RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 ZNF365Q70YC5 407 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 MAMDC2Q7Z304 686 aaPredicted RBP6.97□□□□□ -1.29
SDC2-208ENST00000523877 ADCK1Q86TW2 530 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 ARHGAP18Q8N392 663 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 NIPA2Q8N8Q9 360 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 ANKS4BQ8N8V4 417 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 AVL9Q8NBF6 648 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 C1orf216Q8TAB5 229 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 NKX2-3Q8TAU0 364 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 NSUN6Q8TEA1 469 aaKnown RBP6.97□□□□□ -1.29
SDC2-208ENST00000523877 FBF1Q8TES7 1133 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 SEPT1Q8WYJ6 367 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 GPRASP2Q96D09 838 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 ITPKCQ96DU7 683 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 C19orf60Q96EN9 201 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 ZNF845Q96IR2 970 aaPredicted RBP6.97□□□□□ -1.29
SDC2-208ENST00000523877 TCEANC2Q96MN5 208 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 TSNARE1Q96NA8 513 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 ANKRD27Q96NW4 1050 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 TBCDQ9BTW9 1192 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 DDX23Q9BUQ8 820 aaKnown RBP6.97□□□□□ -1.29
SDC2-208ENST00000523877 C9orf16Q9BUW7 83 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.97□□□□□ -1.29
SDC2-208ENST00000523877 C2orf40Q9H1Z8 148 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 ANTXR1Q9H6X2 564 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 LRRC19Q9H756 370 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 DCTPP1Q9H773 170 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 LY9Q9HBG7 655 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 RNF19AQ9NV58 838 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 NMRK1Q9NWW6 199 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 IL37Q9NZH6 218 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 HSPBP1Q9NZL4 362 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 COX16Q9P0S2 106 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 GPR34Q9UPC5 381 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 ZFP37Q9Y6Q3 630 aaPredicted RBP6.97□□□□□ -1.29
SDC2-208ENST00000523877 CAPN7Q9Y6W3 813 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 ELP1O95163 1332 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 KDM2BQ8NHM5 1336 aa6.97□□□□□ -1.29
SDC2-208ENST00000523877 ERICH3Q5RHP9 1530 aa6.96□□□□□ -1.29
SDC2-208ENST00000523877 C15orf38-AP3S2A0A0A6YYH1 394 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 SH3D21A4FU49 640 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 LRRC14BA6NHZ5 514 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 WASLO00401 505 aaPredicted RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 CDK2AP1O14519 115 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 PMM2O15305 246 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 ZSCAN12O43309 604 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 KLF4O43474 513 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 CCNT1O60563 726 aaKnown RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 PDE8AO60658 829 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 NPTXRO95502 500 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 CYP2E1P05181 493 aaPredicted RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 ABCB1P08183 1280 aaPredicted RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 NR3C2P08235 984 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 NAGAP17050 411 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 M6PRP20645 277 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 TBXAS1P24557 533 aaPredicted RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 HMOX2P30519 316 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 GBP1P32455 592 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 SERPINB6P35237 376 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 PPP1R2P41236 205 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 GRK6P43250 576 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 IREB2P48200 963 aaKnown RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 SCNN1GP51170 649 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 ALDH3A2P51648 485 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 ARSDP51689 593 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 AK2P54819 239 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 TGFB2P61812 414 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 IFFO1Q0D2I5 559 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 CSTF3Q12996 717 aaKnown RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 DNAJC3Q13217 504 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 KRT32Q14532 448 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 PTPAQ15257 358 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 HADHQ16836 314 aaKnown RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 C21orf62-AS1Q17RA5 79 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 ALG11Q2TAA5 492 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 GRTP1Q5TC63 336 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 VWA5B1Q5TIE3 1220 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 IL23RQ5VWK5 629 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 PPP1R2P3Q6NXS1 205 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 WDR73Q6P4I2 378 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 ERICH5Q6P6B1 374 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 AAGABQ6PD74 315 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 C3orf62Q6ZUJ4 267 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 UNC13DQ70J99 1090 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 GPR142Q7Z601 462 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 ERO1BQ86YB8 467 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 THNSL2Q86YJ6 484 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 WDR49Q8IV35 697 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 UBR7Q8N806 425 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 PPM1NQ8N819 430 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 OR56B2PQ8NGI1 322 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 PIP4K2CQ8TBX8 421 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 OSCP1Q8WVF1 389 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 KAT2BQ92831 832 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 GFM2Q969S9 779 aaKnown RBP6.96□□□□□ -1.3
SDC2-208ENST00000523877 TTC17Q96AE7 1141 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 HDAC11Q96DB2 347 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 ERO1AQ96HE7 468 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 C7orf34Q96L11 122 aa6.96□□□□□ -1.3
SDC2-208ENST00000523877 CFAP57Q96MR6 1250 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms