RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 HSP90AA2PQ14568 343 aaPredicted RBP16.72■□□□□ 0.27
GYPC-205ENST00000464053 MTF1Q14872 753 aa16.72■□□□□ 0.27
GYPC-205ENST00000464053 PCBP1Q15365 356 aaKnown RBP eCLIP16.72■□□□□ 0.27
GYPC-205ENST00000464053 TRIM71Q2Q1W2 868 aaKnown RBP16.72■□□□□ 0.27
GYPC-205ENST00000464053 SCARA3Q6AZY7 606 aa16.72■□□□□ 0.27
GYPC-205ENST00000464053 IQCEQ6IPM2 695 aa16.72■□□□□ 0.27
GYPC-205ENST00000464053 PDXDC1Q6P996 788 aa16.72■□□□□ 0.27
GYPC-205ENST00000464053 FAM228AQ86W67 206 aa16.72■□□□□ 0.27
GYPC-205ENST00000464053 ZNF397Q8NF99 534 aaPredicted RBP16.72■□□□□ 0.27
GYPC-205ENST00000464053 OR5B17Q8NGF7 314 aa16.72■□□□□ 0.27
GYPC-205ENST00000464053 TAS1R2Q8TE23 839 aa16.72■□□□□ 0.27
GYPC-205ENST00000464053 ELMO3Q96BJ8 720 aa16.72■□□□□ 0.27
GYPC-205ENST00000464053 CHP1Q99653 195 aa16.72■□□□□ 0.27
GYPC-205ENST00000464053 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.72■□□□□ 0.273e-6■■■■■ 65.1
GYPC-205ENST00000464053 OGDHLQ9ULD0 1010 aa16.72■□□□□ 0.27
GYPC-205ENST00000464053 NOD1Q9Y239 953 aa16.72■□□□□ 0.27
GYPC-205ENST00000464053 COQ4Q9Y3A0 265 aa16.72■□□□□ 0.27
GYPC-205ENST00000464053 A0A0U1RQG5 324 aaPredicted RBP16.71■□□□□ 0.27
GYPC-205ENST00000464053 C4BPAP04003 597 aaKnown RBP16.71■□□□□ 0.27
GYPC-205ENST00000464053 MSNP26038 577 aaKnown RBP16.71■□□□□ 0.27
GYPC-205ENST00000464053 NCBP1Q09161 790 aaKnown RBP16.71■□□□□ 0.27
GYPC-205ENST00000464053 CETN1Q12798 172 aa16.71■□□□□ 0.27
GYPC-205ENST00000464053 TDRD10Q5VZ19 366 aaKnown RBP16.71■□□□□ 0.27
GYPC-205ENST00000464053 PHLDB3Q6NSJ2 640 aa16.71■□□□□ 0.27
GYPC-205ENST00000464053 NAA15Q9BXJ9 866 aaKnown RBP16.71■□□□□ 0.27
GYPC-205ENST00000464053 PIN4Q9Y237 131 aaKnown RBP16.71■□□□□ 0.27
GYPC-205ENST00000464053 ARVCFO00192 962 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 CLTAP09496 248 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 ZACNQ401N2 412 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 NOTUMQ6P988 496 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 SLC27A1Q6PCB7 646 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 RAD9BQ6WBX8 426 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 ARHGEF19Q8IW93 802 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 ADPGKQ9BRR6 497 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 RPF1Q9H9Y2 349 aaKnown RBP16.7■□□□□ 0.26
GYPC-205ENST00000464053 FBXL5Q9UKA1 691 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 LACTBL1A8MY62 500 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 VNN1O95497 513 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 AXLP30530 894 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 HNRNPH3P31942 346 aaKnown RBP16.7■□□□□ 0.26
GYPC-205ENST00000464053 MEA1Q16626 185 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 SLC10A6Q3KNW5 377 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 DCAF4L1Q3SXM0 396 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 FBXO46Q6PJ61 603 aaPredicted RBP16.7■□□□□ 0.26
GYPC-205ENST00000464053 EFCAB13Q8IY85 973 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 FBXL13Q8NEE6 735 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 RAB20Q9NX57 234 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 APEX2Q9UBZ4 518 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 PLAGL2Q9UPG8 496 aa16.7■□□□□ 0.26
GYPC-205ENST00000464053 ARHGAP6O43182 974 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 NRDCO43847 1150 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 CDK7P50613 346 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 UBXN11Q5T124 520 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 ZNF618Q5T7W0 954 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 WDR49Q8IV35 697 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 ZNF333Q96JL9 665 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 PI4K2AQ9BTU6 479 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 CXCL16Q9H2A7 254 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 AGO3Q9H9G7 860 aaKnown RBP16.69■□□□□ 0.26
GYPC-205ENST00000464053 DNAJC12Q9UKB3 198 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 HES2Q9Y543 173 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 CITO14578 2027 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 TRIP11Q15643 1979 aa16.69■□□□□ 0.26
GYPC-205ENST00000464053 RPS6KA5O75582 802 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 RPLP2P05387 115 aaKnown RBP16.68■□□□□ 0.26
GYPC-205ENST00000464053 PLEKP08567 350 aaPredicted RBP16.68■□□□□ 0.26
GYPC-205ENST00000464053 PNMA6AP0CW24 399 aaPredicted RBP16.68■□□□□ 0.26
GYPC-205ENST00000464053 GRM5P41594 1212 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 MNX1P50219 401 aaPredicted RBP16.68■□□□□ 0.26
GYPC-205ENST00000464053 JAM2P57087 298 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 BIRC3Q13489 604 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 RAPGEF1Q13905 1077 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 TSR1Q2NL82 804 aaKnown RBP16.68■□□□□ 0.26
GYPC-205ENST00000464053 CYP26C1Q6V0L0 522 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 TOGARAM2Q6ZUX3 1019 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 TMTC1Q8IUR5 882 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 TMEM130Q8N3G9 435 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 MTMR12Q9C0I1 747 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 NXF3Q9H4D5 531 aaKnown RBP16.68■□□□□ 0.26
GYPC-205ENST00000464053 SNTG2Q9NY99 539 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 ST3GAL5Q9UNP4 418 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 MROH7Q68CQ1 1323 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 IL18RAPO95256 599 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 HLA-DRAP01903 254 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 NFICP08651 508 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 HSPA1AP0DMV8 641 aaKnown RBP16.68■□□□□ 0.26
GYPC-205ENST00000464053 HSPA1BP0DMV9 641 aaKnown RBP16.68■□□□□ 0.26
GYPC-205ENST00000464053 NFX1Q12986 1120 aaKnown RBP16.68■□□□□ 0.26
GYPC-205ENST00000464053 SURF1Q15526 300 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 FAM26DQ5JW98 314 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 SFMBT2Q5VUG0 894 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 KAT5Q92993 513 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 ACAP3Q96P50 834 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 GPR88Q9GZN0 384 aa16.68■□□□□ 0.26
GYPC-205ENST00000464053 UBE2TQ9NPD8 197 aaPredicted RBP16.68■□□□□ 0.26
GYPC-205ENST00000464053 USP27XA6NNY8 438 aa16.67■□□□□ 0.26
GYPC-205ENST00000464053 CST3P01034 146 aaPredicted RBP16.67■□□□□ 0.26
GYPC-205ENST00000464053 GHRP10912 638 aa16.67■□□□□ 0.26
GYPC-205ENST00000464053 CKBP12277 381 aa16.67■□□□□ 0.26
GYPC-205ENST00000464053 TFAMQ00059 246 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms