RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 PTPN14Q15678 1187 aa17.92■□□□□ 0.46
PABPC1-221ENST00000522720 ZC2HC1CQ53FD0 456 aaPredicted RBP17.92■□□□□ 0.46
PABPC1-221ENST00000522720 RESP18Q5W5W9 173 aa17.92■□□□□ 0.46
PABPC1-221ENST00000522720 RABGGTAQ92696 567 aa17.92■□□□□ 0.46
PABPC1-221ENST00000522720 DHX58Q96C10 678 aa17.92■□□□□ 0.46
PABPC1-221ENST00000522720 PPP1R10Q96QC0 940 aaKnown RBP17.92■□□□□ 0.46
PABPC1-221ENST00000522720 PAAF1Q9BRP4 392 aa17.92■□□□□ 0.46
PABPC1-221ENST00000522720 HAPLN2Q9GZV7 340 aa17.92■□□□□ 0.46
PABPC1-221ENST00000522720 TNMDQ9H2S6 317 aa17.92■□□□□ 0.46
PABPC1-221ENST00000522720 FAM13BQ9NYF5 915 aa17.92■□□□□ 0.46
PABPC1-221ENST00000522720 CACNG4Q9UBN1 327 aa17.92■□□□□ 0.46
PABPC1-221ENST00000522720 CD207Q9UJ71 328 aa17.92■□□□□ 0.46
PABPC1-221ENST00000522720 ADAM28Q9UKQ2 775 aa17.92■□□□□ 0.46
PABPC1-221ENST00000522720 ATP6V1DQ9Y5K8 247 aa17.92■□□□□ 0.46
PABPC1-221ENST00000522720 FRMD3A2A2Y4 597 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 CASTOR2A6NHX0 329 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 HNRNPDLO14979 420 aaKnown RBP17.91■□□□□ 0.46
PABPC1-221ENST00000522720 POLR2DO15514 142 aaKnown RBP17.91■□□□□ 0.46
PABPC1-221ENST00000522720 TADA2AO75478 443 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 IDEP14735 1019 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 CA8P35219 290 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 MATR3P43243 847 aaKnown RBP eCLIP17.91■□□□□ 0.46
PABPC1-221ENST00000522720 KRT85P78386 507 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 COASYQ13057 564 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 HSP90AA2PQ14568 343 aaPredicted RBP17.91■□□□□ 0.46
PABPC1-221ENST00000522720 CLUL1Q15846 466 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 HERC4Q5GLZ8 1057 aaPredicted RBP17.91■□□□□ 0.46
PABPC1-221ENST00000522720 GLRA4Q5JXX5 417 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 TAS1R1Q7RTX1 841 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 MAP4K3Q8IVH8 894 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 LEO1Q8WVC0 666 aaPredicted RBP17.91■□□□□ 0.46
PABPC1-221ENST00000522720 STAMQ92783 540 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 SNX27Q96L92 541 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 NECAB3Q96P71 396 aaPredicted RBP17.91■□□□□ 0.46
PABPC1-221ENST00000522720 HERC2P3Q9BVR0 1158 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 STRA6Q9BX79 667 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 GPR62Q9BZJ7 368 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 LRRC27Q9C0I9 530 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 MRPL44Q9H9J2 332 aaKnown RBP17.91■□□□□ 0.46
PABPC1-221ENST00000522720 MRPL17Q9NRX2 175 aaKnown RBP17.91■□□□□ 0.46
PABPC1-221ENST00000522720 BARX2Q9UMQ3 279 aaPredicted RBP17.91■□□□□ 0.46
PABPC1-221ENST00000522720 FAM50BQ9Y247 325 aa17.91■□□□□ 0.46
PABPC1-221ENST00000522720 A0A0B4J269 797 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 MEFVO15553 781 aaPredicted RBP17.9■□□□□ 0.46
PABPC1-221ENST00000522720 PPP1R37O75864 691 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 SRGAP2BP0DMP2 458 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 IL9P15248 144 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 KCNE1P15382 129 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 AMPD3Q01432 767 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 SMAD4Q13485 552 aaKnown RBP17.9■□□□□ 0.46
PABPC1-221ENST00000522720 KYAT1Q16773 422 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 SLC10A6Q3KNW5 377 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 SEZ6Q53EL9 994 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 KIAA0319Q5VV43 1072 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 FUT10Q6P4F1 479 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 SLC39A4Q6P5W5 647 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 TMEM87AQ8NBN3 555 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 HVCN1Q96D96 273 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 CHAMP1Q96JM3 812 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 SPATA32Q96LK8 384 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 ZMAT2Q96NC0 199 aaKnown RBP17.9■□□□□ 0.46
PABPC1-221ENST00000522720 EMILIN2Q9BXX0 1053 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 OLFML3Q9NRN5 406 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 CHST7Q9NS84 486 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 PANK4Q9NVE7 773 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 CNTN3Q9P232 1028 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 SSX2IPQ9Y2D8 614 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 HCFC2Q9Y5Z7 792 aa17.9■□□□□ 0.46
PABPC1-221ENST00000522720 MBTPS2O43462 519 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 URODP06132 367 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 CLTAP09496 248 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 GLUD2P49448 558 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 USP41Q3LFD5 358 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 LLGL2Q6P1M3 1020 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 CNNM4Q6P4Q7 775 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 CCDC65Q8IXS2 484 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 GPR65Q8IYL9 337 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 SMRP1Q8NCR6 262 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 UROC1Q96N76 676 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 KLHL5Q96PQ7 755 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 PYM1Q9BRP8 204 aaKnown RBP17.89■□□□□ 0.45
PABPC1-221ENST00000522720 TRIM9Q9C026 710 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 PLEKHA5Q9HAU0 1116 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 MAGEF1Q9HAY2 307 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 TSHZ2Q9NRE2 1034 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 SLC38A7Q9NVC3 462 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 TBC1D7Q9P0N9 293 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 KCNH3Q9ULD8 1083 aa17.89■□□□□ 0.45
PABPC1-221ENST00000522720 ANKRD63C9JTQ0 380 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 TMEM189-UBE2V1I3L0A0 370 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 OGTO15294 1046 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 FAM189A1O60320 539 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 KIF4AO95239 1232 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 CNPP09543 421 aaKnown RBP17.88■□□□□ 0.45
PABPC1-221ENST00000522720 HOXB8P17481 243 aaPredicted RBP17.88■□□□□ 0.45
PABPC1-221ENST00000522720 CMA1P23946 247 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 DSG1Q02413 1049 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 SMAD2Q15796 467 aaKnown RBP17.88■□□□□ 0.45
PABPC1-221ENST00000522720 UPP1Q16831 310 aa17.88■□□□□ 0.45
PABPC1-221ENST00000522720 ADALQ6DHV7 355 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms