RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 CCDC170Q8IYT3 715 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 CEP120Q8N960 986 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 TAS1R2Q8TE23 839 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 SH3TC2Q8TF17 1288 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 FAM212AQ96EL1 285 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 PPP1R13BQ96KQ4 1090 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 TSEN34Q9BSV6 310 aaKnown RBP13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 DESI2Q9BSY9 194 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 NHEJ1Q9H9Q4 299 aaPredicted RBP13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 RPF1Q9H9Y2 349 aaKnown RBP13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 RAB20Q9NX57 234 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 WBP1LQ9NX94 342 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 DNAJC12Q9UKB3 198 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 AJAP1Q9UKB5 411 aaPredicted RBP13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 PPP2R2CQ9Y2T4 447 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 COQ4Q9Y3A0 265 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 PTPRJQ12913 1337 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 A0A1B0GUA9 196 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 IL18RAPO95256 599 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 SERPING1P05155 500 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 CLTAP09496 248 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 CCDC175P0C221 793 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 PIK3CAP42336 1068 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 AP3M2P53677 418 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 JAM2P57087 298 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 MRPS6P82932 125 aaKnown RBP13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 BIRC3Q13489 604 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 ITGA7Q13683 1181 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 ENOX2Q16206 610 aaKnown RBP13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 ZACNQ401N2 412 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 SLC9C1Q4G0N8 1177 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 TDRD12Q587J7 1177 aaKnown RBP13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 NOTUMQ6P988 496 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 C15orf39Q6ZRI6 1047 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 ZNF516Q92618 1163 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 SEMA4DQ92854 862 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 CCDC42Q96M95 316 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 GLT1D1Q96MS3 346 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 STK33Q9BYT3 514 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 CELF4Q9BZC1 486 aaKnown RBP13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 PDCL3Q9H2J4 239 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 DEF6Q9H4E7 631 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 AIPL1Q9NZN9 384 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 ARHGAP20Q9P2F6 1191 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 TRPV2Q9Y5S1 764 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 ADGRG1Q9Y653 693 aa13.63□□□□□ -0.23
LYSMD3-204ENST00000509384 SCN10AQ9Y5Y9 1956 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 CENPFP49454 3210 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 GRIN2DO15399 1336 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 KIF2AO00139 706 aaPredicted RBP13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 NDUFA10O95299 355 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 IPO7O95373 1038 aaKnown RBP13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 C4BPAP04003 597 aaKnown RBP13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 TUBB4AP04350 444 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 STAG3L1P0CL83 205 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 CXCL8P10145 99 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 AXLP30530 894 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 STAT1P42224 750 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 POU5F1Q01860 360 aaKnown RBP13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 ARID5AQ03989 594 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 PTPN11Q06124 597 aaPredicted RBP13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 PTGISQ16647 500 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 TDRD10Q5VZ19 366 aaKnown RBP13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 PHLDB3Q6NSJ2 640 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 SLC27A1Q6PCB7 646 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 FMNL3Q8IVF7 1028 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 ARHGEF19Q8IW93 802 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 ARRDC4Q8NCT1 418 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 TMEM40Q8WWA1 233 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 FAM84AQ96KN4 292 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 NT5C1BQ96P26 610 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 UBE2TQ9NPD8 197 aaPredicted RBP13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 NOD1Q9Y239 953 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 PTPN22Q9Y2R2 807 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 CDY2AQ9Y6F7 541 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 EPN1Q9Y6I3 576 aaPredicted RBP13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 EVPLQ92817 2033 aa13.62□□□□□ -0.23
LYSMD3-204ENST00000509384 SSU72P8A0A1W2PR75 194 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 KBTBD13C9JR72 458 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 F8VZ95 297 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 ZC3H11AO75152 810 aaKnown RBP eCLIP13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 PHACTR2O75167 634 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 LRRN2O75325 713 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 NPTXRO95502 500 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 HLA-DRAP01903 254 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 PLEKP08567 350 aaPredicted RBP13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 HOXA11P31270 313 aaPredicted RBP13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 EIF4A3P38919 411 aaKnown RBP13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 KLHL30Q0D2K2 578 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 DRAP1Q14919 205 aaPredicted RBP13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 HGSNATQ68CP4 663 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 RPAINQ86UA6 219 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 TMEM192Q8IY95 271 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 PPM1KQ8N3J5 372 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 ACRBPQ8NEB7 543 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 OR5B17Q8NGF7 314 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 WNT8BQ93098 351 aa13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 C16orf45Q96MC5 204 aaPredicted RBP13.61□□□□□ -0.23
LYSMD3-204ENST00000509384 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms