ -1.24
CCDC7-209ENST00000539197 DMRT3Q9NQL9 472 aa7.28□□□□□ -1.24
CCDC7-209ENST00000539197 TLK1Q9UKI8 766 aa7.28□□□□□ -1.24
CCDC7-209ENST00000539197 AATKQ6ZMQ8 1374 aa7.28□□□□□ -1.24
CCDC7-209ENST00000539197 MGST3O14880 152 aa7.27□□□□□ -1.25
CCDC7-209ENST00000539197 SLC6A2P23975 617 aa7.27□□□□□ -1.25
CCDC7-209ENST00000539197 OCA2Q04671 838 aa7.27□□□□□ -1.25
CCDC7-209ENST00000539197 STRN3Q13033 797 aa7.27□□□□□ -1.25
CCDC7-209ENST00000539197 RRP12Q5JTH9 1297 aaKnown RBP7.27□□□□□ -1.25
CCDC7-209ENST00000539197 GJC2Q5T442 439 aaPredicted RBP7.27□□□□□ -1.25
CCDC7-209ENST00000539197 RNF180Q86T96 592 aa7.27□□□□□ -1.25
CCDC7-209ENST00000539197 GPR156Q8NFN8 814 aa7.27□□□□□ -1.25
CCDC7-209ENST00000539197 OR7D4Q8NG98 312 aa7.27□□□□□ -1.25
CCDC7-209ENST00000539197 MRI1Q9BV20 369 aa7.27□□□□□ -1.25
CCDC7-209ENST00000539197 ALOXE3Q9BYJ1 711 aa7.27□□□□□ -1.25
CCDC7-209ENST00000539197 CDK4P11802 303 aa7.26□□□□□ -1.25
CCDC7-209ENST00000539197 SREBF1P36956 1147 aa7.26□□□□□ -1.25
CCDC7-209ENST00000539197 ATXN1P54253 815 aaKnown RBP7.26□□□□□ -1.25
CCDC7-209ENST00000539197 SESN3P58005 492 aa7.26□□□□□ -1.25
CCDC7-209ENST00000539197 DHCR24Q15392 516 aa7.26□□□□□ -1.25
CCDC7-209ENST00000539197 FAM180AQ6UWF9 173 aa7.26□□□□□ -1.25
CCDC7-209ENST00000539197 SPATA5L1Q9BVQ7 753 aa7.26□□□□□ -1.25
CCDC7-209ENST00000539197 IFT22Q9H7X7 185 aa7.26□□□□□ -1.25
CCDC7-209ENST00000539197 BCO1Q9HAY6 547 aa7.26□□□□□ -1.25
CCDC7-209ENST00000539197 MAPRE3Q9UPY8 281 aa7.26□□□□□ -1.25
CCDC7-209ENST00000539197 SIK3Q9Y2K2 1263 aa7.26□□□□□ -1.25
CCDC7-209ENST00000539197 ULK1O75385 1050 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 C1RP00736 705 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 RAP2AP10114 183 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 FPR1P21462 350 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 PPP3CAQ08209 521 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 ADRM1Q16186 407 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 DRC7Q8IY82 874 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 NACC2Q96BF6 587 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 RNF31Q96EP0 1072 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 FUBP3Q96I24 572 aaKnown RBP eCLIP7.25□□□□□ -1.25
CCDC7-209ENST00000539197 MYOCQ99972 504 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 LRFN3Q9BTN0 628 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 DUSP26Q9BV47 211 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 USP25Q9UHP3 1055 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 SCOCQ9UIL1 159 aa7.25□□□□□ -1.25
CCDC7-209ENST00000539197 A0A1B0GTW7 788 aa7.24□□□□□ -1.25
CCDC7-209ENST00000539197 ECHS1P30084 290 aa7.24□□□□□ -1.25
CCDC7-209ENST00000539197 ALDH1A3P47895 512 aa7.24□□□□□ -1.25
CCDC7-209ENST00000539197 SP140Q13342 867 aa7.24□□□□□ -1.25
CCDC7-209ENST00000539197 THNSL2Q86YJ6 484 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms