RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SFXN1Q9H9B4 322 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 CHST7Q9NS84 486 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 MTMR6Q9Y217 621 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 C2CD4DB7Z1M9 353 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 GLUD1P00367 558 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 ADH1AP07327 375 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 MAPTP10636 758 aaKnown RBP15.37■□□□□ 0.05
VTI1A-206ENST00000489142 GRM5P41594 1212 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 MTHFRP42898 656 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 STRN3Q13033 797 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 USP41Q3LFD5 358 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 FAM171A1Q5VUB5 890 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 MPZL3Q6UWV2 235 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 APBB1IPQ7Z5R6 666 aaPredicted RBP15.37■□□□□ 0.05
VTI1A-206ENST00000489142 TMEM130Q8N3G9 435 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 RAD54LQ92698 747 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 RIPOR3Q96MK2 946 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 PPP1R10Q96QC0 940 aaKnown RBP15.37■□□□□ 0.05
VTI1A-206ENST00000489142 CCDC94Q9BW85 323 aaPredicted RBP15.37■□□□□ 0.05
VTI1A-206ENST00000489142 ZHX3Q9H4I2 956 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 C17orf75Q9HAS0 396 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 FBXO2Q9UK22 296 aaPredicted RBP15.37■□□□□ 0.05
VTI1A-206ENST00000489142 RBM19Q9Y4C8 960 aaKnown RBP15.37■□□□□ 0.05
VTI1A-206ENST00000489142 GTF3C3Q9Y5Q9 886 aa15.37■□□□□ 0.05
VTI1A-206ENST00000489142 SF3B1O75533 1304 aaKnown RBP eCLIP15.37■□□□□ 0.05
VTI1A-206ENST00000489142 TECTAO75443 2155 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 MYO10Q9HD67 2058 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 SMIM28A0A1B0GU29 152 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 I3L4J1 428 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 MEFVO15553 781 aaPredicted RBP15.36■□□□□ 0.05
VTI1A-206ENST00000489142 KRT18P05783 430 aaKnown RBP15.36■□□□□ 0.05
VTI1A-206ENST00000489142 PROZP22891 400 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 MATR3P43243 847 aaKnown RBP eCLIP15.36■□□□□ 0.05
VTI1A-206ENST00000489142 CLCNKBP51801 687 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 SMTNP53814 917 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 YARSP54577 528 aaKnown RBP15.36■□□□□ 0.05
VTI1A-206ENST00000489142 SOX4Q06945 474 aaPredicted RBP15.36■□□□□ 0.05
VTI1A-206ENST00000489142 FOXD4L5Q5VV16 416 aaPredicted RBP15.36■□□□□ 0.05
VTI1A-206ENST00000489142 C3orf58Q8NDZ4 430 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 SPIRE2Q8WWL2 714 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 FOXD4L4Q8WXT5 416 aaPredicted RBP15.36■□□□□ 0.05
VTI1A-206ENST00000489142 BICD1Q96G01 975 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 INTS4Q96HW7 963 aaKnown RBP15.36■□□□□ 0.05
VTI1A-206ENST00000489142 NECTIN4Q96NY8 510 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 HAPLN2Q9GZV7 340 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 RXFP1Q9HBX9 757 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 KCND2Q9NZV8 630 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 SSX2IPQ9Y2D8 614 aa15.36■□□□□ 0.05
VTI1A-206ENST00000489142 PRR33A8MZF0 331 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 K7ENM7 598 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 TGM5O43548 720 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 STX6O43752 255 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 RFPL2O75678 378 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 FAM13AO94988 1023 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 MCF2P10911 925 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 NOLC1Q14978 699 aaKnown RBP eCLIP15.35■□□□□ 0.05
VTI1A-206ENST00000489142 ATAT1Q5SQI0 421 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 HFE2Q6ZVN8 426 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 MYCT1Q8N699 235 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 C18orf25Q96B23 403 aaPredicted RBP15.35■□□□□ 0.05
VTI1A-206ENST00000489142 SNX27Q96L92 541 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 ZMAT2Q96NC0 199 aaKnown RBP15.35■□□□□ 0.05
VTI1A-206ENST00000489142 ACAP3Q96P50 834 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 USP28Q96RU2 1077 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 NTPCRQ9BSD7 190 aaKnown RBP15.35■□□□□ 0.05
VTI1A-206ENST00000489142 TTPALQ9BTX7 342 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 SMOC2Q9H3U7 446 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 NR2E1Q9Y466 385 aa15.35■□□□□ 0.05
VTI1A-206ENST00000489142 DOCK6Q96HP0 2047 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 CCDC195A0A1B0GUA6 201 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 ADAM12O43184 909 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 SLC26A4O43511 780 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 TOM1L1O75674 476 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 ASGR2P07307 311 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 BRCC3P46736 316 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 NCKAP1LP55160 1127 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 ZXDAP98168 799 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 PSMD5Q16401 504 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 CD300LGQ6UXG3 332 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 ALKAL1Q6UXT8 129 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 HAUS6Q7Z4H7 955 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 GPR149Q86SP6 731 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 KCTD17Q8N5Z5 321 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 LARP4BQ92615 738 aaKnown RBP15.34■□□□□ 0.05
VTI1A-206ENST00000489142 EDAQ92838 391 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 CCSER1Q9C0I3 900 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 TOPORSQ9NS56 1045 aaPredicted RBP15.34■□□□□ 0.05
VTI1A-206ENST00000489142 LARSQ9P2J5 1176 aaKnown RBP15.34■□□□□ 0.05
VTI1A-206ENST00000489142 ODF2LQ9ULJ1 636 aa15.34■□□□□ 0.05
VTI1A-206ENST00000489142 TBCAO75347 108 aaKnown RBP15.33■□□□□ 0.04
VTI1A-206ENST00000489142 B3GAT3O94766 335 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 BRD1O95696 1058 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 CXCL8P10145 99 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 NMT1P30419 496 aaKnown RBP15.33■□□□□ 0.04
VTI1A-206ENST00000489142 SPAG1Q07617 926 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 PTPN21Q16825 1174 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 UPP1Q16831 310 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 ZBTB41Q5SVQ8 909 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 DYMQ7RTS9 669 aa15.33■□□□□ 0.04
VTI1A-206ENST00000489142 TDRD5Q8NAT2 981 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms