RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 MTSS1LQ765P7 747 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 C4orf32Q8N8J7 132 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 APPL2Q8NEU8 664 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 PIK3R5Q8WYR1 880 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 SMG7Q92540 1137 aaKnown RBP8.19□□□□□ -1.1
CPNE1-226ENST00000486021 INTS4Q96HW7 963 aaKnown RBP8.19□□□□□ -1.1
CPNE1-226ENST00000486021 ZFP42Q96MM3 310 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 TBC1D32Q96NH3 1257 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 KIF2CQ99661 725 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 ACO2Q99798 780 aaKnown RBP8.19□□□□□ -1.1
CPNE1-226ENST00000486021 CCDC113Q9H0I3 377 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 ZSCAN16Q9H4T2 348 aaPredicted RBP8.19□□□□□ -1.1
CPNE1-226ENST00000486021 POMKQ9H5K3 350 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 PLEKHA5Q9HAU0 1116 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 WDR6Q9NNW5 1121 aaKnown RBP8.19□□□□□ -1.1
CPNE1-226ENST00000486021 GPRC5CQ9NQ84 441 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 KLK14Q9P0G3 267 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 GDAQ9Y2T3 454 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 A0A0C4DFX4 3053 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 KMT2EQ8IZD2 1858 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 VPS37CA5D8V6 355 aaPredicted RBP8.18□□□□□ -1.1
CPNE1-226ENST00000486021 SYN3O14994 580 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 LILRB3O75022 631 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 B3GAT3O94766 335 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 HSP90AA1P07900 732 aaKnown RBP8.18□□□□□ -1.1
CPNE1-226ENST00000486021 PLA2G4BP0C869 781 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 LIG4P49917 911 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 PPP2R3AQ06190 1150 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 TDGQ13569 410 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 NOLC1Q14978 699 aaKnown RBP eCLIP8.18□□□□□ -1.1
CPNE1-226ENST00000486021 POSTNQ15063 836 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 SLFN12LQ6IEE8 588 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 STXBP4Q6ZWJ1 553 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 C1orf186Q6ZWK4 172 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 TMEM173Q86WV6 379 aaPredicted RBP8.18□□□□□ -1.1
CPNE1-226ENST00000486021 CDR2LQ86X02 465 aaPredicted RBP8.18□□□□□ -1.1
CPNE1-226ENST00000486021 RNF168Q8IYW5 571 aaPredicted RBP8.18□□□□□ -1.1
CPNE1-226ENST00000486021 KREMEN2Q8NCW0 462 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 AUTS2Q8WXX7 1259 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 BORCS6Q96GS4 357 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 SHDQ96IW2 340 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 RTP3Q9BQQ7 232 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 PRKD2Q9BZL6 878 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 RNF39Q9H2S5 420 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 PARVGQ9HBI0 331 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 MARCH5Q9NX47 278 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 MIOSQ9NXC5 875 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 ARHGAP28Q9P2N2 729 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 STK17AQ9UEE5 414 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 FBXL21Q9UKT6 434 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 EXOC7Q9UPT5 735 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 R3HCC1Q9Y3T6 440 aaKnown RBP8.18□□□□□ -1.1
CPNE1-226ENST00000486021 VWA8A3KMH1 1905 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 CLUHO75153 1309 aa8.18□□□□□ -1.1
CPNE1-226ENST00000486021 MIA3Q5JRA6 1907 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 A0A087WWV3 80 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 CASTOR2A6NHX0 329 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 C2CD4DB7Z1M9 353 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 STK25O00506 426 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 WNT7AO00755 349 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 ZNF197O14709 1029 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 SLC16A4O15374 487 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 DTNBO60941 627 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 ZMYND10O75800 440 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 BRD1O95696 1058 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 LDHAP00338 332 aaKnown RBP8.17□□□□□ -1.1
CPNE1-226ENST00000486021 LRG1P02750 347 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 POU2F2P09086 479 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 TOB1P50616 345 aaPredicted RBP8.17□□□□□ -1.1
CPNE1-226ENST00000486021 CLCN5P51795 746 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 AMPD3Q01432 767 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 POU5F1Q01860 360 aaKnown RBP8.17□□□□□ -1.1
CPNE1-226ENST00000486021 ALCAMQ13740 583 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 TPGS2Q68CL5 300 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 CCDC73Q6ZRK6 1079 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 HFE2Q6ZVN8 426 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 PALB2Q86YC2 1186 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 MYCT1Q8N699 235 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 LEMD2Q8NC56 503 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 LARP4BQ92615 738 aaKnown RBP8.17□□□□□ -1.1
CPNE1-226ENST00000486021 KHSRPQ92945 711 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPNE1-226ENST00000486021 HVCN1Q96D96 273 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 GPR62Q9BZJ7 368 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 RPF1Q9H9Y2 349 aaKnown RBP8.17□□□□□ -1.1
CPNE1-226ENST00000486021 C11orf16Q9NQ32 467 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 SEL1LQ9UBV2 794 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 LIMD1Q9UGP4 676 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 UBQLN1Q9UMX0 589 aaKnown RBP8.17□□□□□ -1.1
CPNE1-226ENST00000486021 BACE2Q9Y5Z0 518 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 CUL9Q8IWT3 2517 aa8.17□□□□□ -1.1
CPNE1-226ENST00000486021 SMIM28A0A1B0GU29 152 aa8.16□□□□□ -1.1
CPNE1-226ENST00000486021 XIRP2A4UGR9 3374 aa8.16□□□□□ -1.1
CPNE1-226ENST00000486021 K7ENM7 598 aa8.16□□□□□ -1.1
CPNE1-226ENST00000486021 HNRNPDLO14979 420 aaKnown RBP8.16□□□□□ -1.1
CPNE1-226ENST00000486021 NCAM2O15394 837 aa8.16□□□□□ -1.1
CPNE1-226ENST00000486021 TGM5O43548 720 aa8.16□□□□□ -1.1
CPNE1-226ENST00000486021 TRAK2O60296 914 aa8.16□□□□□ -1.1
CPNE1-226ENST00000486021 CLTAP09496 248 aa8.16□□□□□ -1.1
CPNE1-226ENST00000486021 MAPTP10636 758 aaKnown RBP8.16□□□□□ -1.1
CPNE1-226ENST00000486021 KCNE1P15382 129 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms